EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000011190 (Gene tree)
Gene ID: -
Gene Symbol: AFF4
Alias: AF5Q31|MCEF
Full Name: AF4/FMR2 family member 4
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 65645 bases
Position: chrGeneScaffold_569:2092-67736
Accession: 17869
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000010140	AF-4	PF05110.13	1.2e-301	1	3
ENSSARP00000010140	AF-4	PF05110.13	1.2e-301	2	3
ENSSARP00000010140	AF-4	PF05110.13	1.2e-301	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000011234	AFF4-201	3477	-	ENSSARP00000010140	1158 (aa)	-	UPI0001581206

Gene Model

Click here to download ENSSARG00000011190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000011190's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000011190	AFF4	77	86.076	ENSG00000072364	AFF4	83	95.935	Homo_sapiens
ENSSARG00000011190	AFF4	79	66.076	ENSAPOG00000006096	aff4	78	64.899	Acanthochromis_polyacanthus
ENSSARG00000011190	AFF4	77	88.608	ENSAMEG00000017764	AFF4	78	90.184	Ailuropoda_melanoleuca
ENSSARG00000011190	AFF4	54	61.404	ENSAMEG00000003337	AFF1	50	60.000	Ailuropoda_melanoleuca
ENSSARG00000011190	AFF4	79	66.076	ENSAOCG00000008476	aff4	78	64.394	Amphiprion_ocellaris
ENSSARG00000011190	AFF4	79	66.076	ENSAPEG00000018275	aff4	78	64.646	Amphiprion_percula
ENSSARG00000011190	AFF4	79	65.570	ENSATEG00000010963	aff4	77	63.889	Anabas_testudineus
ENSSARG00000011190	AFF4	67	50.000	ENSAPLG00000004059	AFF1	54	59.677	Anas_platyrhynchos
ENSSARG00000011190	AFF4	78	79.661	ENSAPLG00000011166	AFF4	78	80.226	Anas_platyrhynchos
ENSSARG00000011190	AFF4	78	77.907	ENSACAG00000022605	AFF4	77	79.141	Anolis_carolinensis
ENSSARG00000011190	AFF4	77	85.443	ENSANAG00000037761	AFF4	79	87.117	Aotus_nancymaae
ENSSARG00000011190	AFF4	75	69.341	ENSACLG00000011879	aff4	76	63.566	Astatotilapia_calliptera
ENSSARG00000011190	AFF4	72	70.440	ENSAMXG00000020137	aff4	79	63.959	Astyanax_mexicanus
ENSSARG00000011190	AFF4	51	51.200	ENSAMXG00000000387	aff2	63	52.529	Astyanax_mexicanus
ENSSARG00000011190	AFF4	77	89.873	ENSBTAG00000009482	AFF4	78	90.184	Bos_taurus
ENSSARG00000011190	AFF4	77	85.443	ENSCJAG00000013322	AFF4	79	87.117	Callithrix_jacchus
ENSSARG00000011190	AFF4	50	50.581	ENSCAFG00000009476	AFF1	53	56.944	Canis_familiaris
ENSSARG00000011190	AFF4	77	89.873	ENSCAFG00000000930	AFF4	79	90.184	Canis_familiaris
ENSSARG00000011190	AFF4	50	50.581	ENSCAFG00020008224	AFF1	55	56.944	Canis_lupus_dingo
ENSSARG00000011190	AFF4	77	89.873	ENSCAFG00020000956	AFF4	80	90.184	Canis_lupus_dingo
ENSSARG00000011190	AFF4	77	89.873	ENSCHIG00000015153	AFF4	79	90.184	Capra_hircus
ENSSARG00000011190	AFF4	77	89.873	ENSTSYG00000014713	AFF4	80	90.184	Carlito_syrichta
ENSSARG00000011190	AFF4	74	86.709	ENSCAPG00000013980	AFF4	77	88.344	Cavia_aperea
ENSSARG00000011190	AFF4	77	86.709	ENSCPOG00000001814	AFF4	100	90.984	Cavia_porcellus
ENSSARG00000011190	AFF4	77	85.823	ENSCCAG00000030353	AFF4	96	85.714	Cebus_capucinus
ENSSARG00000011190	AFF4	77	86.709	ENSCATG00000044510	AFF4	80	87.117	Cercocebus_atys
ENSSARG00000011190	AFF4	77	85.443	ENSCLAG00000013850	AFF4	78	87.117	Chinchilla_lanigera
ENSSARG00000011190	AFF4	77	86.076	ENSCSAG00000013682	AFF4	78	86.503	Chlorocebus_sabaeus
ENSSARG00000011190	AFF4	77	85.443	ENSCHOG00000003138	AFF4	78	87.117	Choloepus_hoffmanni
ENSSARG00000011190	AFF4	54	54.348	ENSCPBG00000007277	AFF3	50	54.348	Chrysemys_picta_bellii
ENSSARG00000011190	AFF4	62	51.402	ENSCPBG00000020831	AFF2	52	53.585	Chrysemys_picta_bellii
ENSSARG00000011190	AFF4	74	39.487	ENSCPBG00000005382	AFF1	58	52.500	Chrysemys_picta_bellii
ENSSARG00000011190	AFF4	77	86.709	ENSCANG00000030350	AFF4	78	87.117	Colobus_angolensis_palliatus
ENSSARG00000011190	AFF4	78	85.890	ENSCGRG00001016680	Aff4	79	85.890	Cricetulus_griseus_chok1gshd
ENSSARG00000011190	AFF4	51	58.772	ENSCGRG00001015769	Aff1	50	57.600	Cricetulus_griseus_chok1gshd
ENSSARG00000011190	AFF4	55	55.435	ENSCGRG00000003408	Aff3	64	63.636	Cricetulus_griseus_crigri
ENSSARG00000011190	AFF4	78	84.663	ENSCGRG00000008529	Aff4	78	84.663	Cricetulus_griseus_crigri
ENSSARG00000011190	AFF4	70	73.684	ENSCSEG00000017002	aff4	78	63.452	Cynoglossus_semilaevis
ENSSARG00000011190	AFF4	77	61.323	ENSCVAG00000005218	aff4	78	61.069	Cyprinodon_variegatus
ENSSARG00000011190	AFF4	70	69.286	ENSDARG00000001857	aff4	73	69.286	Danio_rerio
ENSSARG00000011190	AFF4	77	88.608	ENSDNOG00000016669	AFF4	78	88.957	Dasypus_novemcinctus
ENSSARG00000011190	AFF4	54	61.644	ENSDORG00000013881	Aff1	51	61.644	Dipodomys_ordii
ENSSARG00000011190	AFF4	56	94.783	ENSETEG00000000128	AFF4	61	94.783	Echinops_telfairi
ENSSARG00000011190	AFF4	55	55.208	ENSETEG00000014905	AFF1	52	55.208	Echinops_telfairi
ENSSARG00000011190	AFF4	59	50.575	ENSEBUG00000012097	aff4	52	52.874	Eptatretus_burgeri
ENSSARG00000011190	AFF4	77	88.608	ENSEASG00005018361	AFF4	78	90.184	Equus_asinus_asinus
ENSSARG00000011190	AFF4	53	62.281	ENSEASG00005012760	AFF1	50	60.800	Equus_asinus_asinus
ENSSARG00000011190	AFF4	53	62.281	ENSECAG00000003619	AFF1	50	60.800	Equus_caballus
ENSSARG00000011190	AFF4	77	88.608	ENSECAG00000011969	AFF4	78	90.184	Equus_caballus
ENSSARG00000011190	AFF4	64	100.000	ENSEEUG00000011214	AFF4	65	100.000	Erinaceus_europaeus
ENSSARG00000011190	AFF4	69	73.285	ENSELUG00000023871	aff4	67	77.821	Esox_lucius
ENSSARG00000011190	AFF4	77	88.608	ENSFCAG00000012425	AFF4	78	90.184	Felis_catus
ENSSARG00000011190	AFF4	64	54.074	ENSFALG00000005554	AFF1	53	54.074	Ficedula_albicollis
ENSSARG00000011190	AFF4	78	80.233	ENSFALG00000008916	AFF4	73	87.135	Ficedula_albicollis
ENSSARG00000011190	AFF4	77	87.975	ENSFDAG00000005342	AFF4	78	89.571	Fukomys_damarensis
ENSSARG00000011190	AFF4	79	60.149	ENSFHEG00000004526	aff4	67	77.510	Fundulus_heteroclitus
ENSSARG00000011190	AFF4	68	62.972	ENSGMOG00000008803	aff4	69	61.364	Gadus_morhua
ENSSARG00000011190	AFF4	59	56.637	ENSGALG00000043935	AFF1	55	57.143	Gallus_gallus
ENSSARG00000011190	AFF4	78	79.651	ENSGALG00000030147	AFF4	77	80.368	Gallus_gallus
ENSSARG00000011190	AFF4	79	62.087	ENSGAFG00000005288	aff4	79	60.560	Gambusia_affinis
ENSSARG00000011190	AFF4	79	65.075	ENSGACG00000020734	aff4	73	75.000	Gasterosteus_aculeatus
ENSSARG00000011190	AFF4	78	79.651	ENSGAGG00000020214	AFF4	77	80.368	Gopherus_agassizii
ENSSARG00000011190	AFF4	77	86.076	ENSGGOG00000011786	AFF4	78	87.117	Gorilla_gorilla
ENSSARG00000011190	AFF4	75	69.341	ENSHBUG00000021987	aff4	77	63.472	Haplochromis_burtoni
ENSSARG00000011190	AFF4	77	86.076	ENSHGLG00000006661	AFF4	79	87.730	Heterocephalus_glaber_female
ENSSARG00000011190	AFF4	77	86.076	ENSHGLG00100018576	AFF4	79	87.730	Heterocephalus_glaber_male
ENSSARG00000011190	AFF4	70	75.000	ENSHCOG00000016280	aff4	68	77.043	Hippocampus_comes
ENSSARG00000011190	AFF4	76	63.706	ENSIPUG00000011689	aff4	72	66.116	Ictalurus_punctatus
ENSSARG00000011190	AFF4	59	50.000	ENSIPUG00000014592	aff2	50	52.809	Ictalurus_punctatus
ENSSARG00000011190	AFF4	52	44.404	ENSSTOG00000012140	AFF3	60	66.667	Ictidomys_tridecemlineatus
ENSSARG00000011190	AFF4	77	86.329	ENSSTOG00000026695	AFF4	100	96.721	Ictidomys_tridecemlineatus
ENSSARG00000011190	AFF4	63	51.445	ENSSTOG00000006530	AFF1	50	60.800	Ictidomys_tridecemlineatus
ENSSARG00000011190	AFF4	77	84.177	ENSJJAG00000000912	Aff4	79	84.663	Jaculus_jaculus
ENSSARG00000011190	AFF4	77	62.944	ENSKMAG00000010443	aff4	79	62.785	Kryptolebias_marmoratus
ENSSARG00000011190	AFF4	79	65.316	ENSLBEG00000017778	aff4	71	78.125	Labrus_bergylta
ENSSARG00000011190	AFF4	78	73.373	ENSLACG00000008849	AFF4	78	73.939	Latimeria_chalumnae
ENSSARG00000011190	AFF4	68	57.895	ENSLACG00000007303	AFF1	65	56.774	Latimeria_chalumnae
ENSSARG00000011190	AFF4	79	68.010	ENSLOCG00000010610	aff4	78	68.766	Lepisosteus_oculatus
ENSSARG00000011190	AFF4	54	52.632	ENSLOCG00000015403	aff2	50	53.184	Lepisosteus_oculatus
ENSSARG00000011190	AFF4	79	87.089	ENSLAFG00000010555	AFF4	78	87.730	Loxodonta_africana
ENSSARG00000011190	AFF4	77	86.709	ENSMFAG00000034615	AFF4	80	87.117	Macaca_fascicularis
ENSSARG00000011190	AFF4	77	86.709	ENSMMUG00000015640	AFF4	78	87.117	Macaca_mulatta
ENSSARG00000011190	AFF4	77	86.709	ENSMNEG00000033381	AFF4	80	87.117	Macaca_nemestrina
ENSSARG00000011190	AFF4	77	86.709	ENSMLEG00000028953	AFF4	80	87.117	Mandrillus_leucophaeus
ENSSARG00000011190	AFF4	79	65.570	ENSMAMG00000021453	aff4	78	64.141	Mastacembelus_armatus
ENSSARG00000011190	AFF4	75	69.341	ENSMZEG00005003218	aff4	77	63.566	Maylandia_zebra
ENSSARG00000011190	AFF4	59	55.752	ENSMGAG00000007646	AFF1	52	56.349	Meleagris_gallopavo
ENSSARG00000011190	AFF4	78	79.944	ENSMGAG00000009144	AFF4	78	80.508	Meleagris_gallopavo
ENSSARG00000011190	AFF4	66	85.311	ENSMAUG00000013669	Aff4	74	87.117	Mesocricetus_auratus
ENSSARG00000011190	AFF4	77	87.342	ENSMICG00000002753	-	81	87.730	Microcebus_murinus
ENSSARG00000011190	AFF4	78	86.503	ENSMOCG00000003884	Aff4	79	86.503	Microtus_ochrogaster
ENSSARG00000011190	AFF4	76	66.391	ENSMMOG00000013763	aff4	78	65.014	Mola_mola
ENSSARG00000011190	AFF4	77	82.911	ENSMODG00000013842	AFF4	78	83.436	Monodelphis_domestica
ENSSARG00000011190	AFF4	79	64.721	ENSMALG00000017690	aff4	80	63.291	Monopterus_albus
ENSSARG00000011190	AFF4	79	85.465	MGP_CAROLIEiJ_G0016331	Aff4	100	93.443	Mus_caroli
ENSSARG00000011190	AFF4	79	85.465	ENSMUSG00000049470	Aff4	100	94.262	Mus_musculus
ENSSARG00000011190	AFF4	64	36.188	ENSMUSG00000037138	Aff3	54	63.636	Mus_musculus
ENSSARG00000011190	AFF4	79	84.302	MGP_PahariEiJ_G0017466	Aff4	100	94.262	Mus_pahari
ENSSARG00000011190	AFF4	79	85.465	MGP_SPRETEiJ_G0017175	Aff4	100	94.262	Mus_spretus
ENSSARG00000011190	AFF4	57	61.600	ENSMPUG00000002270	AFF1	53	61.600	Mustela_putorius_furo
ENSSARG00000011190	AFF4	77	89.241	ENSMPUG00000010316	AFF4	78	89.571	Mustela_putorius_furo
ENSSARG00000011190	AFF4	55	62.963	ENSMLUG00000000293	AFF1	53	54.930	Myotis_lucifugus
ENSSARG00000011190	AFF4	77	87.975	ENSMLUG00000015081	AFF4	78	88.344	Myotis_lucifugus
ENSSARG00000011190	AFF4	56	58.696	ENSNGAG00000002408	Aff3	54	66.667	Nannospalax_galili
ENSSARG00000011190	AFF4	78	86.228	ENSNGAG00000019867	Aff4	79	86.503	Nannospalax_galili
ENSSARG00000011190	AFF4	77	85.570	ENSNLEG00000012874	AFF4	80	87.117	Nomascus_leucogenys
ENSSARG00000011190	AFF4	67	100.000	ENSMEUG00000006620	-	67	100.000	Notamacropus_eugenii
ENSSARG00000011190	AFF4	57	100.000	ENSOPRG00000014519	AFF4	55	100.000	Ochotona_princeps
ENSSARG00000011190	AFF4	77	86.076	ENSODEG00000008137	AFF4	79	87.730	Octodon_degus
ENSSARG00000011190	AFF4	79	63.706	ENSONIG00000008446	aff4	77	62.944	Oreochromis_niloticus
ENSSARG00000011190	AFF4	75	82.278	ENSOANG00000007428	AFF4	71	82.822	Ornithorhynchus_anatinus
ENSSARG00000011190	AFF4	77	87.975	ENSOCUG00000013635	AFF4	78	88.344	Oryctolagus_cuniculus
ENSSARG00000011190	AFF4	70	72.368	ENSORLG00000001361	aff4	78	63.520	Oryzias_latipes
ENSSARG00000011190	AFF4	70	71.711	ENSORLG00020020601	aff4	78	63.776	Oryzias_latipes_hni
ENSSARG00000011190	AFF4	70	72.368	ENSORLG00015004684	aff4	78	63.520	Oryzias_latipes_hsok
ENSSARG00000011190	AFF4	71	71.053	ENSOMEG00000005078	aff4	78	63.776	Oryzias_melastigma
ENSSARG00000011190	AFF4	77	87.975	ENSOGAG00000028482	AFF4	78	88.344	Otolemur_garnettii
ENSSARG00000011190	AFF4	77	89.873	ENSOARG00000013406	AFF4	78	90.184	Ovis_aries
ENSSARG00000011190	AFF4	77	86.329	ENSPPAG00000043255	AFF4	78	87.117	Pan_paniscus
ENSSARG00000011190	AFF4	77	88.608	ENSPPRG00000016213	AFF4	78	90.184	Panthera_pardus
ENSSARG00000011190	AFF4	77	88.608	ENSPTIG00000016209	AFF4	78	90.184	Panthera_tigris_altaica
ENSSARG00000011190	AFF4	77	86.329	ENSPTRG00000017228	AFF4	78	87.117	Pan_troglodytes
ENSSARG00000011190	AFF4	77	86.329	ENSPTRG00000046486	-	78	87.117	Pan_troglodytes
ENSSARG00000011190	AFF4	77	86.709	ENSPANG00000007039	AFF4	80	87.117	Papio_anubis
ENSSARG00000011190	AFF4	62	51.613	ENSPKIG00000001556	aff2	50	50.379	Paramormyrops_kingsleyae
ENSSARG00000011190	AFF4	78	63.171	ENSPKIG00000024325	AFF4	77	61.637	Paramormyrops_kingsleyae
ENSSARG00000011190	AFF4	79	64.796	ENSPKIG00000024249	AFF4	77	63.776	Paramormyrops_kingsleyae
ENSSARG00000011190	AFF4	79	79.661	ENSPSIG00000013003	AFF4	77	80.226	Pelodiscus_sinensis
ENSSARG00000011190	AFF4	52	44.765	ENSPEMG00000014802	Aff3	64	63.636	Peromyscus_maniculatus_bairdii
ENSSARG00000011190	AFF4	78	85.890	ENSPEMG00000007995	Aff4	78	85.890	Peromyscus_maniculatus_bairdii
ENSSARG00000011190	AFF4	79	83.140	ENSPCIG00000000197	AFF4	78	83.436	Phascolarctos_cinereus
ENSSARG00000011190	AFF4	77	62.437	ENSPFOG00000007079	aff4	78	61.069	Poecilia_formosa
ENSSARG00000011190	AFF4	77	62.437	ENSPLAG00000001837	aff4	78	61.069	Poecilia_latipinna
ENSSARG00000011190	AFF4	77	62.437	ENSPMEG00000005613	aff4	78	61.069	Poecilia_mexicana
ENSSARG00000011190	AFF4	77	62.183	ENSPREG00000005287	aff4	78	60.560	Poecilia_reticulata
ENSSARG00000011190	AFF4	77	86.076	ENSPPYG00000015775	AFF4	78	87.117	Pongo_abelii
ENSSARG00000011190	AFF4	73	97.727	ENSPCAG00000003995	AFF4	72	97.727	Procavia_capensis
ENSSARG00000011190	AFF4	77	89.241	ENSPCOG00000023876	AFF4	78	89.571	Propithecus_coquereli
ENSSARG00000011190	AFF4	77	87.975	ENSPVAG00000015204	AFF4	78	89.571	Pteropus_vampyrus
ENSSARG00000011190	AFF4	75	69.341	ENSPNYG00000014804	aff4	77	63.566	Pundamilia_nyererei
ENSSARG00000011190	AFF4	79	63.797	ENSPNAG00000004777	aff4	78	64.810	Pygocentrus_nattereri
ENSSARG00000011190	AFF4	77	84.810	ENSRNOG00000006965	Aff4	78	85.276	Rattus_norvegicus
ENSSARG00000011190	AFF4	77	86.709	ENSRBIG00000029376	AFF4	79	87.117	Rhinopithecus_bieti
ENSSARG00000011190	AFF4	77	86.709	ENSRROG00000033812	AFF4	79	87.117	Rhinopithecus_roxellana
ENSSARG00000011190	AFF4	77	85.443	ENSSBOG00000021562	AFF4	96	85.143	Saimiri_boliviensis_boliviensis
ENSSARG00000011190	AFF4	79	83.721	ENSSHAG00000013198	AFF4	78	84.049	Sarcophilus_harrisii
ENSSARG00000011190	AFF4	57	52.899	ENSSFOG00015021743	-	56	52.899	Scleropages_formosus
ENSSARG00000011190	AFF4	58	53.684	ENSSFOG00015004020	aff2	52	53.358	Scleropages_formosus
ENSSARG00000011190	AFF4	53	54.255	ENSSFOG00015009105	-	56	54.255	Scleropages_formosus
ENSSARG00000011190	AFF4	79	66.751	ENSSFOG00015018646	aff4	77	67.513	Scleropages_formosus
ENSSARG00000011190	AFF4	68	82.667	ENSSMAG00000004734	aff4	69	82.667	Scophthalmus_maximus
ENSSARG00000011190	AFF4	79	65.823	ENSSDUG00000019498	aff4	78	64.141	Seriola_dumerili
ENSSARG00000011190	AFF4	79	65.823	ENSSLDG00000007683	aff4	80	64.141	Seriola_lalandi_dorsalis
ENSSARG00000011190	AFF4	61	53.247	ENSSPUG00000001574	AFF1	55	56.618	Sphenodon_punctatus
ENSSARG00000011190	AFF4	78	79.944	ENSSPUG00000012215	AFF4	79	80.982	Sphenodon_punctatus
ENSSARG00000011190	AFF4	77	87.975	ENSSSCG00000014291	AFF4	78	88.344	Sus_scrofa
ENSSARG00000011190	AFF4	78	80.233	ENSTGUG00000000187	AFF4	78	80.982	Taeniopygia_guttata
ENSSARG00000011190	AFF4	64	55.294	ENSTGUG00000002726	AFF1	53	55.294	Taeniopygia_guttata
ENSSARG00000011190	AFF4	79	65.823	ENSTRUG00000008087	aff4	77	64.394	Takifugu_rubripes
ENSSARG00000011190	AFF4	53	41.852	ENSTNIG00000007537	-	52	41.699	Tetraodon_nigroviridis
ENSSARG00000011190	AFF4	76	68.889	ENSTNIG00000018201	aff4	77	63.889	Tetraodon_nigroviridis
ENSSARG00000011190	AFF4	56	38.619	ENSTBEG00000007536	AFF1	58	49.057	Tupaia_belangeri
ENSSARG00000011190	AFF4	64	84.557	ENSTBEG00000012172	AFF4	66	89.655	Tupaia_belangeri
ENSSARG00000011190	AFF4	77	89.873	ENSTTRG00000014729	AFF4	78	90.184	Tursiops_truncatus
ENSSARG00000011190	AFF4	77	88.608	ENSUAMG00000025984	AFF4	78	90.184	Ursus_americanus
ENSSARG00000011190	AFF4	77	88.608	ENSUMAG00000017952	AFF4	83	90.184	Ursus_maritimus
ENSSARG00000011190	AFF4	77	85.443	ENSVPAG00000007247	AFF4	78	87.117	Vicugna_pacos
ENSSARG00000011190	AFF4	77	89.873	ENSVVUG00000024524	AFF4	79	90.184	Vulpes_vulpes
ENSSARG00000011190	AFF4	56	39.241	ENSVVUG00000009263	AFF1	50	61.600	Vulpes_vulpes
ENSSARG00000011190	AFF4	60	52.091	ENSXETG00000019630	aff2	51	52.652	Xenopus_tropicalis
ENSSARG00000011190	AFF4	70	75.000	ENSXETG00000004169	aff4	69	75.254	Xenopus_tropicalis
ENSSARG00000011190	AFF4	70	76.623	ENSXMAG00000001642	aff4	72	73.026	Xiphophorus_maculatus