EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000011730 (Gene tree)
Gene ID: -
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 26539 bases
Position: chrGeneScaffold_4810:112361-138899
Accession: 4004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000010616	KH_1	PF00013.29	5.9e-54	1	3
ENSSARP00000010616	KH_1	PF00013.29	5.9e-54	2	3
ENSSARP00000010616	KH_1	PF00013.29	5.9e-54	3	3
ENSSARP00000010616	KH_2	PF07650.17	5.2e-18	1	2
ENSSARP00000010616	KH_2	PF07650.17	5.2e-18	2	2
ENSSARP00000010616	DUF1897	PF09005.10	5.6e-12	1	2
ENSSARP00000010616	DUF1897	PF09005.10	5.6e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000011752	FUBP1-201	1968	-	ENSSARP00000010616	655 (aa)	-	UPI00015828BC

Gene Model

Click here to download ENSSARG00000011730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000011730's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000011730	FUBP1	57	100.000	ENSG00000162613	FUBP1	100	97.491	Homo_sapiens
ENSSARG00000011730	FUBP1	55	88.372	ENSAPOG00000014845	fubp1	70	87.356	Acanthochromis_polyacanthus
ENSSARG00000011730	FUBP1	57	100.000	ENSAMEG00000007372	FUBP1	99	90.066	Ailuropoda_melanoleuca
ENSSARG00000011730	FUBP1	56	88.372	ENSACIG00000020024	fubp1	69	87.356	Amphilophus_citrinellus
ENSSARG00000011730	FUBP1	59	76.316	ENSAPEG00000012232	fubp1	72	87.356	Amphiprion_percula
ENSSARG00000011730	FUBP1	56	88.372	ENSATEG00000018619	fubp1	70	87.356	Anabas_testudineus
ENSSARG00000011730	FUBP1	50	98.851	ENSAPLG00000005965	FUBP1	69	98.851	Anas_platyrhynchos
ENSSARG00000011730	FUBP1	56	100.000	ENSACAG00000006310	FUBP1	79	83.389	Anolis_carolinensis
ENSSARG00000011730	FUBP1	56	88.372	ENSACLG00000006708	fubp1	72	87.356	Astatotilapia_calliptera
ENSSARG00000011730	FUBP1	57	100.000	ENSCJAG00000007062	FUBP1	100	97.491	Callithrix_jacchus
ENSSARG00000011730	FUBP1	57	100.000	ENSCAFG00000020361	FUBP1	99	97.491	Canis_familiaris
ENSSARG00000011730	FUBP1	51	98.969	ENSTSYG00000000148	FUBP1	99	97.071	Carlito_syrichta
ENSSARG00000011730	FUBP1	57	100.000	ENSCPOG00000002757	FUBP1	100	97.133	Cavia_porcellus
ENSSARG00000011730	FUBP1	86	97.491	ENSCCAG00000036537	FUBP1	100	97.491	Cebus_capucinus
ENSSARG00000011730	FUBP1	57	100.000	ENSCATG00000042126	FUBP1	100	97.491	Cercocebus_atys
ENSSARG00000011730	FUBP1	57	100.000	ENSCLAG00000005621	FUBP1	100	97.133	Chinchilla_lanigera
ENSSARG00000011730	FUBP1	57	100.000	ENSCSAG00000001402	FUBP1	99	97.491	Chlorocebus_sabaeus
ENSSARG00000011730	FUBP1	57	98.969	ENSCHOG00000008177	FUBP1	100	97.491	Choloepus_hoffmanni
ENSSARG00000011730	FUBP1	57	100.000	ENSCGRG00001007103	Fubp1	100	94.982	Cricetulus_griseus_chok1gshd
ENSSARG00000011730	FUBP1	51	100.000	ENSCGRG00000003372	Fubp1	100	96.234	Cricetulus_griseus_crigri
ENSSARG00000011730	FUBP1	56	88.372	ENSCSEG00000021412	fubp1	70	87.356	Cynoglossus_semilaevis
ENSSARG00000011730	FUBP1	56	88.372	ENSCVAG00000014487	fubp1	69	88.506	Cyprinodon_variegatus
ENSSARG00000011730	FUBP1	55	87.209	ENSDARG00000029248	fubp1	83	81.308	Danio_rerio
ENSSARG00000011730	FUBP1	54	72.277	ENSDNOG00000034565	-	80	79.310	Dasypus_novemcinctus
ENSSARG00000011730	FUBP1	74	96.899	ENSDORG00000016534	Fubp1	100	97.133	Dipodomys_ordii
ENSSARG00000011730	FUBP1	63	94.982	ENSETEG00000000948	-	61	94.982	Echinops_telfairi
ENSSARG00000011730	FUBP1	53	70.000	ENSEBUG00000016143	fubp1	64	63.934	Eptatretus_burgeri
ENSSARG00000011730	FUBP1	57	100.000	ENSEEUG00000001287	FUBP1	100	80.208	Erinaceus_europaeus
ENSSARG00000011730	FUBP1	55	86.207	ENSELUG00000007990	fubp1	70	86.207	Esox_lucius
ENSSARG00000011730	FUBP1	56	98.851	ENSFALG00000005768	FUBP1	69	98.851	Ficedula_albicollis
ENSSARG00000011730	FUBP1	58	98.980	ENSFDAG00000014210	FUBP1	100	97.133	Fukomys_damarensis
ENSSARG00000011730	FUBP1	59	89.474	ENSFHEG00000005230	fubp1	79	89.333	Fundulus_heteroclitus
ENSSARG00000011730	FUBP1	69	69.004	ENSGMOG00000003370	fubp1	77	68.613	Gadus_morhua
ENSSARG00000011730	FUBP1	72	96.522	ENSGALG00000008939	FUBP1	87	95.726	Gallus_gallus
ENSSARG00000011730	FUBP1	70	89.189	ENSGAFG00000020972	fubp1	82	87.838	Gambusia_affinis
ENSSARG00000011730	FUBP1	55	86.364	ENSGACG00000016563	fubp1	70	85.393	Gasterosteus_aculeatus
ENSSARG00000011730	FUBP1	56	88.372	ENSHBUG00000009835	fubp1	85	87.356	Haplochromis_burtoni
ENSSARG00000011730	FUBP1	57	100.000	ENSHGLG00000008415	-	100	97.133	Heterocephalus_glaber_female
ENSSARG00000011730	FUBP1	60	93.162	ENSHGLG00000002808	-	89	93.162	Heterocephalus_glaber_female
ENSSARG00000011730	FUBP1	60	93.162	ENSHGLG00100001414	-	89	93.162	Heterocephalus_glaber_male
ENSSARG00000011730	FUBP1	57	100.000	ENSHGLG00100003417	-	100	97.133	Heterocephalus_glaber_male
ENSSARG00000011730	FUBP1	56	87.209	ENSHCOG00000000910	fubp1	84	86.957	Hippocampus_comes
ENSSARG00000011730	FUBP1	70	89.130	ENSIPUG00000009896	fubp1	83	88.298	Ictalurus_punctatus
ENSSARG00000011730	FUBP1	57	100.000	ENSSTOG00000014312	FUBP1	100	97.491	Ictidomys_tridecemlineatus
ENSSARG00000011730	FUBP1	57	100.000	ENSJJAG00000020069	Fubp1	99	96.774	Jaculus_jaculus
ENSSARG00000011730	FUBP1	56	88.372	ENSKMAG00000018897	fubp1	69	87.356	Kryptolebias_marmoratus
ENSSARG00000011730	FUBP1	53	88.372	ENSLBEG00000012700	fubp1	72	87.356	Labrus_bergylta
ENSSARG00000011730	FUBP1	67	90.426	ENSLOCG00000003745	fubp1	84	90.426	Lepisosteus_oculatus
ENSSARG00000011730	FUBP1	57	100.000	ENSLAFG00000003273	FUBP1	99	94.565	Loxodonta_africana
ENSSARG00000011730	FUBP1	57	100.000	ENSMFAG00000031825	FUBP1	100	97.491	Macaca_fascicularis
ENSSARG00000011730	FUBP1	57	100.000	ENSMMUG00000002899	FUBP1	100	97.491	Macaca_mulatta
ENSSARG00000011730	FUBP1	88	92.203	ENSMNEG00000045212	FUBP1	100	97.491	Macaca_nemestrina
ENSSARG00000011730	FUBP1	56	89.535	ENSMAMG00000007489	fubp1	81	69.728	Mastacembelus_armatus
ENSSARG00000011730	FUBP1	56	88.372	ENSMZEG00005024298	fubp1	70	87.356	Maylandia_zebra
ENSSARG00000011730	FUBP1	66	96.522	ENSMGAG00000009424	FUBP1	86	95.726	Meleagris_gallopavo
ENSSARG00000011730	FUBP1	57	100.000	ENSMAUG00000016428	Fubp1	100	96.774	Mesocricetus_auratus
ENSSARG00000011730	FUBP1	57	100.000	ENSMOCG00000014751	Fubp1	100	95.699	Microtus_ochrogaster
ENSSARG00000011730	FUBP1	52	98.182	ENSMODG00000020804	FUBP1	84	98.182	Monodelphis_domestica
ENSSARG00000011730	FUBP1	56	88.372	ENSMALG00000015173	fubp1	70	87.356	Monopterus_albus
ENSSARG00000011730	FUBP1	57	100.000	MGP_CAROLIEiJ_G0025740	Fubp1	100	94.982	Mus_caroli
ENSSARG00000011730	FUBP1	57	98.969	ENSMUSG00000028034	Fubp1	100	94.982	Mus_musculus
ENSSARG00000011730	FUBP1	57	100.000	MGP_PahariEiJ_G0027191	Fubp1	100	95.341	Mus_pahari
ENSSARG00000011730	FUBP1	57	100.000	MGP_SPRETEiJ_G0026693	Fubp1	100	94.982	Mus_spretus
ENSSARG00000011730	FUBP1	56	100.000	ENSMLUG00000014802	FUBP1	71	100.000	Myotis_lucifugus
ENSSARG00000011730	FUBP1	57	100.000	ENSNGAG00000014302	Fubp1	100	88.316	Nannospalax_galili
ENSSARG00000011730	FUBP1	69	71.326	ENSNBRG00000015099	fubp1	72	87.356	Neolamprologus_brichardi
ENSSARG00000011730	FUBP1	57	100.000	ENSNLEG00000009772	FUBP1	100	89.236	Nomascus_leucogenys
ENSSARG00000011730	FUBP1	53	100.000	ENSMEUG00000007917	-	60	100.000	Notamacropus_eugenii
ENSSARG00000011730	FUBP1	57	100.000	ENSODEG00000002600	-	100	97.133	Octodon_degus
ENSSARG00000011730	FUBP1	88	67.025	ENSODEG00000003657	-	60	67.025	Octodon_degus
ENSSARG00000011730	FUBP1	56	88.372	ENSONIG00000018381	fubp1	69	87.356	Oreochromis_niloticus
ENSSARG00000011730	FUBP1	74	94.258	ENSOANG00000009777	FUBP1	99	94.258	Ornithorhynchus_anatinus
ENSSARG00000011730	FUBP1	60	74.286	ENSORLG00000003540	fubp1	71	86.207	Oryzias_latipes
ENSSARG00000011730	FUBP1	85	72.401	ENSORLG00020005908	fubp1	70	86.207	Oryzias_latipes_hni
ENSSARG00000011730	FUBP1	85	72.401	ENSORLG00015008779	fubp1	70	86.207	Oryzias_latipes_hsok
ENSSARG00000011730	FUBP1	56	87.209	ENSOMEG00000021943	fubp1	70	86.207	Oryzias_melastigma
ENSSARG00000011730	FUBP1	57	100.000	ENSOGAG00000014233	FUBP1	99	89.474	Otolemur_garnettii
ENSSARG00000011730	FUBP1	88	97.133	ENSOARG00000013259	FUBP1	99	97.133	Ovis_aries
ENSSARG00000011730	FUBP1	57	100.000	ENSPPRG00000000413	FUBP1	100	97.491	Panthera_pardus
ENSSARG00000011730	FUBP1	57	100.000	ENSPTIG00000019450	FUBP1	100	97.491	Panthera_tigris_altaica
ENSSARG00000011730	FUBP1	51	100.000	ENSPSIG00000012965	FUBP1	69	100.000	Pelodiscus_sinensis
ENSSARG00000011730	FUBP1	69	89.412	ENSPMGG00000009060	fubp1	84	89.130	Periophthalmus_magnuspinnatus
ENSSARG00000011730	FUBP1	57	100.000	ENSPEMG00000021802	Fubp1	100	94.982	Peromyscus_maniculatus_bairdii
ENSSARG00000011730	FUBP1	56	88.372	ENSPFOG00000000238	fubp1	76	72.085	Poecilia_formosa
ENSSARG00000011730	FUBP1	56	87.209	ENSPLAG00000021170	fubp1	72	87.356	Poecilia_latipinna
ENSSARG00000011730	FUBP1	56	88.372	ENSPMEG00000004747	fubp1	73	87.356	Poecilia_mexicana
ENSSARG00000011730	FUBP1	56	88.372	ENSPREG00000017911	fubp1	70	87.356	Poecilia_reticulata
ENSSARG00000011730	FUBP1	60	100.000	ENSPPYG00000001219	-	70	100.000	Pongo_abelii
ENSSARG00000011730	FUBP1	57	100.000	ENSPCAG00000012617	FUBP1	100	96.774	Procavia_capensis
ENSSARG00000011730	FUBP1	57	100.000	ENSPCOG00000024974	FUBP1	100	97.491	Propithecus_coquereli
ENSSARG00000011730	FUBP1	74	97.674	ENSPVAG00000014637	FUBP1	80	97.674	Pteropus_vampyrus
ENSSARG00000011730	FUBP1	56	88.372	ENSPNYG00000004552	fubp1	73	87.356	Pundamilia_nyererei
ENSSARG00000011730	FUBP1	56	90.698	ENSPNAG00000016207	fubp1	87	86.207	Pygocentrus_nattereri
ENSSARG00000011730	FUBP1	57	100.000	ENSRNOG00000043370	Fubp1	99	94.982	Rattus_norvegicus
ENSSARG00000011730	FUBP1	57	100.000	ENSRBIG00000042950	FUBP1	99	97.491	Rhinopithecus_bieti
ENSSARG00000011730	FUBP1	57	100.000	ENSRROG00000043534	FUBP1	99	97.491	Rhinopithecus_roxellana
ENSSARG00000011730	FUBP1	57	100.000	ENSSBOG00000027299	FUBP1	100	97.491	Saimiri_boliviensis_boliviensis
ENSSARG00000011730	FUBP1	52	97.959	ENSSHAG00000005367	FUBP1	99	95.745	Sarcophilus_harrisii
ENSSARG00000011730	FUBP1	67	88.043	ENSSFOG00015010213	fubp1	82	87.234	Scleropages_formosus
ENSSARG00000011730	FUBP1	55	88.372	ENSSMAG00000012029	fubp1	80	72.202	Scophthalmus_maximus
ENSSARG00000011730	FUBP1	56	88.372	ENSSDUG00000007383	fubp1	68	87.356	Seriola_dumerili
ENSSARG00000011730	FUBP1	56	88.372	ENSSLDG00000022863	fubp1	72	87.356	Seriola_lalandi_dorsalis
ENSSARG00000011730	FUBP1	85	92.115	ENSSPUG00000008389	FUBP1	84	94.828	Sphenodon_punctatus
ENSSARG00000011730	FUBP1	56	88.372	ENSSPAG00000010161	fubp1	69	87.356	Stegastes_partitus
ENSSARG00000011730	FUBP1	66	96.491	ENSTGUG00000006841	FUBP1	86	95.690	Taeniopygia_guttata
ENSSARG00000011730	FUBP1	67	86.047	ENSTRUG00000004615	fubp1	84	85.057	Takifugu_rubripes
ENSSARG00000011730	FUBP1	67	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSSARG00000011730	FUBP1	57	100.000	ENSTTRG00000000096	FUBP1	100	97.491	Tursiops_truncatus
ENSSARG00000011730	FUBP1	57	100.000	ENSVPAG00000004709	FUBP1	71	100.000	Vicugna_pacos
ENSSARG00000011730	FUBP1	69	70.567	ENSXCOG00000019354	fubp1	83	70.513	Xiphophorus_couchianus
ENSSARG00000011730	FUBP1	56	88.372	ENSXMAG00000007168	fubp1	73	87.356	Xiphophorus_maculatus