EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000011972 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 393 bases
Position: chrscaffold_91949:377-769
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000010805	APOBEC_N	PF08210.11	1e-23	1	1
ENSSARP00000010805	APOBEC_C	PF05240.14	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000011965	-	393	-	ENSSARP00000010805	131 (aa)	-	UPI000157F867

Gene Model

Click here to download ENSSARG00000011972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000011972's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000011972	-	100	93.893	ENSSARG00000000032	-	77	93.893

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000011972	-	99	71.756	ENSG00000111701	APOBEC1	56	71.756	Homo_sapiens
ENSSARG00000011972	-	100	72.727	ENSAMEG00000007098	APOBEC1	56	72.727	Ailuropoda_melanoleuca
ENSSARG00000011972	-	97	40.945	ENSACAG00000028578	-	71	40.945	Anolis_carolinensis
ENSSARG00000011972	-	99	68.702	ENSANAG00000027743	APOBEC1	53	68.702	Aotus_nancymaae
ENSSARG00000011972	-	100	66.667	ENSBTAG00000014683	APOBEC1	56	66.667	Bos_taurus
ENSSARG00000011972	-	98	70.543	ENSCJAG00000005398	APOBEC1	58	70.543	Callithrix_jacchus
ENSSARG00000011972	-	100	71.970	ENSCAFG00000013901	APOBEC1	56	71.970	Canis_familiaris
ENSSARG00000011972	-	100	71.970	ENSCAFG00020003511	APOBEC1	55	71.970	Canis_lupus_dingo
ENSSARG00000011972	-	100	66.667	ENSCHIG00000011898	APOBEC1	55	66.667	Capra_hircus
ENSSARG00000011972	-	98	74.615	ENSTSYG00000029141	APOBEC1	92	74.615	Carlito_syrichta
ENSSARG00000011972	-	98	66.667	ENSCAPG00000015882	-	60	66.667	Cavia_aperea
ENSSARG00000011972	-	98	66.667	ENSCPOG00000033068	APOBEC1	55	66.667	Cavia_porcellus
ENSSARG00000011972	-	99	68.702	ENSCCAG00000022258	APOBEC1	56	68.702	Cebus_capucinus
ENSSARG00000011972	-	99	72.519	ENSCATG00000021613	APOBEC1	53	72.519	Cercocebus_atys
ENSSARG00000011972	-	98	67.442	ENSCLAG00000014645	APOBEC1	56	67.442	Chinchilla_lanigera
ENSSARG00000011972	-	73	72.917	ENSCSAG00000009817	APOBEC1	50	72.917	Chlorocebus_sabaeus
ENSSARG00000011972	-	96	48.837	ENSCPBG00000017398	-	57	48.837	Chrysemys_picta_bellii
ENSSARG00000011972	-	99	51.515	ENSCPBG00000014331	-	54	54.098	Chrysemys_picta_bellii
ENSSARG00000011972	-	99	50.758	ENSCPBG00000014335	-	53	50.758	Chrysemys_picta_bellii
ENSSARG00000011972	-	95	48.413	ENSCPBG00000014327	-	50	42.636	Chrysemys_picta_bellii
ENSSARG00000011972	-	95	50.794	ENSCPBG00000014328	-	55	50.794	Chrysemys_picta_bellii
ENSSARG00000011972	-	99	72.519	ENSCANG00000038359	APOBEC1	57	72.519	Colobus_angolensis_palliatus
ENSSARG00000011972	-	98	67.442	ENSCGRG00001011130	Apobec1	56	67.442	Cricetulus_griseus_chok1gshd
ENSSARG00000011972	-	98	67.442	ENSCGRG00000008644	Apobec1	56	67.442	Cricetulus_griseus_crigri
ENSSARG00000011972	-	99	74.046	ENSDNOG00000010926	APOBEC1	56	74.046	Dasypus_novemcinctus
ENSSARG00000011972	-	98	64.615	ENSDORG00000023717	Apobec1	61	64.615	Dipodomys_ordii
ENSSARG00000011972	-	100	64.662	ENSETEG00000004867	APOBEC1	56	64.662	Echinops_telfairi
ENSSARG00000011972	-	99	70.992	ENSEASG00005015951	APOBEC1	55	70.992	Equus_asinus_asinus
ENSSARG00000011972	-	73	70.833	ENSECAG00000017163	APOBEC1	50	70.833	Equus_caballus
ENSSARG00000011972	-	98	70.543	ENSEEUG00000007530	-	61	70.543	Erinaceus_europaeus
ENSSARG00000011972	-	98	71.318	ENSEEUG00000009112	-	57	71.318	Erinaceus_europaeus
ENSSARG00000011972	-	100	72.727	ENSFCAG00000009350	APOBEC1	56	72.727	Felis_catus
ENSSARG00000011972	-	97	47.656	ENSFALG00000007257	-	63	47.656	Ficedula_albicollis
ENSSARG00000011972	-	90	56.303	ENSFDAG00000018470	APOBEC1	57	56.303	Fukomys_damarensis
ENSSARG00000011972	-	97	57.692	ENSGAGG00000011837	-	69	57.692	Gopherus_agassizii
ENSSARG00000011972	-	99	44.697	ENSGAGG00000021744	-	52	44.697	Gopherus_agassizii
ENSSARG00000011972	-	98	50.769	ENSGAGG00000004947	-	83	50.388	Gopherus_agassizii
ENSSARG00000011972	-	100	62.121	ENSHGLG00000001495	APOBEC1	56	62.121	Heterocephalus_glaber_female
ENSSARG00000011972	-	100	61.364	ENSHGLG00100002187	APOBEC1	56	61.364	Heterocephalus_glaber_male
ENSSARG00000011972	-	98	71.318	ENSSTOG00000021971	APOBEC1	100	68.367	Ictidomys_tridecemlineatus
ENSSARG00000011972	-	100	65.909	ENSJJAG00000022108	Apobec1	58	65.909	Jaculus_jaculus
ENSSARG00000011972	-	99	67.939	ENSLAFG00000030837	APOBEC1	59	67.939	Loxodonta_africana
ENSSARG00000011972	-	99	72.519	ENSMFAG00000000277	APOBEC1	56	72.519	Macaca_fascicularis
ENSSARG00000011972	-	99	72.519	ENSMNEG00000029670	APOBEC1	56	72.519	Macaca_nemestrina
ENSSARG00000011972	-	99	72.519	ENSMLEG00000036301	APOBEC1	56	72.519	Mandrillus_leucophaeus
ENSSARG00000011972	-	98	65.116	ENSMAUG00000022167	Apobec1	58	65.116	Mesocricetus_auratus
ENSSARG00000011972	-	99	71.756	ENSMICG00000043645	APOBEC1	57	71.756	Microcebus_murinus
ENSSARG00000011972	-	73	70.103	ENSMOCG00000016170	-	86	70.103	Microtus_ochrogaster
ENSSARG00000011972	-	98	65.625	ENSMODG00000018004	APOBEC1	54	65.625	Monodelphis_domestica
ENSSARG00000011972	-	98	69.767	ENSMUSG00000040613	Apobec1	87	69.524	Mus_musculus
ENSSARG00000011972	-	98	68.992	MGP_PahariEiJ_G0022580	-	87	68.571	Mus_pahari
ENSSARG00000011972	-	98	69.767	MGP_SPRETEiJ_G0029857	Apobec1	87	69.524	Mus_spretus
ENSSARG00000011972	-	100	71.212	ENSMPUG00000017532	APOBEC1	56	71.212	Mustela_putorius_furo
ENSSARG00000011972	-	100	64.394	ENSNGAG00000022607	Apobec1	58	64.394	Nannospalax_galili
ENSSARG00000011972	-	99	70.229	ENSNLEG00000005342	APOBEC1	56	70.229	Nomascus_leucogenys
ENSSARG00000011972	-	100	62.879	ENSMEUG00000013406	APOBEC1	56	62.879	Notamacropus_eugenii
ENSSARG00000011972	-	98	60.156	ENSOPRG00000009508	-	72	60.156	Ochotona_princeps
ENSSARG00000011972	-	74	63.265	ENSODEG00000001157	-	100	63.265	Octodon_degus
ENSSARG00000011972	-	99	74.046	ENSOGAG00000026415	APOBEC1	56	74.046	Otolemur_garnettii
ENSSARG00000011972	-	100	66.667	ENSOARG00000002072	APOBEC1	55	66.667	Ovis_aries
ENSSARG00000011972	-	99	68.462	ENSPPAG00000027657	APOBEC1	52	68.462	Pan_paniscus
ENSSARG00000011972	-	100	73.485	ENSPPRG00000012182	APOBEC1	56	73.485	Panthera_pardus
ENSSARG00000011972	-	100	73.485	ENSPTIG00000020280	APOBEC1	56	73.485	Panthera_tigris_altaica
ENSSARG00000011972	-	99	73.282	ENSPTRG00000004614	APOBEC1	56	73.282	Pan_troglodytes
ENSSARG00000011972	-	99	71.756	ENSPANG00000021027	APOBEC1	56	71.756	Papio_anubis
ENSSARG00000011972	-	99	48.485	ENSPSIG00000012568	-	57	48.485	Pelodiscus_sinensis
ENSSARG00000011972	-	66	55.172	ENSPSIG00000012791	-	52	55.172	Pelodiscus_sinensis
ENSSARG00000011972	-	98	68.992	ENSPEMG00000023841	Apobec1	56	68.992	Peromyscus_maniculatus_bairdii
ENSSARG00000011972	-	98	65.116	ENSPCIG00000023973	APOBEC1	55	65.116	Phascolarctos_cinereus
ENSSARG00000011972	-	99	69.466	ENSPPYG00000004228	APOBEC1	53	69.466	Pongo_abelii
ENSSARG00000011972	-	98	68.462	ENSPCAG00000008733	APOBEC1	70	68.462	Procavia_capensis
ENSSARG00000011972	-	98	71.318	ENSPCOG00000013957	APOBEC1	57	71.318	Propithecus_coquereli
ENSSARG00000011972	-	99	72.519	ENSPVAG00000010709	APOBEC1	56	72.519	Pteropus_vampyrus
ENSSARG00000011972	-	98	68.217	ENSRNOG00000015411	Apobec1	56	68.217	Rattus_norvegicus
ENSSARG00000011972	-	99	69.466	ENSRBIG00000031161	APOBEC1	56	69.466	Rhinopithecus_bieti
ENSSARG00000011972	-	99	69.466	ENSRROG00000033576	APOBEC1	56	69.466	Rhinopithecus_roxellana
ENSSARG00000011972	-	99	70.992	ENSSBOG00000030587	APOBEC1	74	70.992	Saimiri_boliviensis_boliviensis
ENSSARG00000011972	-	98	65.116	ENSSHAG00000008925	APOBEC1	57	65.116	Sarcophilus_harrisii
ENSSARG00000011972	-	97	43.846	ENSSPUG00000009044	-	50	43.846	Sphenodon_punctatus
ENSSARG00000011972	-	100	75.000	ENSSSCG00000000668	APOBEC1	56	75.000	Sus_scrofa
ENSSARG00000011972	-	97	50.000	ENSTGUG00000013118	-	88	50.000	Taeniopygia_guttata
ENSSARG00000011972	-	99	68.702	ENSTBEG00000010043	APOBEC1	56	68.702	Tupaia_belangeri
ENSSARG00000011972	-	98	66.667	ENSTTRG00000014015	APOBEC1	69	66.667	Tursiops_truncatus
ENSSARG00000011972	-	100	73.485	ENSUAMG00000011636	APOBEC1	54	73.485	Ursus_americanus
ENSSARG00000011972	-	100	73.485	ENSUMAG00000016552	APOBEC1	54	73.485	Ursus_maritimus
ENSSARG00000011972	-	99	68.702	ENSVPAG00000001343	APOBEC1	56	68.702	Vicugna_pacos
ENSSARG00000011972	-	100	71.212	ENSVVUG00000010522	APOBEC1	56	71.212	Vulpes_vulpes