EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000012013 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 29762 bases
Position: chrGeneScaffold_945:778-30539
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000010850	zf-C3HC	PF07967.13	1.3e-22	1	1
ENSSARP00000010850	Rsm1	PF08600.10	2.9e-16	1	2
ENSSARP00000010850	Rsm1	PF08600.10	2.9e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000012012	ZC3HC1-201	1509	-	ENSSARP00000010850	502 (aa)	-	UPI000158095B

Gene Model

Click here to download ENSSARG00000012013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000012013's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000012013	ZC3HC1	99	78.800	ENSG00000091732	ZC3HC1	99	78.800	Homo_sapiens
ENSSARG00000012013	ZC3HC1	96	40.600	ENSAPOG00000009078	zc3hc1	96	40.000	Acanthochromis_polyacanthus
ENSSARG00000012013	ZC3HC1	99	78.926	ENSAMEG00000005425	ZC3HC1	99	78.926	Ailuropoda_melanoleuca
ENSSARG00000012013	ZC3HC1	95	38.677	ENSACIG00000019513	zc3hc1	96	38.247	Amphilophus_citrinellus
ENSSARG00000012013	ZC3HC1	96	41.717	ENSAOCG00000024310	zc3hc1	96	41.317	Amphiprion_ocellaris
ENSSARG00000012013	ZC3HC1	96	41.717	ENSAPEG00000004907	zc3hc1	96	41.317	Amphiprion_percula
ENSSARG00000012013	ZC3HC1	80	42.857	ENSATEG00000016898	zc3hc1	84	42.180	Anabas_testudineus
ENSSARG00000012013	ZC3HC1	89	55.357	ENSAPLG00000003832	ZC3HC1	100	55.357	Anas_platyrhynchos
ENSSARG00000012013	ZC3HC1	95	57.906	ENSACAG00000001638	ZC3HC1	95	57.906	Anolis_carolinensis
ENSSARG00000012013	ZC3HC1	99	77.291	ENSANAG00000022213	ZC3HC1	96	82.000	Aotus_nancymaae
ENSSARG00000012013	ZC3HC1	87	41.538	ENSACLG00000025033	zc3hc1	95	41.099	Astatotilapia_calliptera
ENSSARG00000012013	ZC3HC1	94	38.831	ENSAMXG00000036792	zc3hc1	97	38.831	Astyanax_mexicanus
ENSSARG00000012013	ZC3HC1	99	77.445	ENSBTAG00000011247	ZC3HC1	99	77.445	Bos_taurus
ENSSARG00000012013	ZC3HC1	99	78.643	ENSCJAG00000010536	ZC3HC1	96	82.500	Callithrix_jacchus
ENSSARG00000012013	ZC3HC1	99	80.240	ENSCAFG00000028735	-	99	80.240	Canis_familiaris
ENSSARG00000012013	ZC3HC1	99	80.357	ENSCAFG00000001499	-	98	80.357	Canis_familiaris
ENSSARG00000012013	ZC3HC1	99	80.240	ENSCAFG00000029401	-	98	80.240	Canis_familiaris
ENSSARG00000012013	ZC3HC1	99	80.439	ENSCAFG00000031850	-	99	80.439	Canis_familiaris
ENSSARG00000012013	ZC3HC1	99	79.324	ENSCAFG00020023333	-	99	79.324	Canis_lupus_dingo
ENSSARG00000012013	ZC3HC1	99	80.439	ENSCAFG00020006829	-	99	80.439	Canis_lupus_dingo
ENSSARG00000012013	ZC3HC1	99	75.848	ENSCHIG00000014103	ZC3HC1	99	75.848	Capra_hircus
ENSSARG00000012013	ZC3HC1	99	77.246	ENSTSYG00000002843	ZC3HC1	99	77.246	Carlito_syrichta
ENSSARG00000012013	ZC3HC1	90	60.394	ENSCAPG00000016300	ZC3HC1	94	74.180	Cavia_aperea
ENSSARG00000012013	ZC3HC1	99	74.651	ENSCPOG00000014034	ZC3HC1	99	74.052	Cavia_porcellus
ENSSARG00000012013	ZC3HC1	75	81.507	ENSCCAG00000020384	ZC3HC1	100	81.498	Cebus_capucinus
ENSSARG00000012013	ZC3HC1	99	78.443	ENSCATG00000023130	ZC3HC1	99	78.443	Cercocebus_atys
ENSSARG00000012013	ZC3HC1	82	67.029	ENSCLAG00000008260	ZC3HC1	99	54.491	Chinchilla_lanigera
ENSSARG00000012013	ZC3HC1	67	81.899	ENSCSAG00000009881	ZC3HC1	89	81.899	Chlorocebus_sabaeus
ENSSARG00000012013	ZC3HC1	90	77.556	ENSCHOG00000011846	ZC3HC1	99	77.556	Choloepus_hoffmanni
ENSSARG00000012013	ZC3HC1	96	61.100	ENSCPBG00000017519	ZC3HC1	97	61.100	Chrysemys_picta_bellii
ENSSARG00000012013	ZC3HC1	99	78.443	ENSCANG00000029091	ZC3HC1	96	81.500	Colobus_angolensis_palliatus
ENSSARG00000012013	ZC3HC1	99	76.647	ENSCGRG00001018805	Zc3hc1	99	76.647	Cricetulus_griseus_chok1gshd
ENSSARG00000012013	ZC3HC1	99	75.449	ENSCGRG00000017114	Zc3hc1	99	75.449	Cricetulus_griseus_crigri
ENSSARG00000012013	ZC3HC1	98	38.552	ENSCSEG00000009284	zc3hc1	97	38.552	Cynoglossus_semilaevis
ENSSARG00000012013	ZC3HC1	94	37.649	ENSCVAG00000011566	zc3hc1	95	37.052	Cyprinodon_variegatus
ENSSARG00000012013	ZC3HC1	96	44.130	ENSDARG00000062651	zc3hc1	96	44.130	Danio_rerio
ENSSARG00000012013	ZC3HC1	99	77.445	ENSDNOG00000045016	ZC3HC1	99	77.445	Dasypus_novemcinctus
ENSSARG00000012013	ZC3HC1	99	68.663	ENSDORG00000008697	Zc3hc1	99	68.663	Dipodomys_ordii
ENSSARG00000012013	ZC3HC1	90	78.540	ENSEASG00005008789	ZC3HC1	97	78.540	Equus_asinus_asinus
ENSSARG00000012013	ZC3HC1	99	77.689	ENSECAG00000017886	ZC3HC1	99	77.689	Equus_caballus
ENSSARG00000012013	ZC3HC1	83	77.778	ENSEEUG00000003123	ZC3HC1	83	77.778	Erinaceus_europaeus
ENSSARG00000012013	ZC3HC1	96	41.071	ENSELUG00000023168	zc3hc1	99	41.051	Esox_lucius
ENSSARG00000012013	ZC3HC1	99	79.641	ENSFCAG00000010429	ZC3HC1	99	79.641	Felis_catus
ENSSARG00000012013	ZC3HC1	90	53.419	ENSFALG00000005006	ZC3HC1	100	54.060	Ficedula_albicollis
ENSSARG00000012013	ZC3HC1	99	75.050	ENSFDAG00000019897	ZC3HC1	99	75.050	Fukomys_damarensis
ENSSARG00000012013	ZC3HC1	96	38.878	ENSFHEG00000020149	zc3hc1	96	38.105	Fundulus_heteroclitus
ENSSARG00000012013	ZC3HC1	94	37.214	ENSGMOG00000002914	zc3hc1	95	36.777	Gadus_morhua
ENSSARG00000012013	ZC3HC1	98	56.048	ENSGALG00000008003	ZC3HC1	99	56.048	Gallus_gallus
ENSSARG00000012013	ZC3HC1	96	39.798	ENSGAFG00000016095	zc3hc1	96	39.235	Gambusia_affinis
ENSSARG00000012013	ZC3HC1	94	41.429	ENSGACG00000019706	zc3hc1	95	40.650	Gasterosteus_aculeatus
ENSSARG00000012013	ZC3HC1	77	60.859	ENSGAGG00000016106	ZC3HC1	100	60.859	Gopherus_agassizii
ENSSARG00000012013	ZC3HC1	99	78.600	ENSGGOG00000015504	ZC3HC1	96	82.412	Gorilla_gorilla
ENSSARG00000012013	ZC3HC1	94	39.474	ENSHBUG00000008347	zc3hc1	95	39.069	Haplochromis_burtoni
ENSSARG00000012013	ZC3HC1	99	76.846	ENSHGLG00000005085	ZC3HC1	99	76.846	Heterocephalus_glaber_female
ENSSARG00000012013	ZC3HC1	99	76.647	ENSHGLG00100011395	ZC3HC1	99	76.647	Heterocephalus_glaber_male
ENSSARG00000012013	ZC3HC1	95	39.506	ENSHCOG00000014309	zc3hc1	95	39.264	Hippocampus_comes
ENSSARG00000012013	ZC3HC1	99	77.046	ENSSTOG00000023599	-	99	77.046	Ictidomys_tridecemlineatus
ENSSARG00000012013	ZC3HC1	94	40.937	ENSKMAG00000015315	zc3hc1	89	39.351	Kryptolebias_marmoratus
ENSSARG00000012013	ZC3HC1	95	39.920	ENSLBEG00000017325	zc3hc1	95	39.321	Labrus_bergylta
ENSSARG00000012013	ZC3HC1	78	48.058	ENSLACG00000013032	ZC3HC1	97	48.058	Latimeria_chalumnae
ENSSARG00000012013	ZC3HC1	98	46.429	ENSLOCG00000015963	zc3hc1	98	46.931	Lepisosteus_oculatus
ENSSARG00000012013	ZC3HC1	99	77.822	ENSLAFG00000001292	ZC3HC1	99	77.822	Loxodonta_africana
ENSSARG00000012013	ZC3HC1	99	78.643	ENSMFAG00000030176	ZC3HC1	99	78.643	Macaca_fascicularis
ENSSARG00000012013	ZC3HC1	99	77.689	ENSMMUG00000006155	ZC3HC1	99	78.171	Macaca_mulatta
ENSSARG00000012013	ZC3HC1	99	78.842	ENSMNEG00000011833	ZC3HC1	100	81.132	Macaca_nemestrina
ENSSARG00000012013	ZC3HC1	99	78.643	ENSMLEG00000027328	ZC3HC1	96	82.000	Mandrillus_leucophaeus
ENSSARG00000012013	ZC3HC1	94	40.854	ENSMAMG00000010691	zc3hc1	95	40.606	Mastacembelus_armatus
ENSSARG00000012013	ZC3HC1	94	39.676	ENSMZEG00005007142	zc3hc1	95	39.271	Maylandia_zebra
ENSSARG00000012013	ZC3HC1	98	56.040	ENSMGAG00000002977	ZC3HC1	99	56.436	Meleagris_gallopavo
ENSSARG00000012013	ZC3HC1	82	76.098	ENSMAUG00000017032	Zc3hc1	92	76.098	Mesocricetus_auratus
ENSSARG00000012013	ZC3HC1	99	77.844	ENSMICG00000009167	ZC3HC1	99	77.844	Microcebus_murinus
ENSSARG00000012013	ZC3HC1	99	75.848	ENSMOCG00000015239	Zc3hc1	99	75.848	Microtus_ochrogaster
ENSSARG00000012013	ZC3HC1	86	39.560	ENSMMOG00000002204	zc3hc1	99	38.681	Mola_mola
ENSSARG00000012013	ZC3HC1	99	57.336	ENSMODG00000014630	ZC3HC1	97	66.197	Monodelphis_domestica
ENSSARG00000012013	ZC3HC1	94	40.122	ENSMALG00000014447	zc3hc1	96	40.000	Monopterus_albus
ENSSARG00000012013	ZC3HC1	99	74.651	MGP_CAROLIEiJ_G0028183	Zc3hc1	99	74.651	Mus_caroli
ENSSARG00000012013	ZC3HC1	99	74.251	ENSMUSG00000039130	Zc3hc1	99	74.251	Mus_musculus
ENSSARG00000012013	ZC3HC1	99	74.052	MGP_PahariEiJ_G0021941	Zc3hc1	99	74.052	Mus_pahari
ENSSARG00000012013	ZC3HC1	99	74.451	MGP_SPRETEiJ_G0029183	Zc3hc1	99	74.451	Mus_spretus
ENSSARG00000012013	ZC3HC1	95	79.332	ENSMPUG00000005297	ZC3HC1	95	79.332	Mustela_putorius_furo
ENSSARG00000012013	ZC3HC1	99	76.984	ENSMLUG00000000063	-	99	76.984	Myotis_lucifugus
ENSSARG00000012013	ZC3HC1	67	76.991	ENSMLUG00000029228	-	98	76.991	Myotis_lucifugus
ENSSARG00000012013	ZC3HC1	99	77.137	ENSNGAG00000019014	Zc3hc1	99	77.137	Nannospalax_galili
ENSSARG00000012013	ZC3HC1	94	39.837	ENSNBRG00000004577	zc3hc1	95	39.148	Neolamprologus_brichardi
ENSSARG00000012013	ZC3HC1	99	78.200	ENSNLEG00000012698	ZC3HC1	99	78.200	Nomascus_leucogenys
ENSSARG00000012013	ZC3HC1	98	70.445	ENSMEUG00000011023	ZC3HC1	98	70.445	Notamacropus_eugenii
ENSSARG00000012013	ZC3HC1	65	70.428	ENSOPRG00000007867	-	66	70.428	Ochotona_princeps
ENSSARG00000012013	ZC3HC1	99	74.850	ENSODEG00000014604	ZC3HC1	99	74.651	Octodon_degus
ENSSARG00000012013	ZC3HC1	94	40.365	ENSONIG00000011644	zc3hc1	95	39.676	Oreochromis_niloticus
ENSSARG00000012013	ZC3HC1	90	64.009	ENSOANG00000011460	ZC3HC1	100	64.224	Ornithorhynchus_anatinus
ENSSARG00000012013	ZC3HC1	99	74.802	ENSOCUG00000017137	ZC3HC1	99	74.802	Oryctolagus_cuniculus
ENSSARG00000012013	ZC3HC1	95	40.486	ENSORLG00000014409	zc3hc1	95	39.880	Oryzias_latipes
ENSSARG00000012013	ZC3HC1	95	40.283	ENSORLG00020015874	zc3hc1	95	39.679	Oryzias_latipes_hni
ENSSARG00000012013	ZC3HC1	95	40.081	ENSORLG00015014641	zc3hc1	95	39.479	Oryzias_latipes_hsok
ENSSARG00000012013	ZC3HC1	95	41.615	ENSOMEG00000020604	zc3hc1	95	41.189	Oryzias_melastigma
ENSSARG00000012013	ZC3HC1	95	41.615	ENSOMEG00000000215	zc3hc1	95	41.189	Oryzias_melastigma
ENSSARG00000012013	ZC3HC1	99	71.657	ENSOGAG00000026193	ZC3HC1	99	71.657	Otolemur_garnettii
ENSSARG00000012013	ZC3HC1	99	78.373	ENSOARG00000004907	ZC3HC1	98	78.373	Ovis_aries
ENSSARG00000012013	ZC3HC1	99	78.800	ENSPPAG00000043172	ZC3HC1	96	82.412	Pan_paniscus
ENSSARG00000012013	ZC3HC1	99	78.842	ENSPPRG00000001004	ZC3HC1	99	79.056	Panthera_pardus
ENSSARG00000012013	ZC3HC1	99	79.242	ENSPTIG00000007823	ZC3HC1	99	79.242	Panthera_tigris_altaica
ENSSARG00000012013	ZC3HC1	99	78.800	ENSPTRG00000019685	ZC3HC1	96	82.412	Pan_troglodytes
ENSSARG00000012013	ZC3HC1	99	77.291	ENSPANG00000014229	ZC3HC1	96	82.000	Papio_anubis
ENSSARG00000012013	ZC3HC1	95	44.330	ENSPKIG00000007172	zc3hc1	96	44.330	Paramormyrops_kingsleyae
ENSSARG00000012013	ZC3HC1	93	55.765	ENSPSIG00000016646	ZC3HC1	99	53.516	Pelodiscus_sinensis
ENSSARG00000012013	ZC3HC1	90	38.723	ENSPMGG00000003548	zc3hc1	96	34.576	Periophthalmus_magnuspinnatus
ENSSARG00000012013	ZC3HC1	99	75.848	ENSPEMG00000000514	Zc3hc1	99	75.848	Peromyscus_maniculatus_bairdii
ENSSARG00000012013	ZC3HC1	97	68.033	ENSPCIG00000020619	ZC3HC1	100	69.409	Phascolarctos_cinereus
ENSSARG00000012013	ZC3HC1	96	39.596	ENSPFOG00000003466	zc3hc1	96	39.437	Poecilia_formosa
ENSSARG00000012013	ZC3HC1	96	38.945	ENSPLAG00000022211	zc3hc1	96	38.788	Poecilia_latipinna
ENSSARG00000012013	ZC3HC1	96	39.596	ENSPMEG00000001458	zc3hc1	96	39.437	Poecilia_mexicana
ENSSARG00000012013	ZC3HC1	96	39.394	ENSPREG00000004004	zc3hc1	96	38.833	Poecilia_reticulata
ENSSARG00000012013	ZC3HC1	99	72.000	ENSPPYG00000017998	ZC3HC1	99	72.000	Pongo_abelii
ENSSARG00000012013	ZC3HC1	92	72.826	ENSPCAG00000001182	ZC3HC1	100	72.826	Procavia_capensis
ENSSARG00000012013	ZC3HC1	99	78.244	ENSPCOG00000017354	ZC3HC1	99	78.244	Propithecus_coquereli
ENSSARG00000012013	ZC3HC1	99	73.054	ENSPVAG00000003195	ZC3HC1	99	73.054	Pteropus_vampyrus
ENSSARG00000012013	ZC3HC1	94	39.676	ENSPNYG00000020692	zc3hc1	95	39.271	Pundamilia_nyererei
ENSSARG00000012013	ZC3HC1	93	41.053	ENSPNAG00000020746	zc3hc1	95	40.966	Pygocentrus_nattereri
ENSSARG00000012013	ZC3HC1	99	74.502	ENSRNOG00000010154	Zc3hc1	99	74.502	Rattus_norvegicus
ENSSARG00000012013	ZC3HC1	90	78.146	ENSRBIG00000029409	ZC3HC1	100	79.717	Rhinopithecus_bieti
ENSSARG00000012013	ZC3HC1	99	78.244	ENSRROG00000041831	ZC3HC1	99	78.244	Rhinopithecus_roxellana
ENSSARG00000012013	ZC3HC1	86	85.185	ENSSBOG00000032787	ZC3HC1	99	85.185	Saimiri_boliviensis_boliviensis
ENSSARG00000012013	ZC3HC1	92	70.108	ENSSHAG00000002529	ZC3HC1	100	70.108	Sarcophilus_harrisii
ENSSARG00000012013	ZC3HC1	96	45.010	ENSSFOG00015003667	zc3hc1	92	44.355	Scleropages_formosus
ENSSARG00000012013	ZC3HC1	95	40.041	ENSSMAG00000000647	zc3hc1	86	40.162	Scophthalmus_maximus
ENSSARG00000012013	ZC3HC1	96	40.792	ENSSDUG00000004241	zc3hc1	94	40.354	Seriola_dumerili
ENSSARG00000012013	ZC3HC1	96	40.396	ENSSLDG00000025056	zc3hc1	94	39.961	Seriola_lalandi_dorsalis
ENSSARG00000012013	ZC3HC1	86	52.874	ENSSPUG00000000778	ZC3HC1	86	52.874	Sphenodon_punctatus
ENSSARG00000012013	ZC3HC1	96	40.964	ENSSPAG00000020041	zc3hc1	96	40.400	Stegastes_partitus
ENSSARG00000012013	ZC3HC1	99	77.844	ENSSSCG00000016565	ZC3HC1	99	77.844	Sus_scrofa
ENSSARG00000012013	ZC3HC1	98	37.695	ENSTRUG00000020077	zc3hc1	99	37.500	Takifugu_rubripes
ENSSARG00000012013	ZC3HC1	95	39.351	ENSTNIG00000007585	zc3hc1	99	38.086	Tetraodon_nigroviridis
ENSSARG00000012013	ZC3HC1	84	80.000	ENSTBEG00000005216	ZC3HC1	84	80.000	Tupaia_belangeri
ENSSARG00000012013	ZC3HC1	95	78.125	ENSTTRG00000008458	ZC3HC1	100	78.125	Tursiops_truncatus
ENSSARG00000012013	ZC3HC1	99	79.242	ENSUAMG00000020249	ZC3HC1	99	79.242	Ursus_americanus
ENSSARG00000012013	ZC3HC1	99	79.042	ENSUMAG00000009268	ZC3HC1	99	79.042	Ursus_maritimus
ENSSARG00000012013	ZC3HC1	77	86.726	ENSVPAG00000010846	ZC3HC1	77	86.726	Vicugna_pacos
ENSSARG00000012013	ZC3HC1	95	80.126	ENSVVUG00000012386	ZC3HC1	99	80.126	Vulpes_vulpes
ENSSARG00000012013	ZC3HC1	90	47.598	ENSXETG00000033900	zc3hc1	94	46.507	Xenopus_tropicalis
ENSSARG00000012013	ZC3HC1	96	38.586	ENSXCOG00000013570	zc3hc1	96	38.028	Xiphophorus_couchianus
ENSSARG00000012013	ZC3HC1	87	40.839	ENSXMAG00000010979	zc3hc1	95	40.220	Xiphophorus_maculatus