EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000012207 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 101509 bases
Position: chrGeneScaffold_6336:79811-181319
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000011049	SpoU_methylase	PF00588.19	2.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000012234	TARBP1-201	4851	-	ENSSARP00000011049	1616 (aa)	-	UPI0001581FBB

Gene Model

Click here to download ENSSARG00000012207's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000012207's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000012207	TARBP1	89	85.484	ENSG00000059588	TARBP1	89	85.484	Homo_sapiens
ENSSARG00000012207	TARBP1	76	58.161	ENSAPOG00000016419	si:dkey-85a20.4	75	57.870	Acanthochromis_polyacanthus
ENSSARG00000012207	TARBP1	76	84.562	ENSAMEG00000003359	TARBP1	90	84.562	Ailuropoda_melanoleuca
ENSSARG00000012207	TARBP1	75	57.176	ENSATEG00000020266	si:dkey-85a20.4	75	57.176	Anabas_testudineus
ENSSARG00000012207	TARBP1	76	78.372	ENSAPLG00000007666	TARBP1	94	78.372	Anas_platyrhynchos
ENSSARG00000012207	TARBP1	88	68.599	ENSACAG00000001142	TARBP1	87	68.599	Anolis_carolinensis
ENSSARG00000012207	TARBP1	81	85.023	ENSANAG00000022031	TARBP1	83	85.023	Aotus_nancymaae
ENSSARG00000012207	TARBP1	89	86.744	ENSBTAG00000004517	TARBP1	89	86.744	Bos_taurus
ENSSARG00000012207	TARBP1	89	84.793	ENSCJAG00000018155	TARBP1	89	84.793	Callithrix_jacchus
ENSSARG00000012207	TARBP1	76	84.793	ENSCAFG00000011533	TARBP1	87	84.793	Canis_familiaris
ENSSARG00000012207	TARBP1	89	84.793	ENSCAFG00020027141	TARBP1	89	84.793	Canis_lupus_dingo
ENSSARG00000012207	TARBP1	89	86.512	ENSCHIG00000011437	TARBP1	89	86.512	Capra_hircus
ENSSARG00000012207	TARBP1	76	85.253	ENSTSYG00000010382	TARBP1	91	85.253	Carlito_syrichta
ENSSARG00000012207	TARBP1	74	69.124	ENSCAPG00000010831	TARBP1	93	69.124	Cavia_aperea
ENSSARG00000012207	TARBP1	89	76.443	ENSCPOG00000013995	TARBP1	89	76.443	Cavia_porcellus
ENSSARG00000012207	TARBP1	89	84.793	ENSCCAG00000037278	TARBP1	89	84.793	Cebus_capucinus
ENSSARG00000012207	TARBP1	89	85.219	ENSCATG00000011754	TARBP1	89	85.219	Cercocebus_atys
ENSSARG00000012207	TARBP1	79	76.905	ENSCLAG00000003655	TARBP1	93	76.905	Chinchilla_lanigera
ENSSARG00000012207	TARBP1	75	85.681	ENSCSAG00000010100	TARBP1	94	85.681	Chlorocebus_sabaeus
ENSSARG00000012207	TARBP1	83	75.731	ENSCPBG00000005587	TARBP1	86	75.731	Chrysemys_picta_bellii
ENSSARG00000012207	TARBP1	76	84.793	ENSCANG00000034343	TARBP1	90	84.793	Colobus_angolensis_palliatus
ENSSARG00000012207	TARBP1	89	78.472	ENSCGRG00001016690	Tarbp1	89	78.472	Cricetulus_griseus_chok1gshd
ENSSARG00000012207	TARBP1	76	78.472	ENSCGRG00000016893	Tarbp1	84	78.472	Cricetulus_griseus_crigri
ENSSARG00000012207	TARBP1	76	52.887	ENSCSEG00000005255	si:dkey-85a20.4	70	57.044	Cynoglossus_semilaevis
ENSSARG00000012207	TARBP1	75	54.197	ENSDARG00000079055	si:dkey-85a20.4	84	54.588	Danio_rerio
ENSSARG00000012207	TARBP1	89	87.760	ENSDNOG00000008637	TARBP1	89	87.760	Dasypus_novemcinctus
ENSSARG00000012207	TARBP1	75	72.770	ENSDORG00000007984	Tarbp1	94	72.770	Dipodomys_ordii
ENSSARG00000012207	TARBP1	89	88.940	ENSEASG00005000252	TARBP1	89	88.940	Equus_asinus_asinus
ENSSARG00000012207	TARBP1	89	88.710	ENSECAG00000023673	TARBP1	89	88.710	Equus_caballus
ENSSARG00000012207	TARBP1	75	53.052	ENSELUG00000012193	si:dkey-85a20.4	76	53.052	Esox_lucius
ENSSARG00000012207	TARBP1	89	85.253	ENSFCAG00000014183	TARBP1	89	85.253	Felis_catus
ENSSARG00000012207	TARBP1	76	76.941	ENSFALG00000013565	TARBP1	94	76.744	Ficedula_albicollis
ENSSARG00000012207	TARBP1	75	72.113	ENSFDAG00000001308	TARBP1	94	72.113	Fukomys_damarensis
ENSSARG00000012207	TARBP1	71	54.520	ENSFHEG00000007565	si:dkey-85a20.4	74	54.520	Fundulus_heteroclitus
ENSSARG00000012207	TARBP1	76	53.075	ENSGMOG00000004549	si:dkey-85a20.4	89	53.303	Gadus_morhua
ENSSARG00000012207	TARBP1	88	73.488	ENSGALG00000011000	TARBP1	89	73.488	Gallus_gallus
ENSSARG00000012207	TARBP1	76	58.581	ENSGAFG00000007387	si:dkey-85a20.4	76	58.581	Gambusia_affinis
ENSSARG00000012207	TARBP1	76	57.011	ENSGACG00000005865	si:dkey-85a20.4	87	57.011	Gasterosteus_aculeatus
ENSSARG00000012207	TARBP1	84	79.535	ENSGAGG00000012102	TARBP1	87	79.535	Gopherus_agassizii
ENSSARG00000012207	TARBP1	76	81.454	ENSGGOG00000022879	TARBP1	89	81.454	Gorilla_gorilla
ENSSARG00000012207	TARBP1	76	58.796	ENSHBUG00000008877	si:dkey-85a20.4	75	58.796	Haplochromis_burtoni
ENSSARG00000012207	TARBP1	89	76.905	ENSHGLG00000011592	TARBP1	89	76.905	Heterocephalus_glaber_female
ENSSARG00000012207	TARBP1	84	76.905	ENSHGLG00100015169	TARBP1	92	76.905	Heterocephalus_glaber_male
ENSSARG00000012207	TARBP1	74	56.174	ENSIPUG00000005249	si:dkey-85a20.4	73	56.174	Ictalurus_punctatus
ENSSARG00000012207	TARBP1	80	76.977	ENSSTOG00000032291	TARBP1	92	76.977	Ictidomys_tridecemlineatus
ENSSARG00000012207	TARBP1	84	73.903	ENSJJAG00000017840	Tarbp1	92	73.903	Jaculus_jaculus
ENSSARG00000012207	TARBP1	56	56.713	ENSKMAG00000017546	si:dkey-85a20.4	60	57.407	Kryptolebias_marmoratus
ENSSARG00000012207	TARBP1	57	56.351	ENSLBEG00000012132	si:dkey-85a20.4	64	56.351	Labrus_bergylta
ENSSARG00000012207	TARBP1	76	64.501	ENSLACG00000004337	TARBP1	75	64.501	Latimeria_chalumnae
ENSSARG00000012207	TARBP1	76	58.837	ENSLOCG00000016214	si:dkey-85a20.4	75	58.837	Lepisosteus_oculatus
ENSSARG00000012207	TARBP1	85	85.047	ENSLAFG00000011394	TARBP1	87	85.047	Loxodonta_africana
ENSSARG00000012207	TARBP1	89	85.219	ENSMFAG00000041068	TARBP1	89	85.219	Macaca_fascicularis
ENSSARG00000012207	TARBP1	89	85.219	ENSMMUG00000021703	TARBP1	89	85.219	Macaca_mulatta
ENSSARG00000012207	TARBP1	89	85.219	ENSMNEG00000045002	TARBP1	89	85.219	Macaca_nemestrina
ENSSARG00000012207	TARBP1	76	85.219	ENSMLEG00000044182	TARBP1	91	85.219	Mandrillus_leucophaeus
ENSSARG00000012207	TARBP1	76	58.542	ENSMAMG00000021760	si:dkey-85a20.4	77	58.542	Mastacembelus_armatus
ENSSARG00000012207	TARBP1	76	58.565	ENSMZEG00005005751	si:dkey-85a20.4	75	58.565	Maylandia_zebra
ENSSARG00000012207	TARBP1	89	78.704	ENSMAUG00000020968	Tarbp1	89	78.704	Mesocricetus_auratus
ENSSARG00000012207	TARBP1	89	75.649	ENSMICG00000015280	TARBP1	87	75.649	Microcebus_murinus
ENSSARG00000012207	TARBP1	89	77.855	ENSMOCG00000004128	Tarbp1	89	77.855	Microtus_ochrogaster
ENSSARG00000012207	TARBP1	75	56.731	ENSMMOG00000007795	si:dkey-85a20.4	75	56.325	Mola_mola
ENSSARG00000012207	TARBP1	89	81.713	ENSMODG00000008504	TARBP1	89	81.713	Monodelphis_domestica
ENSSARG00000012207	TARBP1	75	58.057	ENSMALG00000002916	si:dkey-85a20.4	75	58.057	Monopterus_albus
ENSSARG00000012207	TARBP1	89	76.852	MGP_CAROLIEiJ_G0031729	Tarbp1	89	76.852	Mus_caroli
ENSSARG00000012207	TARBP1	89	76.674	ENSMUSG00000090290	Tarbp1	89	76.674	Mus_musculus
ENSSARG00000012207	TARBP1	89	77.367	MGP_PahariEiJ_G0023326	Tarbp1	89	77.367	Mus_pahari
ENSSARG00000012207	TARBP1	89	76.959	MGP_SPRETEiJ_G0032846	Tarbp1	89	76.959	Mus_spretus
ENSSARG00000012207	TARBP1	72	83.023	ENSMPUG00000002802	TARBP1	93	83.023	Mustela_putorius_furo
ENSSARG00000012207	TARBP1	76	76.512	ENSMLUG00000002414	TARBP1	90	76.512	Myotis_lucifugus
ENSSARG00000012207	TARBP1	89	85.714	ENSNLEG00000002518	TARBP1	89	85.714	Nomascus_leucogenys
ENSSARG00000012207	TARBP1	55	77.367	ENSMEUG00000011370	-	55	77.367	Notamacropus_eugenii
ENSSARG00000012207	TARBP1	59	81.250	ENSOPRG00000013822	TARBP1	59	81.250	Ochotona_princeps
ENSSARG00000012207	TARBP1	89	75.982	ENSODEG00000005238	TARBP1	89	75.982	Octodon_degus
ENSSARG00000012207	TARBP1	76	59.028	ENSONIG00000009789	si:dkey-85a20.4	88	59.028	Oreochromis_niloticus
ENSSARG00000012207	TARBP1	89	81.579	ENSOCUG00000017418	TARBP1	88	81.579	Oryctolagus_cuniculus
ENSSARG00000012207	TARBP1	76	54.988	ENSORLG00000010529	si:dkey-85a20.4	75	54.988	Oryzias_latipes
ENSSARG00000012207	TARBP1	76	54.756	ENSORLG00020019264	si:dkey-85a20.4	75	54.756	Oryzias_latipes_hni
ENSSARG00000012207	TARBP1	76	54.398	ENSORLG00015003276	si:dkey-85a20.4	75	54.398	Oryzias_latipes_hsok
ENSSARG00000012207	TARBP1	89	78.753	ENSOGAG00000002379	TARBP1	89	78.753	Otolemur_garnettii
ENSSARG00000012207	TARBP1	79	86.977	ENSOARG00000003434	TARBP1	88	86.977	Ovis_aries
ENSSARG00000012207	TARBP1	76	85.714	ENSPPAG00000028097	TARBP1	90	85.714	Pan_paniscus
ENSSARG00000012207	TARBP1	86	85.253	ENSPPRG00000013561	TARBP1	90	85.253	Panthera_pardus
ENSSARG00000012207	TARBP1	76	85.484	ENSPTIG00000009281	TARBP1	91	85.484	Panthera_tigris_altaica
ENSSARG00000012207	TARBP1	89	85.714	ENSPTRG00000002124	TARBP1	89	85.714	Pan_troglodytes
ENSSARG00000012207	TARBP1	89	84.988	ENSPANG00000021933	TARBP1	89	84.988	Papio_anubis
ENSSARG00000012207	TARBP1	76	54.382	ENSPKIG00000016716	si:dkey-85a20.4	75	54.382	Paramormyrops_kingsleyae
ENSSARG00000012207	TARBP1	74	78.837	ENSPSIG00000010699	TARBP1	94	78.837	Pelodiscus_sinensis
ENSSARG00000012207	TARBP1	83	78.984	ENSPEMG00000006888	Tarbp1	87	78.984	Peromyscus_maniculatus_bairdii
ENSSARG00000012207	TARBP1	81	81.373	ENSPCIG00000029710	TARBP1	87	81.373	Phascolarctos_cinereus
ENSSARG00000012207	TARBP1	75	57.823	ENSPFOG00000013020	si:dkey-85a20.4	88	58.050	Poecilia_formosa
ENSSARG00000012207	TARBP1	75	57.534	ENSPLAG00000006044	si:dkey-85a20.4	76	57.763	Poecilia_latipinna
ENSSARG00000012207	TARBP1	75	57.763	ENSPMEG00000017857	si:dkey-85a20.4	76	57.991	Poecilia_mexicana
ENSSARG00000012207	TARBP1	75	58.333	ENSPREG00000022753	si:dkey-85a20.4	75	58.565	Poecilia_reticulata
ENSSARG00000012207	TARBP1	80	92.727	ENSPPYG00000000102	TARBP1	88	92.727	Pongo_abelii
ENSSARG00000012207	TARBP1	74	89.262	ENSPCAG00000004808	TARBP1	74	89.262	Procavia_capensis
ENSSARG00000012207	TARBP1	89	85.023	ENSPCOG00000005666	TARBP1	90	85.023	Propithecus_coquereli
ENSSARG00000012207	TARBP1	84	85.075	ENSPVAG00000014798	TARBP1	85	85.075	Pteropus_vampyrus
ENSSARG00000012207	TARBP1	76	58.333	ENSPNYG00000019135	si:dkey-85a20.4	75	58.333	Pundamilia_nyererei
ENSSARG00000012207	TARBP1	89	74.074	ENSRNOG00000053574	Tarbp1	89	74.074	Rattus_norvegicus
ENSSARG00000012207	TARBP1	86	85.253	ENSRBIG00000043362	TARBP1	88	85.253	Rhinopithecus_bieti
ENSSARG00000012207	TARBP1	89	85.253	ENSRROG00000029527	TARBP1	88	85.253	Rhinopithecus_roxellana
ENSSARG00000012207	TARBP1	82	85.253	ENSSBOG00000034503	TARBP1	92	85.253	Saimiri_boliviensis_boliviensis
ENSSARG00000012207	TARBP1	76	82.258	ENSSHAG00000000013	TARBP1	91	82.258	Sarcophilus_harrisii
ENSSARG00000012207	TARBP1	76	55.023	ENSSFOG00015002660	si:dkey-85a20.4	90	55.023	Scleropages_formosus
ENSSARG00000012207	TARBP1	76	57.176	ENSSMAG00000007081	si:dkey-85a20.4	74	57.407	Scophthalmus_maximus
ENSSARG00000012207	TARBP1	76	54.779	ENSSDUG00000023566	si:dkey-85a20.4	75	54.779	Seriola_dumerili
ENSSARG00000012207	TARBP1	76	58.508	ENSSLDG00000020200	si:dkey-85a20.4	75	58.508	Seriola_lalandi_dorsalis
ENSSARG00000012207	TARBP1	89	79.254	ENSSPUG00000015364	TARBP1	88	79.254	Sphenodon_punctatus
ENSSARG00000012207	TARBP1	76	57.639	ENSSPAG00000007213	si:dkey-85a20.4	75	57.639	Stegastes_partitus
ENSSARG00000012207	TARBP1	84	92.683	ENSSSCG00000010160	TARBP1	88	92.683	Sus_scrofa
ENSSARG00000012207	TARBP1	76	75.291	ENSTGUG00000010214	TARBP1	94	75.291	Taeniopygia_guttata
ENSSARG00000012207	TARBP1	76	56.720	ENSTNIG00000016586	si:dkey-85a20.4	90	56.720	Tetraodon_nigroviridis
ENSSARG00000012207	TARBP1	82	86.761	ENSTTRG00000008707	TARBP1	86	86.761	Tursiops_truncatus
ENSSARG00000012207	TARBP1	76	84.562	ENSUMAG00000006730	TARBP1	92	84.562	Ursus_maritimus
ENSSARG00000012207	TARBP1	69	93.750	ENSVPAG00000007665	TARBP1	72	93.750	Vicugna_pacos
ENSSARG00000012207	TARBP1	76	84.562	ENSVVUG00000007460	TARBP1	90	84.562	Vulpes_vulpes
ENSSARG00000012207	TARBP1	76	60.829	ENSXETG00000016224	tarbp1	90	60.829	Xenopus_tropicalis
ENSSARG00000012207	TARBP1	67	57.933	ENSXCOG00000011779	si:dkey-85a20.4	81	58.173	Xiphophorus_couchianus
ENSSARG00000012207	TARBP1	60	54.805	ENSXMAG00000009600	si:dkey-85a20.4	93	54.805	Xiphophorus_maculatus