EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000012227 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 23774 bases
Position: chrGeneScaffold_3104:7956-31729
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000011053	tRNA-synt_1b	PF00579.25	1.1e-49	1	2
ENSSARP00000011053	tRNA-synt_1b	PF00579.25	1.1e-49	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000012238	-	1581	-	ENSSARP00000011053	526 (aa)	-	UPI00015817B8

Gene Model

Click here to download ENSSARG00000012227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000012227's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000012227	-	86	82.784	ENSG00000134684	YARS	86	82.784	Homo_sapiens
ENSSARG00000012227	-	84	73.529	ENSAPOG00000020788	yars	84	73.529	Acanthochromis_polyacanthus
ENSSARG00000012227	-	86	82.051	ENSAMEG00000007476	YARS	86	82.051	Ailuropoda_melanoleuca
ENSSARG00000012227	-	86	73.162	ENSACIG00000017504	yars	87	73.162	Amphilophus_citrinellus
ENSSARG00000012227	-	84	74.632	ENSAOCG00000009987	yars	84	74.632	Amphiprion_ocellaris
ENSSARG00000012227	-	84	74.632	ENSAPEG00000001273	yars	84	74.632	Amphiprion_percula
ENSSARG00000012227	-	84	73.897	ENSATEG00000005301	yars	84	73.897	Anabas_testudineus
ENSSARG00000012227	-	83	76.628	ENSAPLG00000005739	YARS	84	76.628	Anas_platyrhynchos
ENSSARG00000012227	-	86	77.289	ENSACAG00000003568	YARS	86	77.289	Anolis_carolinensis
ENSSARG00000012227	-	86	82.418	ENSANAG00000034533	YARS	86	82.418	Aotus_nancymaae
ENSSARG00000012227	-	83	71.691	ENSACLG00000004618	yars	86	71.691	Astatotilapia_calliptera
ENSSARG00000012227	-	86	73.993	ENSAMXG00000010993	yars	86	73.993	Astyanax_mexicanus
ENSSARG00000012227	-	86	80.586	ENSBTAG00000018065	YARS	86	80.586	Bos_taurus
ENSSARG00000012227	-	85	82.051	ENSCJAG00000001037	YARS	85	82.051	Callithrix_jacchus
ENSSARG00000012227	-	86	83.150	ENSCAFG00000010481	YARS	80	83.150	Canis_familiaris
ENSSARG00000012227	-	85	83.150	ENSCAFG00020025379	YARS	85	83.150	Canis_lupus_dingo
ENSSARG00000012227	-	86	80.586	ENSCHIG00000014340	YARS	86	80.586	Capra_hircus
ENSSARG00000012227	-	86	82.418	ENSTSYG00000005019	YARS	86	82.418	Carlito_syrichta
ENSSARG00000012227	-	65	98.131	ENSCAPG00000008627	YARS	91	98.131	Cavia_aperea
ENSSARG00000012227	-	86	80.586	ENSCPOG00000009614	YARS	80	80.586	Cavia_porcellus
ENSSARG00000012227	-	86	82.784	ENSCCAG00000036757	YARS	84	82.784	Cebus_capucinus
ENSSARG00000012227	-	86	82.784	ENSCATG00000044394	YARS	86	82.784	Cercocebus_atys
ENSSARG00000012227	-	86	81.319	ENSCLAG00000008977	YARS	80	81.319	Chinchilla_lanigera
ENSSARG00000012227	-	86	82.418	ENSCSAG00000001062	YARS	86	82.418	Chlorocebus_sabaeus
ENSSARG00000012227	-	63	96.262	ENSCHOG00000003939	YARS	68	96.262	Choloepus_hoffmanni
ENSSARG00000012227	-	72	90.909	ENSCPBG00000010998	YARS	76	90.909	Chrysemys_picta_bellii
ENSSARG00000012227	-	82	70.301	ENSCING00000005113	-	82	70.301	Ciona_intestinalis
ENSSARG00000012227	-	82	68.679	ENSCSAVG00000003706	-	81	68.679	Ciona_savignyi
ENSSARG00000012227	-	86	82.418	ENSCANG00000038285	YARS	86	82.418	Colobus_angolensis_palliatus
ENSSARG00000012227	-	86	83.150	ENSCGRG00001010863	Yars	80	83.150	Cricetulus_griseus_chok1gshd
ENSSARG00000012227	-	86	83.150	ENSCGRG00000007526	Yars	80	83.150	Cricetulus_griseus_crigri
ENSSARG00000012227	-	84	71.691	ENSCSEG00000009643	yars	86	71.691	Cynoglossus_semilaevis
ENSSARG00000012227	-	85	74.265	ENSCVAG00000016583	yars	86	74.265	Cyprinodon_variegatus
ENSSARG00000012227	-	86	75.458	ENSDARG00000035913	yars	100	90.805	Danio_rerio
ENSSARG00000012227	-	86	82.051	ENSDNOG00000000536	YARS	86	82.051	Dasypus_novemcinctus
ENSSARG00000012227	-	86	81.319	ENSDORG00000011871	Yars	86	81.319	Dipodomys_ordii
ENSSARG00000012227	-	79	69.925	FBgn0027080	TyrRS	81	69.925	Drosophila_melanogaster
ENSSARG00000012227	-	72	98.684	ENSETEG00000000215	YARS	73	98.684	Echinops_telfairi
ENSSARG00000012227	-	82	65.918	ENSEBUG00000004750	yars	82	65.918	Eptatretus_burgeri
ENSSARG00000012227	-	86	81.319	ENSEASG00005011762	YARS	80	81.319	Equus_asinus_asinus
ENSSARG00000012227	-	85	80.370	ENSECAG00000010015	YARS	59	80.586	Equus_caballus
ENSSARG00000012227	-	74	98.535	ENSEEUG00000005992	-	73	98.535	Erinaceus_europaeus
ENSSARG00000012227	-	85	75.277	ENSELUG00000017171	yars	85	75.277	Esox_lucius
ENSSARG00000012227	-	77	78.509	ENSFCAG00000000704	YARS	90	78.509	Felis_catus
ENSSARG00000012227	-	84	77.444	ENSFALG00000000592	YARS	80	76.923	Ficedula_albicollis
ENSSARG00000012227	-	86	80.586	ENSFDAG00000006620	YARS	80	80.586	Fukomys_damarensis
ENSSARG00000012227	-	84	74.265	ENSFHEG00000022444	yars	84	74.265	Fundulus_heteroclitus
ENSSARG00000012227	-	76	74.206	ENSGMOG00000006555	yars	84	74.206	Gadus_morhua
ENSSARG00000012227	-	86	76.557	ENSGALG00000003563	YARS	84	76.557	Gallus_gallus
ENSSARG00000012227	-	83	72.426	ENSGACG00000008516	yars	85	72.426	Gasterosteus_aculeatus
ENSSARG00000012227	-	86	76.557	ENSGAGG00000024290	YARS	86	76.557	Gopherus_agassizii
ENSSARG00000012227	-	86	83.150	ENSGGOG00000014013	YARS	86	83.150	Gorilla_gorilla
ENSSARG00000012227	-	83	71.691	ENSHBUG00000018909	yars	82	71.691	Haplochromis_burtoni
ENSSARG00000012227	-	86	80.220	ENSHGLG00000013843	YARS	80	80.220	Heterocephalus_glaber_female
ENSSARG00000012227	-	86	80.220	ENSHGLG00100002785	-	86	80.220	Heterocephalus_glaber_male
ENSSARG00000012227	-	83	73.529	ENSHCOG00000006672	yars	83	73.260	Hippocampus_comes
ENSSARG00000012227	-	85	73.260	ENSIPUG00000021749	yars	85	73.260	Ictalurus_punctatus
ENSSARG00000012227	-	85	82.418	ENSSTOG00000012031	YARS	80	82.418	Ictidomys_tridecemlineatus
ENSSARG00000012227	-	86	82.418	ENSJJAG00000013281	Yars	80	82.418	Jaculus_jaculus
ENSSARG00000012227	-	84	71.691	ENSKMAG00000021752	yars	85	71.691	Kryptolebias_marmoratus
ENSSARG00000012227	-	84	72.426	ENSLBEG00000024080	yars	84	72.426	Labrus_bergylta
ENSSARG00000012227	-	86	74.359	ENSLACG00000015577	YARS	87	74.359	Latimeria_chalumnae
ENSSARG00000012227	-	85	74.725	ENSLOCG00000002165	yars	85	74.725	Lepisosteus_oculatus
ENSSARG00000012227	-	86	82.051	ENSLAFG00000003786	YARS	82	82.051	Loxodonta_africana
ENSSARG00000012227	-	86	72.426	ENSMFAG00000040933	YARS	85	72.426	Macaca_fascicularis
ENSSARG00000012227	-	86	82.784	ENSMMUG00000019746	YARS	86	82.784	Macaca_mulatta
ENSSARG00000012227	-	70	89.474	ENSMNEG00000031865	YARS	72	89.474	Macaca_nemestrina
ENSSARG00000012227	-	86	82.784	ENSMLEG00000041315	YARS	86	82.784	Mandrillus_leucophaeus
ENSSARG00000012227	-	83	74.170	ENSMAMG00000006092	yars	84	74.170	Mastacembelus_armatus
ENSSARG00000012227	-	83	70.956	ENSMZEG00005011426	yars	84	70.956	Maylandia_zebra
ENSSARG00000012227	-	85	74.532	ENSMGAG00000005063	YARS	85	74.532	Meleagris_gallopavo
ENSSARG00000012227	-	83	81.395	ENSMAUG00000021126	Yars	85	81.395	Mesocricetus_auratus
ENSSARG00000012227	-	86	82.051	ENSMICG00000011204	YARS	86	82.051	Microcebus_murinus
ENSSARG00000012227	-	86	81.685	ENSMOCG00000011342	Yars	80	81.685	Microtus_ochrogaster
ENSSARG00000012227	-	83	73.529	ENSMMOG00000021133	yars	89	73.529	Mola_mola
ENSSARG00000012227	-	86	79.121	ENSMODG00000017404	YARS	86	79.121	Monodelphis_domestica
ENSSARG00000012227	-	86	83.150	MGP_CAROLIEiJ_G0026513	Yars	80	83.150	Mus_caroli
ENSSARG00000012227	-	86	83.150	ENSMUSG00000028811	Yars	80	83.150	Mus_musculus
ENSSARG00000012227	-	86	83.150	MGP_PahariEiJ_G0028844	Yars	80	83.150	Mus_pahari
ENSSARG00000012227	-	86	83.150	MGP_SPRETEiJ_G0027493	Yars	80	83.150	Mus_spretus
ENSSARG00000012227	-	86	82.051	ENSMLUG00000000759	YARS	86	82.051	Myotis_lucifugus
ENSSARG00000012227	-	82	79.134	ENSNGAG00000001419	Yars	85	79.134	Nannospalax_galili
ENSSARG00000012227	-	84	72.059	ENSNBRG00000020413	yars	86	72.059	Neolamprologus_brichardi
ENSSARG00000012227	-	86	83.150	ENSNLEG00000002922	YARS	86	83.150	Nomascus_leucogenys
ENSSARG00000012227	-	58	95.238	ENSMEUG00000011824	-	58	95.238	Notamacropus_eugenii
ENSSARG00000012227	-	86	71.795	ENSOPRG00000003669	YARS	86	71.795	Ochotona_princeps
ENSSARG00000012227	-	86	80.952	ENSODEG00000005363	YARS	80	80.952	Octodon_degus
ENSSARG00000012227	-	84	72.059	ENSONIG00000015400	yars	84	72.059	Oreochromis_niloticus
ENSSARG00000012227	-	78	79.853	ENSOANG00000011779	YARS	84	79.853	Ornithorhynchus_anatinus
ENSSARG00000012227	-	86	82.418	ENSOCUG00000010007	YARS	86	82.418	Oryctolagus_cuniculus
ENSSARG00000012227	-	82	74.539	ENSORLG00000013982	yars	81	74.539	Oryzias_latipes
ENSSARG00000012227	-	83	74.170	ENSORLG00020020750	yars	85	74.170	Oryzias_latipes_hni
ENSSARG00000012227	-	83	74.539	ENSORLG00015008963	yars	84	74.539	Oryzias_latipes_hsok
ENSSARG00000012227	-	85	73.897	ENSOMEG00000013016	yars	95	70.513	Oryzias_melastigma
ENSSARG00000012227	-	86	81.319	ENSOGAG00000007359	YARS	86	81.319	Otolemur_garnettii
ENSSARG00000012227	-	86	80.952	ENSOARG00000020897	YARS	80	80.952	Ovis_aries
ENSSARG00000012227	-	86	83.150	ENSPPAG00000035791	YARS	82	83.150	Pan_paniscus
ENSSARG00000012227	-	86	82.051	ENSPPRG00000023768	YARS	86	82.051	Panthera_pardus
ENSSARG00000012227	-	86	82.051	ENSPTIG00000003438	YARS	86	82.051	Panthera_tigris_altaica
ENSSARG00000012227	-	86	83.150	ENSPTRG00000000491	YARS	86	83.150	Pan_troglodytes
ENSSARG00000012227	-	86	82.784	ENSPANG00000009804	YARS	86	82.784	Papio_anubis
ENSSARG00000012227	-	86	74.359	ENSPKIG00000024596	yars	86	74.359	Paramormyrops_kingsleyae
ENSSARG00000012227	-	86	77.289	ENSPSIG00000006945	YARS	84	77.289	Pelodiscus_sinensis
ENSSARG00000012227	-	84	72.325	ENSPMGG00000022917	yars	86	72.325	Periophthalmus_magnuspinnatus
ENSSARG00000012227	-	86	82.418	ENSPEMG00000010746	Yars	80	82.418	Peromyscus_maniculatus_bairdii
ENSSARG00000012227	-	86	80.586	ENSPCIG00000022457	YARS	86	80.586	Phascolarctos_cinereus
ENSSARG00000012227	-	83	73.162	ENSPFOG00000014808	yars	83	73.162	Poecilia_formosa
ENSSARG00000012227	-	83	73.162	ENSPLAG00000020075	yars	83	73.162	Poecilia_latipinna
ENSSARG00000012227	-	83	73.162	ENSPMEG00000002803	yars	83	73.162	Poecilia_mexicana
ENSSARG00000012227	-	83	73.162	ENSPREG00000018280	yars	84	73.162	Poecilia_reticulata
ENSSARG00000012227	-	86	81.522	ENSPPYG00000001585	YARS	86	81.522	Pongo_abelii
ENSSARG00000012227	-	59	98.058	ENSPCAG00000011170	YARS	59	98.058	Procavia_capensis
ENSSARG00000012227	-	86	82.418	ENSPCOG00000021026	YARS	86	82.418	Propithecus_coquereli
ENSSARG00000012227	-	86	81.319	ENSPVAG00000010984	YARS	86	81.319	Pteropus_vampyrus
ENSSARG00000012227	-	83	71.691	ENSPNYG00000000860	yars	86	71.691	Pundamilia_nyererei
ENSSARG00000012227	-	86	73.626	ENSPNAG00000009622	yars	86	73.626	Pygocentrus_nattereri
ENSSARG00000012227	-	86	81.685	ENSRNOG00000007213	Yars	80	81.685	Rattus_norvegicus
ENSSARG00000012227	-	86	82.418	ENSRROG00000039913	YARS	86	82.418	Rhinopithecus_roxellana
ENSSARG00000012227	-	86	82.051	ENSSBOG00000030205	YARS	86	82.051	Saimiri_boliviensis_boliviensis
ENSSARG00000012227	-	86	79.487	ENSSHAG00000011851	YARS	86	79.487	Sarcophilus_harrisii
ENSSARG00000012227	-	86	75.824	ENSSFOG00015007179	yars	86	75.824	Scleropages_formosus
ENSSARG00000012227	-	85	70.956	ENSSMAG00000020736	yars	87	70.956	Scophthalmus_maximus
ENSSARG00000012227	-	83	74.265	ENSSDUG00000001782	yars	85	74.265	Seriola_dumerili
ENSSARG00000012227	-	83	74.632	ENSSLDG00000008268	yars	85	74.632	Seriola_lalandi_dorsalis
ENSSARG00000012227	-	86	75.824	ENSSPUG00000000333	YARS	86	75.824	Sphenodon_punctatus
ENSSARG00000012227	-	84	73.529	ENSSPAG00000020632	yars	80	73.529	Stegastes_partitus
ENSSARG00000012227	-	86	82.418	ENSSSCG00000030369	YARS	86	82.418	Sus_scrofa
ENSSARG00000012227	-	86	77.656	ENSTGUG00000001342	YARS	86	77.656	Taeniopygia_guttata
ENSSARG00000012227	-	84	74.436	ENSTRUG00000014099	yars	84	74.436	Takifugu_rubripes
ENSSARG00000012227	-	83	73.897	ENSTNIG00000009237	yars	87	73.897	Tetraodon_nigroviridis
ENSSARG00000012227	-	59	89.474	ENSTBEG00000014374	YARS	61	89.474	Tupaia_belangeri
ENSSARG00000012227	-	86	81.685	ENSTTRG00000014987	YARS	86	81.685	Tursiops_truncatus
ENSSARG00000012227	-	86	82.418	ENSUAMG00000000392	YARS	90	82.418	Ursus_americanus
ENSSARG00000012227	-	71	82.418	ENSUMAG00000008312	YARS	71	82.418	Ursus_maritimus
ENSSARG00000012227	-	80	94.526	ENSVPAG00000010958	YARS	80	94.526	Vicugna_pacos
ENSSARG00000012227	-	86	83.150	ENSVVUG00000015468	YARS	85	81.641	Vulpes_vulpes
ENSSARG00000012227	-	85	72.894	ENSXETG00000027865	yars	85	72.894	Xenopus_tropicalis
ENSSARG00000012227	-	80	72.794	ENSXMAG00000016348	yars	69	72.794	Xiphophorus_maculatus