EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000012639 (Gene tree)
Gene ID: -
Gene Symbol: HDLBP
Alias: HBP|VGL
Full Name: high density lipoprotein binding protein
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 14320 bases
Position: chrGeneScaffold_2084:1685-16004
Accession: 4857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000011420	KH_1	PF00013.29	5.2e-148	1	11
ENSSARP00000011420	KH_1	PF00013.29	5.2e-148	2	11
ENSSARP00000011420	KH_1	PF00013.29	5.2e-148	3	11
ENSSARP00000011420	KH_1	PF00013.29	5.2e-148	4	11
ENSSARP00000011420	KH_1	PF00013.29	5.2e-148	5	11
ENSSARP00000011420	KH_1	PF00013.29	5.2e-148	6	11
ENSSARP00000011420	KH_1	PF00013.29	5.2e-148	7	11
ENSSARP00000011420	KH_1	PF00013.29	5.2e-148	8	11
ENSSARP00000011420	KH_1	PF00013.29	5.2e-148	9	11
ENSSARP00000011420	KH_1	PF00013.29	5.2e-148	10	11
ENSSARP00000011420	KH_1	PF00013.29	5.2e-148	11	11

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000012645	HDLBP-201	3792	-	ENSSARP00000011420	1263 (aa)	-	UPI00015801A9

Gene Model

Click here to download ENSSARG00000012639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000012639's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000012639	HDLBP	100	77.997	ENSG00000115677	HDLBP	100	100.000	Homo_sapiens
ENSSARG00000012639	HDLBP	94	69.237	ENSAPOG00000012609	hdlbpa	94	69.237	Acanthochromis_polyacanthus
ENSSARG00000012639	HDLBP	100	77.734	ENSAMEG00000016552	HDLBP	100	77.734	Ailuropoda_melanoleuca
ENSSARG00000012639	HDLBP	94	71.443	ENSACIG00000006015	hdlbpa	93	71.443	Amphilophus_citrinellus
ENSSARG00000012639	HDLBP	94	69.237	ENSAOCG00000000300	hdlbpa	94	69.237	Amphiprion_ocellaris
ENSSARG00000012639	HDLBP	94	69.153	ENSAPEG00000000522	hdlbpa	99	69.153	Amphiprion_percula
ENSSARG00000012639	HDLBP	94	68.315	ENSATEG00000009748	hdlbpa	94	68.315	Anabas_testudineus
ENSSARG00000012639	HDLBP	100	71.924	ENSACAG00000001556	HDLBP	100	71.924	Anolis_carolinensis
ENSSARG00000012639	HDLBP	100	77.681	ENSANAG00000020545	HDLBP	100	77.681	Aotus_nancymaae
ENSSARG00000012639	HDLBP	94	69.321	ENSACLG00000025965	hdlbpa	94	69.321	Astatotilapia_calliptera
ENSSARG00000012639	HDLBP	93	68.957	ENSAMXG00000004221	hdlbpa	99	68.957	Astyanax_mexicanus
ENSSARG00000012639	HDLBP	100	77.681	ENSBTAG00000004315	HDLBP	100	77.681	Bos_taurus
ENSSARG00000012639	HDLBP	100	77.717	ENSCJAG00000006152	HDLBP	100	77.717	Callithrix_jacchus
ENSSARG00000012639	HDLBP	100	78.155	ENSCAFG00000012913	HDLBP	100	81.138	Canis_familiaris
ENSSARG00000012639	HDLBP	100	78.155	ENSCAFG00020025089	HDLBP	100	78.155	Canis_lupus_dingo
ENSSARG00000012639	HDLBP	100	77.524	ENSCHIG00000022364	HDLBP	100	77.524	Capra_hircus
ENSSARG00000012639	HDLBP	100	77.208	ENSTSYG00000002379	HDLBP	100	77.208	Carlito_syrichta
ENSSARG00000012639	HDLBP	96	96.000	ENSCAPG00000008584	HDLBP	98	96.000	Cavia_aperea
ENSSARG00000012639	HDLBP	100	77.866	ENSCPOG00000006297	HDLBP	100	77.866	Cavia_porcellus
ENSSARG00000012639	HDLBP	100	77.760	ENSCCAG00000023361	-	100	77.760	Cebus_capucinus
ENSSARG00000012639	HDLBP	89	74.084	ENSCCAG00000037920	-	100	74.084	Cebus_capucinus
ENSSARG00000012639	HDLBP	100	78.155	ENSCATG00000039363	HDLBP	100	78.155	Cercocebus_atys
ENSSARG00000012639	HDLBP	97	89.286	ENSCLAG00000002365	HDLBP	93	89.286	Chinchilla_lanigera
ENSSARG00000012639	HDLBP	96	96.000	ENSCSAG00000005781	HDLBP	94	96.000	Chlorocebus_sabaeus
ENSSARG00000012639	HDLBP	86	55.367	ENSCHOG00000003882	-	94	55.367	Choloepus_hoffmanni
ENSSARG00000012639	HDLBP	100	72.955	ENSCPBG00000002442	HDLBP	100	72.955	Chrysemys_picta_bellii
ENSSARG00000012639	HDLBP	100	78.155	ENSCANG00000033571	HDLBP	100	78.155	Colobus_angolensis_palliatus
ENSSARG00000012639	HDLBP	60	42.797	ENSCGRG00001010570	4921511C20Rik	100	42.797	Cricetulus_griseus_chok1gshd
ENSSARG00000012639	HDLBP	100	77.760	ENSCGRG00001006086	Hdlbp	100	77.760	Cricetulus_griseus_chok1gshd
ENSSARG00000012639	HDLBP	78	47.143	ENSCGRG00000015720	Gm382	83	46.735	Cricetulus_griseus_crigri
ENSSARG00000012639	HDLBP	100	77.760	ENSCGRG00000014444	Hdlbp	100	77.760	Cricetulus_griseus_crigri
ENSSARG00000012639	HDLBP	94	68.456	ENSCSEG00000008853	hdlbpa	94	68.456	Cynoglossus_semilaevis
ENSSARG00000012639	HDLBP	94	67.869	ENSCVAG00000017892	hdlbpa	94	67.869	Cyprinodon_variegatus
ENSSARG00000012639	HDLBP	94	68.593	ENSDARG00000009830	hdlbpa	94	68.760	Danio_rerio
ENSSARG00000012639	HDLBP	100	76.041	ENSDNOG00000006753	HDLBP	100	76.041	Dasypus_novemcinctus
ENSSARG00000012639	HDLBP	86	87.600	ENSETEG00000005416	-	72	87.600	Echinops_telfairi
ENSSARG00000012639	HDLBP	100	78.076	ENSEASG00005008249	HDLBP	100	78.076	Equus_asinus_asinus
ENSSARG00000012639	HDLBP	100	78.076	ENSECAG00000012829	HDLBP	100	78.076	Equus_caballus
ENSSARG00000012639	HDLBP	89	56.522	ENSECAG00000028723	-	88	56.522	Equus_caballus
ENSSARG00000012639	HDLBP	88	56.522	ENSECAG00000030885	-	93	56.522	Equus_caballus
ENSSARG00000012639	HDLBP	84	77.292	ENSEEUG00000014648	HDLBP	95	77.292	Erinaceus_europaeus
ENSSARG00000012639	HDLBP	94	66.667	ENSELUG00000010700	hdlbpa	94	66.667	Esox_lucius
ENSSARG00000012639	HDLBP	100	78.155	ENSFCAG00000010455	HDLBP	100	78.155	Felis_catus
ENSSARG00000012639	HDLBP	100	73.738	ENSFALG00000003437	HDLBP	100	73.896	Ficedula_albicollis
ENSSARG00000012639	HDLBP	100	77.945	ENSFDAG00000000456	HDLBP	100	77.945	Fukomys_damarensis
ENSSARG00000012639	HDLBP	94	67.728	ENSFHEG00000004848	hdlbpa	94	67.728	Fundulus_heteroclitus
ENSSARG00000012639	HDLBP	100	64.890	ENSGMOG00000009932	hdlbpa	99	64.890	Gadus_morhua
ENSSARG00000012639	HDLBP	100	74.054	ENSGALG00000005823	HDLBP	100	74.132	Gallus_gallus
ENSSARG00000012639	HDLBP	94	55.541	ENSGAFG00000016766	hdlbpa	93	55.541	Gambusia_affinis
ENSSARG00000012639	HDLBP	94	67.198	ENSGACG00000004648	hdlbpa	94	67.198	Gasterosteus_aculeatus
ENSSARG00000012639	HDLBP	100	73.738	ENSGAGG00000004256	HDLBP	100	73.738	Gopherus_agassizii
ENSSARG00000012639	HDLBP	100	77.997	ENSGGOG00000004392	HDLBP	100	77.997	Gorilla_gorilla
ENSSARG00000012639	HDLBP	94	69.321	ENSHBUG00000001136	hdlbpa	94	69.321	Haplochromis_burtoni
ENSSARG00000012639	HDLBP	100	77.312	ENSHGLG00000004910	HDLBP	100	77.312	Heterocephalus_glaber_female
ENSSARG00000012639	HDLBP	100	77.312	ENSHGLG00100013326	HDLBP	100	77.312	Heterocephalus_glaber_male
ENSSARG00000012639	HDLBP	94	68.231	ENSHCOG00000014837	hdlbpa	93	68.231	Hippocampus_comes
ENSSARG00000012639	HDLBP	94	69.405	ENSIPUG00000013088	hdlbp	93	69.405	Ictalurus_punctatus
ENSSARG00000012639	HDLBP	54	67.234	ENSIPUG00000013177	-	87	67.234	Ictalurus_punctatus
ENSSARG00000012639	HDLBP	100	78.419	ENSSTOG00000013331	HDLBP	100	78.419	Ictidomys_tridecemlineatus
ENSSARG00000012639	HDLBP	78	39.755	ENSJJAG00000013712	-	90	37.455	Jaculus_jaculus
ENSSARG00000012639	HDLBP	100	77.997	ENSJJAG00000003596	Hdlbp	100	77.997	Jaculus_jaculus
ENSSARG00000012639	HDLBP	100	65.932	ENSKMAG00000007571	hdlbpa	99	65.932	Kryptolebias_marmoratus
ENSSARG00000012639	HDLBP	94	68.087	ENSLBEG00000027461	hdlbpa	93	68.087	Labrus_bergylta
ENSSARG00000012639	HDLBP	94	72.246	ENSLACG00000003592	HDLBP	94	72.246	Latimeria_chalumnae
ENSSARG00000012639	HDLBP	94	69.463	ENSLOCG00000006278	hdlbpa	94	69.463	Lepisosteus_oculatus
ENSSARG00000012639	HDLBP	100	77.287	ENSLAFG00000014826	HDLBP	100	77.287	Loxodonta_africana
ENSSARG00000012639	HDLBP	100	78.155	ENSMFAG00000033641	HDLBP	100	78.155	Macaca_fascicularis
ENSSARG00000012639	HDLBP	96	96.000	ENSMMUG00000004730	HDLBP	94	96.000	Macaca_mulatta
ENSSARG00000012639	HDLBP	100	78.155	ENSMNEG00000024260	HDLBP	100	78.155	Macaca_nemestrina
ENSSARG00000012639	HDLBP	100	78.155	ENSMLEG00000042734	HDLBP	100	78.155	Mandrillus_leucophaeus
ENSSARG00000012639	HDLBP	94	68.734	ENSMAMG00000008611	hdlbpa	90	77.778	Mastacembelus_armatus
ENSSARG00000012639	HDLBP	94	69.321	ENSMZEG00005009513	hdlbpa	94	69.321	Maylandia_zebra
ENSSARG00000012639	HDLBP	100	71.215	ENSMGAG00000003686	HDLBP	100	76.413	Meleagris_gallopavo
ENSSARG00000012639	HDLBP	100	77.760	ENSMAUG00000017743	Hdlbp	100	77.760	Mesocricetus_auratus
ENSSARG00000012639	HDLBP	100	77.839	ENSMICG00000004569	HDLBP	100	77.839	Microcebus_murinus
ENSSARG00000012639	HDLBP	100	77.918	ENSMOCG00000006679	Hdlbp	100	77.918	Microtus_ochrogaster
ENSSARG00000012639	HDLBP	94	72.359	ENSMMOG00000006880	hdlbpa	96	72.359	Mola_mola
ENSSARG00000012639	HDLBP	94	77.314	ENSMODG00000016033	HDLBP	94	77.314	Monodelphis_domestica
ENSSARG00000012639	HDLBP	94	68.231	ENSMALG00000015095	hdlbpa	94	68.231	Monopterus_albus
ENSSARG00000012639	HDLBP	100	78.233	MGP_CAROLIEiJ_G0014456	Hdlbp	100	78.233	Mus_caroli
ENSSARG00000012639	HDLBP	60	41.525	MGP_CAROLIEiJ_G0033374	4921511C20Rik	100	41.525	Mus_caroli
ENSSARG00000012639	HDLBP	88	42.487	MGP_CAROLIEiJ_G0033373	Gm382	89	42.077	Mus_caroli
ENSSARG00000012639	HDLBP	100	78.155	ENSMUSG00000034088	Hdlbp	100	78.155	Mus_musculus
ENSSARG00000012639	HDLBP	88	41.771	ENSMUSG00000062791	Gm382	89	41.182	Mus_musculus
ENSSARG00000012639	HDLBP	60	41.102	ENSMUSG00000049815	4921511C20Rik	100	41.102	Mus_musculus
ENSSARG00000012639	HDLBP	60	41.102	MGP_PahariEiJ_G0031914	4921511C20Rik	100	41.102	Mus_pahari
ENSSARG00000012639	HDLBP	100	78.233	MGP_PahariEiJ_G0027692	Hdlbp	100	78.233	Mus_pahari
ENSSARG00000012639	HDLBP	84	44.207	MGP_PahariEiJ_G0031913	Gm382	84	44.207	Mus_pahari
ENSSARG00000012639	HDLBP	100	78.233	MGP_SPRETEiJ_G0015260	Hdlbp	100	78.233	Mus_spretus
ENSSARG00000012639	HDLBP	60	40.678	MGP_SPRETEiJ_G0034539	4921511C20Rik	100	40.678	Mus_spretus
ENSSARG00000012639	HDLBP	88	40.824	MGP_SPRETEiJ_G0034538	Gm382	89	40.824	Mus_spretus
ENSSARG00000012639	HDLBP	100	78.076	ENSMPUG00000000163	HDLBP	100	78.076	Mustela_putorius_furo
ENSSARG00000012639	HDLBP	100	78.024	ENSMLUG00000005628	HDLBP	100	78.024	Myotis_lucifugus
ENSSARG00000012639	HDLBP	100	77.839	ENSNGAG00000014873	Hdlbp	100	77.839	Nannospalax_galili
ENSSARG00000012639	HDLBP	94	69.237	ENSNBRG00000000051	hdlbpa	95	69.237	Neolamprologus_brichardi
ENSSARG00000012639	HDLBP	100	77.918	ENSNLEG00000013818	HDLBP	100	77.918	Nomascus_leucogenys
ENSSARG00000012639	HDLBP	92	70.043	ENSNLEG00000031018	-	98	69.612	Nomascus_leucogenys
ENSSARG00000012639	HDLBP	96	92.491	ENSMEUG00000008427	HDLBP	88	92.491	Notamacropus_eugenii
ENSSARG00000012639	HDLBP	100	81.388	ENSOPRG00000011965	-	100	81.388	Ochotona_princeps
ENSSARG00000012639	HDLBP	100	72.885	ENSODEG00000017391	-	100	72.885	Octodon_degus
ENSSARG00000012639	HDLBP	100	77.233	ENSODEG00000012313	-	100	77.233	Octodon_degus
ENSSARG00000012639	HDLBP	94	69.070	ENSONIG00000019272	hdlbpa	94	69.070	Oreochromis_niloticus
ENSSARG00000012639	HDLBP	100	75.197	ENSOANG00000011759	-	100	75.197	Ornithorhynchus_anatinus
ENSSARG00000012639	HDLBP	100	78.155	ENSOCUG00000012667	HDLBP	100	78.155	Oryctolagus_cuniculus
ENSSARG00000012639	HDLBP	88	70.904	ENSORLG00000002226	hdlbpa	87	70.904	Oryzias_latipes
ENSSARG00000012639	HDLBP	88	70.904	ENSORLG00020007905	hdlbpa	87	70.904	Oryzias_latipes_hni
ENSSARG00000012639	HDLBP	88	71.083	ENSORLG00015004126	hdlbpa	87	71.083	Oryzias_latipes_hsok
ENSSARG00000012639	HDLBP	94	65.748	ENSOMEG00000000247	hdlbpa	93	65.748	Oryzias_melastigma
ENSSARG00000012639	HDLBP	100	77.524	ENSOGAG00000000738	HDLBP	100	77.524	Otolemur_garnettii
ENSSARG00000012639	HDLBP	100	75.529	ENSOARG00000017870	HDLBP	100	75.529	Ovis_aries
ENSSARG00000012639	HDLBP	100	77.839	ENSPPAG00000023318	HDLBP	100	77.839	Pan_paniscus
ENSSARG00000012639	HDLBP	100	78.076	ENSPPRG00000010215	HDLBP	100	78.076	Panthera_pardus
ENSSARG00000012639	HDLBP	100	62.560	ENSPTIG00000009328	HDLBP	97	70.025	Panthera_tigris_altaica
ENSSARG00000012639	HDLBP	100	77.997	ENSPTRG00000013121	HDLBP	100	77.997	Pan_troglodytes
ENSSARG00000012639	HDLBP	100	78.076	ENSPANG00000011832	HDLBP	100	78.076	Papio_anubis
ENSSARG00000012639	HDLBP	94	68.850	ENSPKIG00000002392	hdlbpa	94	68.850	Paramormyrops_kingsleyae
ENSSARG00000012639	HDLBP	94	75.000	ENSPSIG00000010068	HDLBP	100	75.000	Pelodiscus_sinensis
ENSSARG00000012639	HDLBP	94	64.030	ENSPMGG00000002102	hdlbpa	94	64.030	Periophthalmus_magnuspinnatus
ENSSARG00000012639	HDLBP	100	77.997	ENSPEMG00000017704	Hdlbp	100	77.997	Peromyscus_maniculatus_bairdii
ENSSARG00000012639	HDLBP	99	74.960	ENSPCIG00000015375	HDLBP	94	74.960	Phascolarctos_cinereus
ENSSARG00000012639	HDLBP	89	86.111	ENSPFOG00000000236	hdlbpa	94	86.111	Poecilia_formosa
ENSSARG00000012639	HDLBP	88	70.930	ENSPLAG00000006033	hdlbpa	93	70.930	Poecilia_latipinna
ENSSARG00000012639	HDLBP	94	68.064	ENSPMEG00000006627	hdlbpa	94	68.064	Poecilia_mexicana
ENSSARG00000012639	HDLBP	94	50.725	ENSPREG00000014450	hdlbpa	94	50.725	Poecilia_reticulata
ENSSARG00000012639	HDLBP	100	77.839	ENSPPYG00000013351	HDLBP	100	77.839	Pongo_abelii
ENSSARG00000012639	HDLBP	100	83.486	ENSPCAG00000011136	HDLBP	79	83.486	Procavia_capensis
ENSSARG00000012639	HDLBP	100	75.655	ENSPCOG00000021622	HDLBP	100	75.655	Propithecus_coquereli
ENSSARG00000012639	HDLBP	100	77.391	ENSPVAG00000000555	HDLBP	100	77.391	Pteropus_vampyrus
ENSSARG00000012639	HDLBP	94	69.405	ENSPNYG00000020753	hdlbpa	94	69.405	Pundamilia_nyererei
ENSSARG00000012639	HDLBP	94	66.191	ENSPNAG00000029610	hdlbpa	94	66.191	Pygocentrus_nattereri
ENSSARG00000012639	HDLBP	60	40.701	ENSRNOG00000042823	RGD1561230	97	40.701	Rattus_norvegicus
ENSSARG00000012639	HDLBP	88	43.420	ENSRNOG00000031294	RGD1563104	89	43.420	Rattus_norvegicus
ENSSARG00000012639	HDLBP	60	40.455	ENSRNOG00000028847	AABR07040251.1	100	40.455	Rattus_norvegicus
ENSSARG00000012639	HDLBP	100	77.918	ENSRNOG00000031479	Hdlbp	100	77.918	Rattus_norvegicus
ENSSARG00000012639	HDLBP	100	78.155	ENSRBIG00000041381	HDLBP	100	78.155	Rhinopithecus_bieti
ENSSARG00000012639	HDLBP	100	78.155	ENSRROG00000034263	HDLBP	100	78.155	Rhinopithecus_roxellana
ENSSARG00000012639	HDLBP	99	77.506	ENSSBOG00000029714	-	97	77.506	Saimiri_boliviensis_boliviensis
ENSSARG00000012639	HDLBP	91	69.010	ENSSBOG00000033067	-	96	69.010	Saimiri_boliviensis_boliviensis
ENSSARG00000012639	HDLBP	100	75.394	ENSSHAG00000012422	HDLBP	100	75.394	Sarcophilus_harrisii
ENSSARG00000012639	HDLBP	100	66.352	ENSSFOG00015018627	hdlbp	99	66.352	Scleropages_formosus
ENSSARG00000012639	HDLBP	94	69.321	ENSSMAG00000002382	hdlbpa	93	69.321	Scophthalmus_maximus
ENSSARG00000012639	HDLBP	94	68.619	ENSSDUG00000022258	hdlbpa	94	68.619	Seriola_dumerili
ENSSARG00000012639	HDLBP	94	68.536	ENSSLDG00000004437	hdlbpa	94	68.536	Seriola_lalandi_dorsalis
ENSSARG00000012639	HDLBP	96	88.889	ENSSPUG00000009182	HDLBP	96	88.889	Sphenodon_punctatus
ENSSARG00000012639	HDLBP	94	68.567	ENSSPAG00000009145	hdlbpa	93	68.567	Stegastes_partitus
ENSSARG00000012639	HDLBP	100	77.603	ENSSSCG00000016379	HDLBP	100	80.544	Sus_scrofa
ENSSARG00000012639	HDLBP	88	79.213	ENSTGUG00000006189	HDLBP	93	79.516	Taeniopygia_guttata
ENSSARG00000012639	HDLBP	94	67.199	ENSTRUG00000012148	hdlbpa	94	67.199	Takifugu_rubripes
ENSSARG00000012639	HDLBP	93	67.602	ENSTNIG00000004185	hdlbpa	94	67.602	Tetraodon_nigroviridis
ENSSARG00000012639	HDLBP	90	97.333	ENSTBEG00000001860	HDLBP	92	97.333	Tupaia_belangeri
ENSSARG00000012639	HDLBP	100	77.136	ENSTTRG00000015251	HDLBP	77	77.136	Tursiops_truncatus
ENSSARG00000012639	HDLBP	100	78.233	ENSUAMG00000018383	HDLBP	99	79.709	Ursus_americanus
ENSSARG00000012639	HDLBP	100	78.233	ENSUMAG00000010539	HDLBP	100	78.233	Ursus_maritimus
ENSSARG00000012639	HDLBP	83	56.923	ENSVPAG00000003112	HDLBP	84	56.923	Vicugna_pacos
ENSSARG00000012639	HDLBP	94	80.702	ENSVVUG00000022797	HDLBP	99	80.155	Vulpes_vulpes
ENSSARG00000012639	HDLBP	94	71.453	ENSXETG00000012164	hdlbp	93	71.453	Xenopus_tropicalis
ENSSARG00000012639	HDLBP	94	68.037	ENSXCOG00000005943	hdlbpa	94	68.037	Xiphophorus_couchianus
ENSSARG00000012639	HDLBP	94	68.148	ENSXMAG00000003787	hdlbpa	93	68.148	Xiphophorus_maculatus