EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000012642 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 17616 bases
Position: chrGeneScaffold_379:2801-20416
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000011418	zf-CCCH	PF00642.24	3.3e-05	1	1
ENSSARP00000011418	PARP	PF00644.20	9.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000012643	-	1647	-	ENSSARP00000011418	548 (aa)	-	UPI00015804D9

Gene Model

Click here to download ENSSARG00000012642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000012642's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000012642	-	80	66.136	ENSG00000059378	PARP12	84	82.812	Homo_sapiens
ENSSARG00000012642	-	80	37.185	ENSAPOG00000023485	parp12a	66	37.395	Acanthochromis_polyacanthus
ENSSARG00000012642	-	80	70.522	ENSAMEG00000017865	PARP12	67	70.522	Ailuropoda_melanoleuca
ENSSARG00000012642	-	80	32.063	ENSACIG00000007478	PARP12	60	32.063	Amphilophus_citrinellus
ENSSARG00000012642	-	80	30.493	ENSACIG00000007539	-	63	30.493	Amphilophus_citrinellus
ENSSARG00000012642	-	80	40.889	ENSACIG00000009637	parp12a	64	40.889	Amphilophus_citrinellus
ENSSARG00000012642	-	80	34.842	ENSACIG00000007569	-	63	33.987	Amphilophus_citrinellus
ENSSARG00000012642	-	56	35.738	ENSACIG00000007422	-	50	35.738	Amphilophus_citrinellus
ENSSARG00000012642	-	80	37.815	ENSAOCG00000000472	parp12a	66	37.815	Amphiprion_ocellaris
ENSSARG00000012642	-	80	38.025	ENSAPEG00000002783	parp12a	66	38.025	Amphiprion_percula
ENSSARG00000012642	-	80	42.377	ENSATEG00000017986	parp12a	64	42.377	Anabas_testudineus
ENSSARG00000012642	-	80	50.909	ENSAPLG00000006979	PARP12	76	50.909	Anas_platyrhynchos
ENSSARG00000012642	-	80	49.206	ENSACAG00000016815	PARP12	64	49.206	Anolis_carolinensis
ENSSARG00000012642	-	80	65.753	ENSANAG00000027023	PARP12	62	65.753	Aotus_nancymaae
ENSSARG00000012642	-	69	52.000	ENSACLG00000005503	parp12a	66	39.375	Astatotilapia_calliptera
ENSSARG00000012642	-	80	36.674	ENSAMXG00000000821	-	50	36.674	Astyanax_mexicanus
ENSSARG00000012642	-	80	40.179	ENSAMXG00000043787	parp12a	64	40.179	Astyanax_mexicanus
ENSSARG00000012642	-	80	36.923	ENSAMXG00000018396	si:ch73-252i11.1	58	36.923	Astyanax_mexicanus
ENSSARG00000012642	-	80	38.149	ENSAMXG00000001021	parp12a	65	38.149	Astyanax_mexicanus
ENSSARG00000012642	-	100	54.727	ENSBTAG00000016546	PARP12	78	54.727	Bos_taurus
ENSSARG00000012642	-	80	65.455	ENSCJAG00000013351	PARP12	62	65.455	Callithrix_jacchus
ENSSARG00000012642	-	80	71.429	ENSCAFG00000003997	PARP12	63	71.429	Canis_familiaris
ENSSARG00000012642	-	80	71.429	ENSCAFG00020022200	PARP12	63	71.429	Canis_lupus_dingo
ENSSARG00000012642	-	100	54.545	ENSCHIG00000014673	PARP12	78	54.545	Capra_hircus
ENSSARG00000012642	-	80	65.376	ENSTSYG00000004008	PARP12	71	65.376	Carlito_syrichta
ENSSARG00000012642	-	80	65.011	ENSCAPG00000009108	PARP12	72	65.011	Cavia_aperea
ENSSARG00000012642	-	80	69.388	ENSCPOG00000011210	PARP12	73	69.388	Cavia_porcellus
ENSSARG00000012642	-	80	66.059	ENSCCAG00000032426	PARP12	62	66.059	Cebus_capucinus
ENSSARG00000012642	-	80	66.818	ENSCATG00000029372	PARP12	63	66.818	Cercocebus_atys
ENSSARG00000012642	-	80	69.318	ENSCLAG00000002012	PARP12	68	69.388	Chinchilla_lanigera
ENSSARG00000012642	-	80	66.364	ENSCSAG00000008282	PARP12	63	66.364	Chlorocebus_sabaeus
ENSSARG00000012642	-	80	50.000	ENSCPBG00000013389	PARP12	62	50.000	Chrysemys_picta_bellii
ENSSARG00000012642	-	80	66.364	ENSCANG00000034582	PARP12	72	66.364	Colobus_angolensis_palliatus
ENSSARG00000012642	-	80	66.063	ENSCGRG00001010916	Parp12	62	66.063	Cricetulus_griseus_chok1gshd
ENSSARG00000012642	-	80	66.063	ENSCGRG00000015998	Parp12	72	66.063	Cricetulus_griseus_crigri
ENSSARG00000012642	-	80	39.827	ENSCSEG00000009223	parp12a	66	39.827	Cynoglossus_semilaevis
ENSSARG00000012642	-	80	40.546	ENSCVAG00000016405	parp12a	66	39.916	Cyprinodon_variegatus
ENSSARG00000012642	-	80	41.845	ENSCVAG00000016385	parp12a	73	44.643	Cyprinodon_variegatus
ENSSARG00000012642	-	80	39.159	ENSDARG00000042496	parp12a	65	39.159	Danio_rerio
ENSSARG00000012642	-	55	42.763	ENSDARG00000100660	si:ch73-252i11.1	55	42.763	Danio_rerio
ENSSARG00000012642	-	51	72.043	ENSDNOG00000009685	-	72	72.043	Dasypus_novemcinctus
ENSSARG00000012642	-	80	65.455	ENSDORG00000009525	Parp12	69	65.315	Dipodomys_ordii
ENSSARG00000012642	-	71	62.016	ENSETEG00000013423	-	100	62.016	Echinops_telfairi
ENSSARG00000012642	-	76	30.070	ENSEBUG00000000742	-	57	30.070	Eptatretus_burgeri
ENSSARG00000012642	-	58	45.946	ENSEBUG00000016305	-	55	45.946	Eptatretus_burgeri
ENSSARG00000012642	-	99	59.783	ENSECAG00000022601	PARP12	52	70.295	Equus_caballus
ENSSARG00000012642	-	80	57.763	ENSEEUG00000002654	PARP12	74	57.763	Erinaceus_europaeus
ENSSARG00000012642	-	80	40.652	ENSELUG00000019421	parp12a	65	40.652	Esox_lucius
ENSSARG00000012642	-	80	35.319	ENSELUG00000004066	si:ch73-252i11.1	59	35.319	Esox_lucius
ENSSARG00000012642	-	80	36.242	ENSELUG00000002966	-	51	35.938	Esox_lucius
ENSSARG00000012642	-	80	50.797	ENSFALG00000009061	PARP12	69	50.797	Ficedula_albicollis
ENSSARG00000012642	-	80	67.568	ENSFDAG00000021493	PARP12	69	67.568	Fukomys_damarensis
ENSSARG00000012642	-	80	46.939	ENSFHEG00000011844	parp12a	73	46.939	Fundulus_heteroclitus
ENSSARG00000012642	-	80	39.212	ENSFHEG00000011833	parp12a	73	41.176	Fundulus_heteroclitus
ENSSARG00000012642	-	80	35.808	ENSGMOG00000009778	-	62	35.808	Gadus_morhua
ENSSARG00000012642	-	55	42.020	ENSGMOG00000001046	-	78	40.446	Gadus_morhua
ENSSARG00000012642	-	56	41.587	ENSGMOG00000016384	-	74	41.587	Gadus_morhua
ENSSARG00000012642	-	56	35.831	ENSGMOG00000004950	-	77	35.831	Gadus_morhua
ENSSARG00000012642	-	80	34.014	ENSGMOG00000010741	-	74	34.014	Gadus_morhua
ENSSARG00000012642	-	76	50.238	ENSGALG00000046187	PARP12	82	50.238	Gallus_gallus
ENSSARG00000012642	-	80	42.857	ENSGAFG00000021877	parp12a	73	42.857	Gambusia_affinis
ENSSARG00000012642	-	80	43.142	ENSGAFG00000021878	parp12a	73	39.744	Gambusia_affinis
ENSSARG00000012642	-	80	34.573	ENSGACG00000019123	si:ch73-252i11.1	56	34.573	Gasterosteus_aculeatus
ENSSARG00000012642	-	80	41.611	ENSGACG00000013321	parp12a	64	41.611	Gasterosteus_aculeatus
ENSSARG00000012642	-	80	51.142	ENSGAGG00000001030	PARP12	62	51.142	Gopherus_agassizii
ENSSARG00000012642	-	80	66.136	ENSGGOG00000000828	PARP12	64	66.136	Gorilla_gorilla
ENSSARG00000012642	-	69	53.333	ENSHBUG00000017751	parp12a	66	39.375	Haplochromis_burtoni
ENSSARG00000012642	-	80	68.481	ENSHGLG00000018555	PARP12	61	68.481	Heterocephalus_glaber_female
ENSSARG00000012642	-	80	68.481	ENSHGLG00100013923	PARP12	68	68.481	Heterocephalus_glaber_male
ENSSARG00000012642	-	80	36.853	ENSHCOG00000007607	parp12a	62	36.695	Hippocampus_comes
ENSSARG00000012642	-	80	39.456	ENSIPUG00000014496	-	63	39.456	Ictalurus_punctatus
ENSSARG00000012642	-	80	33.183	ENSIPUG00000005344	-	61	30.524	Ictalurus_punctatus
ENSSARG00000012642	-	80	38.584	ENSIPUG00000014600	parp12a	64	38.584	Ictalurus_punctatus
ENSSARG00000012642	-	80	37.923	ENSIPUG00000014525	parp12a	65	37.923	Ictalurus_punctatus
ENSSARG00000012642	-	80	67.568	ENSSTOG00000004578	PARP12	71	67.568	Ictidomys_tridecemlineatus
ENSSARG00000012642	-	80	67.045	ENSJJAG00000019161	Parp12	69	67.273	Jaculus_jaculus
ENSSARG00000012642	-	80	44.643	ENSKMAG00000022046	parp12a	73	44.643	Kryptolebias_marmoratus
ENSSARG00000012642	-	80	40.177	ENSLBEG00000009082	parp12a	64	39.956	Labrus_bergylta
ENSSARG00000012642	-	54	42.667	ENSLBEG00000009125	parp12a	63	42.667	Labrus_bergylta
ENSSARG00000012642	-	95	41.477	ENSLACG00000018265	PARP12	71	41.477	Latimeria_chalumnae
ENSSARG00000012642	-	80	40.225	ENSLOCG00000016964	parp12a	64	40.225	Lepisosteus_oculatus
ENSSARG00000012642	-	80	42.141	ENSLOCG00000016455	-	64	41.834	Lepisosteus_oculatus
ENSSARG00000012642	-	80	39.640	ENSLOCG00000016450	si:ch73-252i11.1	54	39.640	Lepisosteus_oculatus
ENSSARG00000012642	-	80	65.753	ENSLAFG00000005717	PARP12	76	65.753	Loxodonta_africana
ENSSARG00000012642	-	80	66.591	ENSMFAG00000034646	PARP12	63	66.591	Macaca_fascicularis
ENSSARG00000012642	-	80	65.909	ENSMMUG00000004224	PARP12	62	65.909	Macaca_mulatta
ENSSARG00000012642	-	80	66.591	ENSMNEG00000028999	PARP12	63	66.591	Macaca_nemestrina
ENSSARG00000012642	-	80	66.591	ENSMLEG00000036058	PARP12	71	66.591	Mandrillus_leucophaeus
ENSSARG00000012642	-	80	40.043	ENSMAMG00000001755	parp12a	66	39.829	Mastacembelus_armatus
ENSSARG00000012642	-	69	53.333	ENSMZEG00005017042	parp12a	66	39.792	Maylandia_zebra
ENSSARG00000012642	-	69	42.623	ENSMZEG00005018239	-	50	42.623	Maylandia_zebra
ENSSARG00000012642	-	80	51.584	ENSMGAG00000013110	PARP12	76	51.584	Meleagris_gallopavo
ENSSARG00000012642	-	80	67.640	ENSMICG00000003163	PARP12	63	67.865	Microcebus_murinus
ENSSARG00000012642	-	80	64.545	ENSMOCG00000002228	Parp12	63	64.545	Microtus_ochrogaster
ENSSARG00000012642	-	80	38.667	ENSMMOG00000019226	parp12a	65	38.667	Mola_mola
ENSSARG00000012642	-	80	52.727	ENSMODG00000013713	PARP12	56	52.727	Monodelphis_domestica
ENSSARG00000012642	-	80	38.723	ENSMALG00000022003	parp12a	66	38.936	Monopterus_albus
ENSSARG00000012642	-	80	34.146	ENSMALG00000003217	-	56	34.146	Monopterus_albus
ENSSARG00000012642	-	80	65.611	MGP_CAROLIEiJ_G0028242	Parp12	62	65.611	Mus_caroli
ENSSARG00000012642	-	80	65.158	ENSMUSG00000038507	Parp12	62	65.158	Mus_musculus
ENSSARG00000012642	-	80	65.227	MGP_PahariEiJ_G0022000	Parp12	62	65.837	Mus_pahari
ENSSARG00000012642	-	80	65.385	MGP_SPRETEiJ_G0029241	Parp12	62	65.385	Mus_spretus
ENSSARG00000012642	-	100	59.347	ENSMPUG00000003682	PARP12	92	59.347	Mustela_putorius_furo
ENSSARG00000012642	-	80	66.438	ENSMLUG00000004185	PARP12	73	66.438	Myotis_lucifugus
ENSSARG00000012642	-	80	67.198	ENSNGAG00000015925	Parp12	62	67.198	Nannospalax_galili
ENSSARG00000012642	-	80	32.898	ENSNBRG00000020115	si:ch73-252i11.1	58	32.898	Neolamprologus_brichardi
ENSSARG00000012642	-	80	66.059	ENSNLEG00000001802	-	59	66.059	Nomascus_leucogenys
ENSSARG00000012642	-	80	65.986	ENSODEG00000013738	PARP12	68	65.986	Octodon_degus
ENSSARG00000012642	-	70	40.984	ENSONIG00000009963	si:ch73-252i11.1	58	41.967	Oreochromis_niloticus
ENSSARG00000012642	-	80	42.222	ENSONIG00000010409	parp12a	64	42.257	Oreochromis_niloticus
ENSSARG00000012642	-	51	55.914	ENSOANG00000008460	-	93	55.914	Ornithorhynchus_anatinus
ENSSARG00000012642	-	80	64.545	ENSOCUG00000003213	PARP12	73	64.545	Oryctolagus_cuniculus
ENSSARG00000012642	-	80	46.939	ENSORLG00000016148	parp12a	72	46.939	Oryzias_latipes
ENSSARG00000012642	-	80	46.939	ENSORLG00020010032	parp12a	72	46.939	Oryzias_latipes_hni
ENSSARG00000012642	-	72	47.727	ENSORLG00015001179	parp12a	75	46.939	Oryzias_latipes_hsok
ENSSARG00000012642	-	56	40.328	ENSORLG00015002400	si:ch73-252i11.1	54	40.328	Oryzias_latipes_hsok
ENSSARG00000012642	-	80	44.898	ENSOMEG00000022731	parp12a	72	44.898	Oryzias_melastigma
ENSSARG00000012642	-	80	68.254	ENSOGAG00000008906	PARP12	63	68.254	Otolemur_garnettii
ENSSARG00000012642	-	100	54.909	ENSOARG00000012408	PARP12	78	54.909	Ovis_aries
ENSSARG00000012642	-	80	65.909	ENSPPAG00000029869	PARP12	68	65.909	Pan_paniscus
ENSSARG00000012642	-	100	59.165	ENSPPRG00000024763	PARP12	78	59.165	Panthera_pardus
ENSSARG00000012642	-	100	58.727	ENSPTIG00000018638	PARP12	88	58.727	Panthera_tigris_altaica
ENSSARG00000012642	-	80	65.909	ENSPTRG00000019761	PARP12	63	65.909	Pan_troglodytes
ENSSARG00000012642	-	80	66.818	ENSPANG00000022225	PARP12	63	66.818	Papio_anubis
ENSSARG00000012642	-	80	50.459	ENSPSIG00000015130	PARP12	80	50.459	Pelodiscus_sinensis
ENSSARG00000012642	-	80	40.000	ENSPMGG00000006266	-	64	40.000	Periophthalmus_magnuspinnatus
ENSSARG00000012642	-	80	35.294	ENSPMGG00000020753	si:ch73-252i11.1	63	32.965	Periophthalmus_magnuspinnatus
ENSSARG00000012642	-	100	55.676	ENSPEMG00000023375	Parp12	77	55.676	Peromyscus_maniculatus_bairdii
ENSSARG00000012642	-	57	30.556	ENSPMAG00000000482	-	82	30.556	Petromyzon_marinus
ENSSARG00000012642	-	80	40.406	ENSPCIG00000021651	-	63	40.406	Phascolarctos_cinereus
ENSSARG00000012642	-	80	52.055	ENSPCIG00000016386	PARP12	63	52.055	Phascolarctos_cinereus
ENSSARG00000012642	-	80	35.560	ENSPFOG00000009053	-	79	35.560	Poecilia_formosa
ENSSARG00000012642	-	80	41.632	ENSPLAG00000006271	-	66	41.632	Poecilia_latipinna
ENSSARG00000012642	-	80	40.748	ENSPLAG00000006241	parp12a	73	42.857	Poecilia_latipinna
ENSSARG00000012642	-	80	34.956	ENSPMEG00000016654	si:ch73-252i11.1	57	34.956	Poecilia_mexicana
ENSSARG00000012642	-	80	41.841	ENSPMEG00000014115	parp12a	66	41.841	Poecilia_mexicana
ENSSARG00000012642	-	80	40.748	ENSPMEG00000014083	parp12a	73	44.898	Poecilia_mexicana
ENSSARG00000012642	-	80	42.050	ENSPREG00000000674	parp12a	66	42.050	Poecilia_reticulata
ENSSARG00000012642	-	80	38.492	ENSPREG00000000666	parp12a	73	44.898	Poecilia_reticulata
ENSSARG00000012642	-	80	52.584	ENSPCOG00000016258	PARP12	59	52.584	Propithecus_coquereli
ENSSARG00000012642	-	80	67.123	ENSPVAG00000003159	PARP12	72	67.123	Pteropus_vampyrus
ENSSARG00000012642	-	69	53.333	ENSPNYG00000021033	parp12a	66	39.583	Pundamilia_nyererei
ENSSARG00000012642	-	80	40.090	ENSPNAG00000021181	parp12a	71	51.220	Pygocentrus_nattereri
ENSSARG00000012642	-	80	38.117	ENSPNAG00000021230	parp12a	59	38.117	Pygocentrus_nattereri
ENSSARG00000012642	-	80	34.475	ENSPNAG00000007794	PARP12	59	34.475	Pygocentrus_nattereri
ENSSARG00000012642	-	80	64.865	ENSRNOG00000008196	Parp12	62	64.865	Rattus_norvegicus
ENSSARG00000012642	-	80	66.136	ENSRBIG00000039432	PARP12	73	66.136	Rhinopithecus_bieti
ENSSARG00000012642	-	80	66.364	ENSRROG00000036363	PARP12	63	66.364	Rhinopithecus_roxellana
ENSSARG00000012642	-	80	66.287	ENSSBOG00000035883	PARP12	73	66.287	Saimiri_boliviensis_boliviensis
ENSSARG00000012642	-	80	39.159	ENSSHAG00000005831	-	74	39.159	Sarcophilus_harrisii
ENSSARG00000012642	-	56	56.066	ENSSHAG00000014045	-	53	56.066	Sarcophilus_harrisii
ENSSARG00000012642	-	80	51.220	ENSSFOG00015003427	parp12a	80	51.220	Scleropages_formosus
ENSSARG00000012642	-	80	37.415	ENSSFOG00015010647	-	60	37.415	Scleropages_formosus
ENSSARG00000012642	-	80	37.104	ENSSFOG00015010708	-	61	37.104	Scleropages_formosus
ENSSARG00000012642	-	80	44.898	ENSSMAG00000010702	parp12a	72	44.898	Scophthalmus_maximus
ENSSARG00000012642	-	80	37.810	ENSSDUG00000000297	parp12a	73	46.939	Seriola_dumerili
ENSSARG00000012642	-	69	41.694	ENSSDUG00000014148	si:ch73-252i11.1	57	34.725	Seriola_dumerili
ENSSARG00000012642	-	80	47.917	ENSSLDG00000009897	parp12a	73	46.939	Seriola_lalandi_dorsalis
ENSSARG00000012642	-	80	35.682	ENSSLDG00000013415	si:ch73-252i11.1	58	35.909	Seriola_lalandi_dorsalis
ENSSARG00000012642	-	80	54.318	ENSSPUG00000007335	PARP12	79	54.110	Sphenodon_punctatus
ENSSARG00000012642	-	80	39.535	ENSSPAG00000020097	parp12a	66	39.535	Stegastes_partitus
ENSSARG00000012642	-	100	55.254	ENSSSCG00000016502	PARP12	78	55.254	Sus_scrofa
ENSSARG00000012642	-	80	51.591	ENSTGUG00000011354	PARP12	66	51.591	Taeniopygia_guttata
ENSSARG00000012642	-	80	36.559	ENSTRUG00000007328	parp12a	66	37.204	Takifugu_rubripes
ENSSARG00000012642	-	80	33.183	ENSTNIG00000006913	si:ch73-252i11.1	73	34.086	Tetraodon_nigroviridis
ENSSARG00000012642	-	80	44.643	ENSTNIG00000008377	parp12a	81	44.643	Tetraodon_nigroviridis
ENSSARG00000012642	-	68	67.870	ENSTTRG00000015180	PARP12	54	67.870	Tursiops_truncatus
ENSSARG00000012642	-	80	70.522	ENSUAMG00000013122	PARP12	67	70.522	Ursus_americanus
ENSSARG00000012642	-	80	70.522	ENSUMAG00000015082	PARP12	70	70.522	Ursus_maritimus
ENSSARG00000012642	-	80	71.202	ENSVVUG00000001841	PARP12	73	71.202	Vulpes_vulpes
ENSSARG00000012642	-	80	46.292	ENSXETG00000008923	-	64	46.292	Xenopus_tropicalis
ENSSARG00000012642	-	80	46.939	ENSXCOG00000009933	parp12a	73	46.939	Xiphophorus_couchianus
ENSSARG00000012642	-	80	42.035	ENSXCOG00000009904	-	65	41.266	Xiphophorus_couchianus
ENSSARG00000012642	-	78	34.272	ENSXCOG00000003517	-	60	34.272	Xiphophorus_couchianus
ENSSARG00000012642	-	79	33.864	ENSXCOG00000003512	-	68	33.864	Xiphophorus_couchianus
ENSSARG00000012642	-	80	46.939	ENSXMAG00000021188	parp12a	73	46.939	Xiphophorus_maculatus
ENSSARG00000012642	-	80	39.832	ENSXMAG00000002950	-	66	39.832	Xiphophorus_maculatus