EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000012981 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 22631 bases
Position: chrGeneScaffold_290:11358-33988
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000011722	MMR_HSR1	PF01926.23	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000012980	LSG1-201	1977	-	ENSSARP00000011722	658 (aa)	-	UPI0001581569

Gene Model

Click here to download ENSSARG00000012981's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000012981's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000012981	LSG1	81	83.529	ENSG00000041802	LSG1	81	83.529	Homo_sapiens
ENSSARG00000012981	LSG1	74	71.572	ENSAPOG00000009694	lsg1	86	65.318	Acanthochromis_polyacanthus
ENSSARG00000012981	LSG1	81	81.924	ENSAMEG00000009343	LSG1	81	81.924	Ailuropoda_melanoleuca
ENSSARG00000012981	LSG1	82	64.146	ENSACIG00000012406	lsg1	84	66.568	Amphilophus_citrinellus
ENSSARG00000012981	LSG1	74	71.906	ENSAOCG00000016066	lsg1	85	65.487	Amphiprion_ocellaris
ENSSARG00000012981	LSG1	76	70.455	ENSAPEG00000003252	lsg1	87	65.179	Amphiprion_percula
ENSSARG00000012981	LSG1	80	64.986	ENSATEG00000011794	lsg1	82	68.389	Anabas_testudineus
ENSSARG00000012981	LSG1	72	75.652	ENSACAG00000004222	LSG1	74	75.652	Anolis_carolinensis
ENSSARG00000012981	LSG1	81	84.118	ENSANAG00000021153	LSG1	81	84.118	Aotus_nancymaae
ENSSARG00000012981	LSG1	84	62.534	ENSACLG00000000520	lsg1	81	66.272	Astatotilapia_calliptera
ENSSARG00000012981	LSG1	82	63.897	ENSAMXG00000008271	lsg1	84	64.756	Astyanax_mexicanus
ENSSARG00000012981	LSG1	81	82.405	ENSBTAG00000008461	LSG1	82	82.405	Bos_taurus
ENSSARG00000012981	LSG1	52	46.667	WBGene00016907	C53H9.2	60	55.224	Caenorhabditis_elegans
ENSSARG00000012981	LSG1	81	84.412	ENSCJAG00000013962	LSG1	81	84.412	Callithrix_jacchus
ENSSARG00000012981	LSG1	69	90.435	ENSCAFG00000013445	LSG1	73	90.435	Canis_familiaris
ENSSARG00000012981	LSG1	81	80.290	ENSCAFG00020002216	LSG1	74	90.435	Canis_lupus_dingo
ENSSARG00000012981	LSG1	81	80.702	ENSCHIG00000015769	LSG1	82	80.702	Capra_hircus
ENSSARG00000012981	LSG1	81	82.405	ENSTSYG00000001447	LSG1	81	82.405	Carlito_syrichta
ENSSARG00000012981	LSG1	72	85.217	ENSCAPG00000009856	LSG1	75	85.217	Cavia_aperea
ENSSARG00000012981	LSG1	81	82.596	ENSCCAG00000035744	LSG1	81	82.596	Cebus_capucinus
ENSSARG00000012981	LSG1	81	84.118	ENSCATG00000042060	LSG1	81	84.118	Cercocebus_atys
ENSSARG00000012981	LSG1	81	84.118	ENSCSAG00000008796	LSG1	74	84.118	Chlorocebus_sabaeus
ENSSARG00000012981	LSG1	81	70.058	ENSCPBG00000015941	LSG1	68	70.058	Chrysemys_picta_bellii
ENSSARG00000012981	LSG1	53	53.043	ENSCING00000007079	-	73	53.043	Ciona_intestinalis
ENSSARG00000012981	LSG1	52	52.697	ENSCSAVG00000002514	-	59	64.912	Ciona_savignyi
ENSSARG00000012981	LSG1	81	84.706	ENSCANG00000030709	LSG1	81	84.706	Colobus_angolensis_palliatus
ENSSARG00000012981	LSG1	84	81.389	ENSCGRG00001019846	Lsg1	83	81.579	Cricetulus_griseus_chok1gshd
ENSSARG00000012981	LSG1	84	81.389	ENSCGRG00000014617	Lsg1	83	81.579	Cricetulus_griseus_crigri
ENSSARG00000012981	LSG1	72	71.304	ENSCSEG00000008522	lsg1	83	65.294	Cynoglossus_semilaevis
ENSSARG00000012981	LSG1	70	73.043	ENSCVAG00000002484	lsg1	83	68.563	Cyprinodon_variegatus
ENSSARG00000012981	LSG1	83	66.857	ENSDARG00000015352	lsg1	82	67.742	Danio_rerio
ENSSARG00000012981	LSG1	83	81.337	ENSDNOG00000006224	LSG1	81	81.818	Dasypus_novemcinctus
ENSSARG00000012981	LSG1	65	59.130	FBgn0266284	Ns3	70	59.130	Drosophila_melanogaster
ENSSARG00000012981	LSG1	66	95.238	ENSETEG00000003888	LSG1	64	93.878	Echinops_telfairi
ENSSARG00000012981	LSG1	71	65.217	ENSEBUG00000003119	lsg1	69	65.217	Eptatretus_burgeri
ENSSARG00000012981	LSG1	81	82.991	ENSEASG00005000678	LSG1	81	82.991	Equus_asinus_asinus
ENSSARG00000012981	LSG1	81	83.284	ENSECAG00000017659	LSG1	81	83.284	Equus_caballus
ENSSARG00000012981	LSG1	71	87.113	ENSEEUG00000015217	LSG1	68	87.113	Erinaceus_europaeus
ENSSARG00000012981	LSG1	84	60.665	ENSELUG00000023973	lsg1	84	63.081	Esox_lucius
ENSSARG00000012981	LSG1	81	83.333	ENSFCAG00000024957	LSG1	81	83.333	Felis_catus
ENSSARG00000012981	LSG1	69	69.298	ENSFALG00000007210	LSG1	70	69.298	Ficedula_albicollis
ENSSARG00000012981	LSG1	81	78.171	ENSFDAG00000017373	LSG1	82	78.235	Fukomys_damarensis
ENSSARG00000012981	LSG1	71	70.435	ENSFHEG00000003680	lsg1	84	66.667	Fundulus_heteroclitus
ENSSARG00000012981	LSG1	73	67.987	ENSGMOG00000015834	lsg1	79	67.987	Gadus_morhua
ENSSARG00000012981	LSG1	69	72.174	ENSGALG00000007058	LSG1	61	72.174	Gallus_gallus
ENSSARG00000012981	LSG1	79	65.598	ENSGAFG00000015831	lsg1	83	66.372	Gambusia_affinis
ENSSARG00000012981	LSG1	72	70.588	ENSGACG00000009323	lsg1	82	64.348	Gasterosteus_aculeatus
ENSSARG00000012981	LSG1	81	83.824	ENSGGOG00000000520	LSG1	81	83.824	Gorilla_gorilla
ENSSARG00000012981	LSG1	84	62.534	ENSHBUG00000005659	lsg1	82	66.272	Haplochromis_burtoni
ENSSARG00000012981	LSG1	84	75.487	ENSHGLG00000017390	LSG1	83	77.126	Heterocephalus_glaber_female
ENSSARG00000012981	LSG1	84	75.487	ENSHGLG00100018587	LSG1	83	77.126	Heterocephalus_glaber_male
ENSSARG00000012981	LSG1	79	64.638	ENSHCOG00000016848	lsg1	77	70.627	Hippocampus_comes
ENSSARG00000012981	LSG1	83	63.788	ENSIPUG00000008631	lsg1	83	65.507	Ictalurus_punctatus
ENSSARG00000012981	LSG1	57	81.121	ENSSTOG00000010234	LSG1	76	81.121	Ictidomys_tridecemlineatus
ENSSARG00000012981	LSG1	81	79.592	ENSJJAG00000015513	Lsg1	82	79.592	Jaculus_jaculus
ENSSARG00000012981	LSG1	78	63.582	ENSKMAG00000009681	lsg1	85	63.582	Kryptolebias_marmoratus
ENSSARG00000012981	LSG1	72	71.044	ENSLBEG00000024261	lsg1	86	64.620	Labrus_bergylta
ENSSARG00000012981	LSG1	82	67.529	ENSLACG00000013399	LSG1	81	67.544	Latimeria_chalumnae
ENSSARG00000012981	LSG1	81	65.439	ENSLOCG00000004918	lsg1	81	66.181	Lepisosteus_oculatus
ENSSARG00000012981	LSG1	84	78.830	ENSLAFG00000012919	-	82	78.592	Loxodonta_africana
ENSSARG00000012981	LSG1	81	84.412	ENSMFAG00000039903	LSG1	81	84.412	Macaca_fascicularis
ENSSARG00000012981	LSG1	81	83.824	ENSMMUG00000010708	LSG1	81	83.824	Macaca_mulatta
ENSSARG00000012981	LSG1	81	84.118	ENSMNEG00000031538	LSG1	81	84.118	Macaca_nemestrina
ENSSARG00000012981	LSG1	81	84.412	ENSMLEG00000041184	LSG1	81	84.412	Mandrillus_leucophaeus
ENSSARG00000012981	LSG1	82	64.543	ENSMAMG00000000470	lsg1	84	66.568	Mastacembelus_armatus
ENSSARG00000012981	LSG1	84	62.810	ENSMZEG00005017865	lsg1	82	66.568	Maylandia_zebra
ENSSARG00000012981	LSG1	69	72.174	ENSMGAG00000007050	LSG1	78	72.174	Meleagris_gallopavo
ENSSARG00000012981	LSG1	72	79.505	ENSMAUG00000016976	Lsg1	75	79.505	Mesocricetus_auratus
ENSSARG00000012981	LSG1	81	80.938	ENSMICG00000049087	LSG1	82	80.938	Microcebus_murinus
ENSSARG00000012981	LSG1	81	78.717	ENSMOCG00000022136	Lsg1	83	79.009	Microtus_ochrogaster
ENSSARG00000012981	LSG1	73	70.861	ENSMMOG00000008884	lsg1	88	67.692	Mola_mola
ENSSARG00000012981	LSG1	84	57.576	ENSMODG00000019828	LSG1	83	56.734	Monodelphis_domestica
ENSSARG00000012981	LSG1	81	77.551	MGP_CAROLIEiJ_G0020648	Lsg1	82	78.717	Mus_caroli
ENSSARG00000012981	LSG1	81	77.259	ENSMUSG00000022538	Lsg1	82	78.592	Mus_musculus
ENSSARG00000012981	LSG1	80	77.713	MGP_PahariEiJ_G0016352	Lsg1	82	79.532	Mus_pahari
ENSSARG00000012981	LSG1	81	77.551	MGP_SPRETEiJ_G0021544	Lsg1	82	78.886	Mus_spretus
ENSSARG00000012981	LSG1	81	81.871	ENSMPUG00000003734	LSG1	81	81.871	Mustela_putorius_furo
ENSSARG00000012981	LSG1	81	83.965	ENSMLUG00000012548	LSG1	82	83.965	Myotis_lucifugus
ENSSARG00000012981	LSG1	81	78.529	ENSNGAG00000021872	Lsg1	83	78.529	Nannospalax_galili
ENSSARG00000012981	LSG1	81	84.118	ENSNLEG00000008293	LSG1	81	84.118	Nomascus_leucogenys
ENSSARG00000012981	LSG1	69	67.313	ENSMEUG00000009041	-	81	67.930	Notamacropus_eugenii
ENSSARG00000012981	LSG1	83	63.333	ENSONIG00000002635	lsg1	82	66.374	Oreochromis_niloticus
ENSSARG00000012981	LSG1	72	79.661	ENSOANG00000012742	LSG1	75	79.661	Ornithorhynchus_anatinus
ENSSARG00000012981	LSG1	81	82.111	ENSOCUG00000004817	LSG1	81	82.111	Oryctolagus_cuniculus
ENSSARG00000012981	LSG1	78	66.366	ENSORLG00000007695	lsg1	86	65.487	Oryzias_latipes
ENSSARG00000012981	LSG1	78	65.766	ENSORLG00020016286	lsg1	85	64.897	Oryzias_latipes_hni
ENSSARG00000012981	LSG1	78	66.066	ENSORLG00015012025	lsg1	86	66.066	Oryzias_latipes_hsok
ENSSARG00000012981	LSG1	78	65.075	ENSOMEG00000022379	lsg1	86	64.223	Oryzias_melastigma
ENSSARG00000012981	LSG1	81	79.883	ENSOGAG00000003475	LSG1	81	79.883	Otolemur_garnettii
ENSSARG00000012981	LSG1	81	81.341	ENSOARG00000020403	LSG1	82	81.341	Ovis_aries
ENSSARG00000012981	LSG1	84	82.682	ENSPPAG00000029271	LSG1	81	83.529	Pan_paniscus
ENSSARG00000012981	LSG1	81	81.948	ENSPPRG00000010281	LSG1	82	81.948	Panthera_pardus
ENSSARG00000012981	LSG1	81	83.626	ENSPTIG00000010789	LSG1	81	83.626	Panthera_tigris_altaica
ENSSARG00000012981	LSG1	84	82.402	ENSPTRG00000015760	LSG1	81	83.235	Pan_troglodytes
ENSSARG00000012981	LSG1	81	84.706	ENSPANG00000018249	LSG1	81	84.706	Papio_anubis
ENSSARG00000012981	LSG1	81	64.426	ENSPKIG00000002895	lsg1	82	65.982	Paramormyrops_kingsleyae
ENSSARG00000012981	LSG1	71	76.147	ENSPSIG00000009821	LSG1	72	76.147	Pelodiscus_sinensis
ENSSARG00000012981	LSG1	70	67.797	ENSPMGG00000000931	lsg1	74	68.696	Periophthalmus_magnuspinnatus
ENSSARG00000012981	LSG1	84	79.778	ENSPEMG00000012082	-	82	79.532	Peromyscus_maniculatus_bairdii
ENSSARG00000012981	LSG1	84	58.221	ENSPMAG00000007451	lsg1	82	60.000	Petromyzon_marinus
ENSSARG00000012981	LSG1	84	65.169	ENSPCIG00000013890	LSG1	67	67.500	Phascolarctos_cinereus
ENSSARG00000012981	LSG1	81	64.167	ENSPFOG00000021882	lsg1	82	66.471	Poecilia_formosa
ENSSARG00000012981	LSG1	81	64.067	ENSPLAG00000019536	lsg1	81	66.471	Poecilia_latipinna
ENSSARG00000012981	LSG1	72	69.492	ENSPMEG00000017281	lsg1	82	66.082	Poecilia_mexicana
ENSSARG00000012981	LSG1	79	50.562	ENSPREG00000006048	lsg1	82	51.031	Poecilia_reticulata
ENSSARG00000012981	LSG1	76	79.545	ENSPPYG00000014425	LSG1	80	80.345	Pongo_abelii
ENSSARG00000012981	LSG1	67	92.308	ENSPCAG00000005511	LSG1	55	92.308	Procavia_capensis
ENSSARG00000012981	LSG1	81	81.471	ENSPCOG00000012360	LSG1	81	81.471	Propithecus_coquereli
ENSSARG00000012981	LSG1	84	62.259	ENSPNYG00000021994	lsg1	81	65.976	Pundamilia_nyererei
ENSSARG00000012981	LSG1	84	64.384	ENSPNAG00000015533	lsg1	81	66.374	Pygocentrus_nattereri
ENSSARG00000012981	LSG1	81	78.613	ENSRNOG00000001727	Lsg1	82	78.613	Rattus_norvegicus
ENSSARG00000012981	LSG1	81	83.824	ENSRBIG00000029053	LSG1	81	83.824	Rhinopithecus_bieti
ENSSARG00000012981	LSG1	81	83.824	ENSRROG00000037702	LSG1	81	83.824	Rhinopithecus_roxellana
ENSSARG00000012981	LSG1	81	83.529	ENSSBOG00000034938	LSG1	81	83.529	Saimiri_boliviensis_boliviensis
ENSSARG00000012981	LSG1	62	94.000	ENSSHAG00000003487	LSG1	75	94.000	Sarcophilus_harrisii
ENSSARG00000012981	LSG1	82	64.624	ENSSFOG00015008955	lsg1	83	65.789	Scleropages_formosus
ENSSARG00000012981	LSG1	82	64.088	ENSSDUG00000004622	lsg1	81	65.396	Seriola_dumerili
ENSSARG00000012981	LSG1	82	63.536	ENSSLDG00000010869	lsg1	83	64.809	Seriola_lalandi_dorsalis
ENSSARG00000012981	LSG1	84	67.956	ENSSPUG00000016347	LSG1	80	69.388	Sphenodon_punctatus
ENSSARG00000012981	LSG1	74	69.799	ENSSPAG00000005508	lsg1	85	65.385	Stegastes_partitus
ENSSARG00000012981	LSG1	81	78.363	ENSSSCG00000011827	LSG1	82	78.363	Sus_scrofa
ENSSARG00000012981	LSG1	69	69.298	ENSTGUG00000009068	LSG1	78	69.298	Taeniopygia_guttata
ENSSARG00000012981	LSG1	72	70.435	ENSTRUG00000017380	lsg1	81	59.706	Takifugu_rubripes
ENSSARG00000012981	LSG1	63	71.523	ENSTNIG00000015570	lsg1	82	65.396	Tetraodon_nigroviridis
ENSSARG00000012981	LSG1	84	69.806	ENSTTRG00000000559	LSG1	82	69.971	Tursiops_truncatus
ENSSARG00000012981	LSG1	81	82.456	ENSUAMG00000012454	LSG1	81	82.456	Ursus_americanus
ENSSARG00000012981	LSG1	81	82.456	ENSUMAG00000000855	LSG1	81	82.456	Ursus_maritimus
ENSSARG00000012981	LSG1	72	81.389	ENSVPAG00000012400	LSG1	73	82.456	Vicugna_pacos
ENSSARG00000012981	LSG1	69	90.435	ENSVVUG00000008956	LSG1	71	90.435	Vulpes_vulpes
ENSSARG00000012981	LSG1	81	67.139	ENSXETG00000003451	lsg1	82	68.047	Xenopus_tropicalis
ENSSARG00000012981	LSG1	80	63.559	ENSXCOG00000003239	lsg1	83	65.089	Xiphophorus_couchianus
ENSSARG00000012981	LSG1	81	62.881	ENSXMAG00000005536	lsg1	83	65.294	Xiphophorus_maculatus