EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000012988 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 30771 bases
Position: chrGeneScaffold_1796:862-31632
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000011752	ResIII	PF04851.15	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000013014	-	5715	-	ENSSARP00000011752	1904 (aa)	-	UPI0001580BAC

Gene Model

Click here to download ENSSARG00000012988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000012988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000012988	-	72	100.000	ENSG00000111642	CHD4	92	88.785	Homo_sapiens
ENSSARG00000012988	-	63	85.549	ENSAPOG00000020502	-	63	85.549	Acanthochromis_polyacanthus
ENSSARG00000012988	-	67	93.642	ENSAPOG00000008935	chd4a	66	93.642	Acanthochromis_polyacanthus
ENSSARG00000012988	-	72	100.000	ENSAMEG00000014179	-	70	100.000	Ailuropoda_melanoleuca
ENSSARG00000012988	-	69	92.486	ENSACIG00000019310	chd4a	64	92.486	Amphilophus_citrinellus
ENSSARG00000012988	-	55	89.595	ENSACIG00000012387	-	57	89.595	Amphilophus_citrinellus
ENSSARG00000012988	-	69	90.751	ENSAOCG00000000507	-	60	90.751	Amphiprion_ocellaris
ENSSARG00000012988	-	56	94.798	ENSAOCG00000016412	-	59	94.798	Amphiprion_ocellaris
ENSSARG00000012988	-	69	94.798	ENSAPEG00000001757	chd4a	70	94.798	Amphiprion_percula
ENSSARG00000012988	-	66	90.751	ENSAPEG00000005957	-	65	90.751	Amphiprion_percula
ENSSARG00000012988	-	63	85.549	ENSAPEG00000020306	-	63	85.549	Amphiprion_percula
ENSSARG00000012988	-	67	85.549	ENSATEG00000000976	-	62	85.549	Anabas_testudineus
ENSSARG00000012988	-	57	90.751	ENSATEG00000021141	-	63	90.751	Anabas_testudineus
ENSSARG00000012988	-	70	94.798	ENSATEG00000016428	chd4a	66	93.678	Anabas_testudineus
ENSSARG00000012988	-	71	97.110	ENSAPLG00000014146	-	68	97.110	Anas_platyrhynchos
ENSSARG00000012988	-	71	96.532	ENSACAG00000006231	-	69	96.532	Anolis_carolinensis
ENSSARG00000012988	-	72	100.000	ENSANAG00000035685	-	72	100.000	Aotus_nancymaae
ENSSARG00000012988	-	65	89.595	ENSACLG00000024468	-	63	89.595	Astatotilapia_calliptera
ENSSARG00000012988	-	68	97.826	ENSACLG00000015837	chd4a	63	93.064	Astatotilapia_calliptera
ENSSARG00000012988	-	66	96.532	ENSAMXG00000019969	chd4a	68	96.532	Astyanax_mexicanus
ENSSARG00000012988	-	61	92.486	ENSAMXG00000010614	-	65	92.486	Astyanax_mexicanus
ENSSARG00000012988	-	71	100.000	ENSBTAG00000014734	CHD4	70	100.000	Bos_taurus
ENSSARG00000012988	-	72	100.000	ENSCJAG00000008114	-	72	100.000	Callithrix_jacchus
ENSSARG00000012988	-	72	100.000	ENSCAFG00000014929	CHD4	70	100.000	Canis_familiaris
ENSSARG00000012988	-	72	100.000	ENSCAFG00020002892	-	70	100.000	Canis_lupus_dingo
ENSSARG00000012988	-	71	100.000	ENSCHIG00000020766	-	70	100.000	Capra_hircus
ENSSARG00000012988	-	73	100.000	ENSTSYG00000006069	-	70	100.000	Carlito_syrichta
ENSSARG00000012988	-	73	100.000	ENSCPOG00000008504	-	70	100.000	Cavia_porcellus
ENSSARG00000012988	-	72	100.000	ENSCCAG00000009686	-	70	100.000	Cebus_capucinus
ENSSARG00000012988	-	72	100.000	ENSCATG00000006345	-	70	100.000	Cercocebus_atys
ENSSARG00000012988	-	71	100.000	ENSCLAG00000012244	-	70	100.000	Chinchilla_lanigera
ENSSARG00000012988	-	72	100.000	ENSCSAG00000010429	-	70	100.000	Chlorocebus_sabaeus
ENSSARG00000012988	-	68	100.000	ENSCHOG00000000277	-	66	100.000	Choloepus_hoffmanni
ENSSARG00000012988	-	68	98.266	ENSCPBG00000027716	-	66	98.266	Chrysemys_picta_bellii
ENSSARG00000012988	-	59	77.273	ENSCSAVG00000004448	-	67	69.186	Ciona_savignyi
ENSSARG00000012988	-	72	100.000	ENSCANG00000035317	-	75	100.000	Colobus_angolensis_palliatus
ENSSARG00000012988	-	71	100.000	ENSCGRG00001020662	Chd4	70	100.000	Cricetulus_griseus_chok1gshd
ENSSARG00000012988	-	71	100.000	ENSCGRG00000015920	Chd4	71	100.000	Cricetulus_griseus_crigri
ENSSARG00000012988	-	64	89.017	ENSCSEG00000019943	-	62	89.017	Cynoglossus_semilaevis
ENSSARG00000012988	-	63	85.549	ENSCSEG00000018096	-	62	85.549	Cynoglossus_semilaevis
ENSSARG00000012988	-	64	94.798	ENSCSEG00000017173	chd4a	64	94.798	Cynoglossus_semilaevis
ENSSARG00000012988	-	62	84.971	ENSCVAG00000016412	-	61	84.971	Cyprinodon_variegatus
ENSSARG00000012988	-	65	90.173	ENSCVAG00000001128	-	64	90.173	Cyprinodon_variegatus
ENSSARG00000012988	-	69	94.220	ENSCVAG00000004940	chd4a	67	94.220	Cyprinodon_variegatus
ENSSARG00000012988	-	66	93.064	ENSDARG00000063535	chd4a	65	93.064	Danio_rerio
ENSSARG00000012988	-	73	100.000	ENSDNOG00000001134	-	70	100.000	Dasypus_novemcinctus
ENSSARG00000012988	-	73	100.000	ENSDORG00000001847	Chd4	69	100.000	Dipodomys_ordii
ENSSARG00000012988	-	56	85.549	ENSEBUG00000012670	chd4a	72	85.549	Eptatretus_burgeri
ENSSARG00000012988	-	72	100.000	ENSEASG00005016150	-	70	100.000	Equus_asinus_asinus
ENSSARG00000012988	-	72	100.000	ENSECAG00000022005	CHD4	70	100.000	Equus_caballus
ENSSARG00000012988	-	67	92.157	ENSELUG00000018086	-	66	91.329	Esox_lucius
ENSSARG00000012988	-	62	95.918	ENSELUG00000021276	chd4a	63	93.642	Esox_lucius
ENSSARG00000012988	-	72	100.000	ENSFCAG00000006877	-	70	100.000	Felis_catus
ENSSARG00000012988	-	63	97.110	ENSFALG00000004785	-	73	97.110	Ficedula_albicollis
ENSSARG00000012988	-	71	100.000	ENSFDAG00000020219	-	71	100.000	Fukomys_damarensis
ENSSARG00000012988	-	54	95.918	ENSFHEG00000012736	-	60	90.173	Fundulus_heteroclitus
ENSSARG00000012988	-	63	84.971	ENSFHEG00000003253	-	64	84.971	Fundulus_heteroclitus
ENSSARG00000012988	-	64	93.064	ENSFHEG00000002013	chd4a	67	93.064	Fundulus_heteroclitus
ENSSARG00000012988	-	59	90.173	ENSGAFG00000014337	-	66	90.173	Gambusia_affinis
ENSSARG00000012988	-	66	94.220	ENSGAFG00000002778	chd4a	62	94.220	Gambusia_affinis
ENSSARG00000012988	-	70	95.918	ENSGACG00000018705	chd4a	67	94.220	Gasterosteus_aculeatus
ENSSARG00000012988	-	68	98.266	ENSGAGG00000001416	-	66	98.266	Gopherus_agassizii
ENSSARG00000012988	-	72	100.000	ENSGGOG00000001930	CHD4	70	100.000	Gorilla_gorilla
ENSSARG00000012988	-	68	97.826	ENSHBUG00000019146	chd4a	66	93.064	Haplochromis_burtoni
ENSSARG00000012988	-	65	89.595	ENSHBUG00000016000	-	63	89.595	Haplochromis_burtoni
ENSSARG00000012988	-	71	100.000	ENSHGLG00000003093	-	70	100.000	Heterocephalus_glaber_female
ENSSARG00000012988	-	71	100.000	ENSHGLG00100007450	-	70	100.000	Heterocephalus_glaber_male
ENSSARG00000012988	-	59	86.127	ENSHCOG00000014308	-	68	86.127	Hippocampus_comes
ENSSARG00000012988	-	53	90.173	ENSHCOG00000017525	-	60	90.173	Hippocampus_comes
ENSSARG00000012988	-	63	95.954	ENSIPUG00000005694	chd4	64	95.954	Ictalurus_punctatus
ENSSARG00000012988	-	71	100.000	ENSSTOG00000007601	-	70	100.000	Ictidomys_tridecemlineatus
ENSSARG00000012988	-	73	100.000	ENSJJAG00000012394	Chd4	70	100.000	Jaculus_jaculus
ENSSARG00000012988	-	65	90.173	ENSKMAG00000007932	-	60	90.173	Kryptolebias_marmoratus
ENSSARG00000012988	-	64	95.745	ENSKMAG00000019286	chd4a	64	93.064	Kryptolebias_marmoratus
ENSSARG00000012988	-	57	84.393	ENSKMAG00000017827	-	59	84.393	Kryptolebias_marmoratus
ENSSARG00000012988	-	51	84.971	ENSLBEG00000026652	-	60	84.971	Labrus_bergylta
ENSSARG00000012988	-	66	94.118	ENSLBEG00000012434	CHD4	60	90.751	Labrus_bergylta
ENSSARG00000012988	-	64	93.642	ENSLOCG00000007438	chd4a	66	93.642	Lepisosteus_oculatus
ENSSARG00000012988	-	72	100.000	ENSLAFG00000022842	-	70	100.000	Loxodonta_africana
ENSSARG00000012988	-	72	100.000	ENSMFAG00000003188	-	70	100.000	Macaca_fascicularis
ENSSARG00000012988	-	72	100.000	ENSMMUG00000018685	-	70	100.000	Macaca_mulatta
ENSSARG00000012988	-	72	100.000	ENSMNEG00000044776	-	70	100.000	Macaca_nemestrina
ENSSARG00000012988	-	72	100.000	ENSMLEG00000024661	-	72	100.000	Mandrillus_leucophaeus
ENSSARG00000012988	-	72	94.220	ENSMAMG00000018954	chd4a	62	94.220	Mastacembelus_armatus
ENSSARG00000012988	-	64	86.127	ENSMAMG00000002137	-	62	86.127	Mastacembelus_armatus
ENSSARG00000012988	-	69	90.173	ENSMAMG00000002584	-	60	90.173	Mastacembelus_armatus
ENSSARG00000012988	-	69	98.000	ENSMZEG00005001706	chd4a	66	93.064	Maylandia_zebra
ENSSARG00000012988	-	65	89.595	ENSMZEG00005017761	-	63	89.595	Maylandia_zebra
ENSSARG00000012988	-	71	97.110	ENSMGAG00000014084	-	68	97.110	Meleagris_gallopavo
ENSSARG00000012988	-	72	100.000	ENSMICG00000006588	-	70	100.000	Microcebus_murinus
ENSSARG00000012988	-	71	100.000	ENSMOCG00000020624	Chd4	70	100.000	Microtus_ochrogaster
ENSSARG00000012988	-	66	90.173	ENSMMOG00000015971	-	63	90.173	Mola_mola
ENSSARG00000012988	-	69	95.918	ENSMMOG00000000073	chd4a	65	95.376	Mola_mola
ENSSARG00000012988	-	59	85.549	ENSMMOG00000013429	-	66	85.549	Mola_mola
ENSSARG00000012988	-	57	100.000	ENSMODG00000018094	-	67	100.000	Monodelphis_domestica
ENSSARG00000012988	-	69	90.173	ENSMALG00000022494	-	60	90.173	Monopterus_albus
ENSSARG00000012988	-	70	94.340	ENSMALG00000005766	chd4a	67	93.333	Monopterus_albus
ENSSARG00000012988	-	73	100.000	ENSMUSG00000063870	Chd4	70	100.000	Mus_musculus
ENSSARG00000012988	-	73	100.000	MGP_SPRETEiJ_G0029911	Chd4	70	100.000	Mus_spretus
ENSSARG00000012988	-	72	100.000	ENSMPUG00000016859	-	70	100.000	Mustela_putorius_furo
ENSSARG00000012988	-	72	100.000	ENSMLUG00000014343	-	70	100.000	Myotis_lucifugus
ENSSARG00000012988	-	73	100.000	ENSNGAG00000016920	Chd4	70	100.000	Nannospalax_galili
ENSSARG00000012988	-	65	89.595	ENSNBRG00000021576	-	63	89.595	Neolamprologus_brichardi
ENSSARG00000012988	-	73	100.000	ENSNLEG00000004330	-	68	100.000	Nomascus_leucogenys
ENSSARG00000012988	-	62	100.000	ENSMEUG00000015294	-	60	100.000	Notamacropus_eugenii
ENSSARG00000012988	-	63	100.000	ENSOPRG00000003477	-	58	100.000	Ochotona_princeps
ENSSARG00000012988	-	72	100.000	ENSODEG00000003114	-	69	100.000	Octodon_degus
ENSSARG00000012988	-	69	98.000	ENSONIG00000006992	chd4a	63	95.556	Oreochromis_niloticus
ENSSARG00000012988	-	69	89.595	ENSONIG00000012953	-	62	89.595	Oreochromis_niloticus
ENSSARG00000012988	-	71	100.000	ENSOCUG00000008215	-	70	100.000	Oryctolagus_cuniculus
ENSSARG00000012988	-	66	90.751	ENSORLG00000012477	-	61	90.751	Oryzias_latipes
ENSSARG00000012988	-	69	92.486	ENSORLG00000006310	chd4a	60	92.486	Oryzias_latipes
ENSSARG00000012988	-	65	85.549	ENSORLG00000017190	-	63	85.549	Oryzias_latipes
ENSSARG00000012988	-	59	85.549	ENSORLG00020011739	-	67	85.549	Oryzias_latipes_hni
ENSSARG00000012988	-	66	90.751	ENSORLG00020004891	-	60	90.751	Oryzias_latipes_hni
ENSSARG00000012988	-	69	92.486	ENSORLG00020006529	chd4a	60	92.486	Oryzias_latipes_hni
ENSSARG00000012988	-	69	92.486	ENSORLG00015019674	chd4a	60	92.486	Oryzias_latipes_hsok
ENSSARG00000012988	-	66	90.751	ENSORLG00015010692	-	63	90.751	Oryzias_latipes_hsok
ENSSARG00000012988	-	63	85.549	ENSOMEG00000014929	-	63	85.549	Oryzias_melastigma
ENSSARG00000012988	-	67	90.751	ENSOMEG00000013408	-	61	90.751	Oryzias_melastigma
ENSSARG00000012988	-	66	91.908	ENSOMEG00000016394	chd4a	63	91.908	Oryzias_melastigma
ENSSARG00000012988	-	72	100.000	ENSOGAG00000010031	-	70	100.000	Otolemur_garnettii
ENSSARG00000012988	-	73	100.000	ENSOARG00000007398	-	71	100.000	Ovis_aries
ENSSARG00000012988	-	72	100.000	ENSPPAG00000029007	-	70	100.000	Pan_paniscus
ENSSARG00000012988	-	72	100.000	ENSPPRG00000001388	-	70	100.000	Panthera_pardus
ENSSARG00000012988	-	72	100.000	ENSPTIG00000010979	-	70	100.000	Panthera_tigris_altaica
ENSSARG00000012988	-	72	100.000	ENSPTRG00000004580	CHD4	70	100.000	Pan_troglodytes
ENSSARG00000012988	-	72	100.000	ENSPANG00000025409	-	70	100.000	Papio_anubis
ENSSARG00000012988	-	60	90.751	ENSPKIG00000012023	-	60	90.751	Paramormyrops_kingsleyae
ENSSARG00000012988	-	71	95.376	ENSPKIG00000008268	chd4a	64	95.376	Paramormyrops_kingsleyae
ENSSARG00000012988	-	71	97.688	ENSPSIG00000015546	-	69	97.688	Pelodiscus_sinensis
ENSSARG00000012988	-	57	85.549	ENSPMGG00000007681	-	64	85.549	Periophthalmus_magnuspinnatus
ENSSARG00000012988	-	66	91.908	ENSPMGG00000022981	chd4a	68	91.908	Periophthalmus_magnuspinnatus
ENSSARG00000012988	-	71	100.000	ENSPEMG00000010290	Chd4	69	100.000	Peromyscus_maniculatus_bairdii
ENSSARG00000012988	-	67	100.000	ENSPCIG00000001846	-	71	100.000	Phascolarctos_cinereus
ENSSARG00000012988	-	69	95.918	ENSPFOG00000009089	chd4a	62	94.220	Poecilia_formosa
ENSSARG00000012988	-	64	84.971	ENSPFOG00000016981	-	63	84.971	Poecilia_formosa
ENSSARG00000012988	-	65	90.173	ENSPFOG00000013889	-	63	90.173	Poecilia_formosa
ENSSARG00000012988	-	64	94.220	ENSPLAG00000012712	chd4a	62	94.220	Poecilia_latipinna
ENSSARG00000012988	-	69	90.173	ENSPLAG00000004006	-	62	90.173	Poecilia_latipinna
ENSSARG00000012988	-	57	90.173	ENSPMEG00000006064	-	57	90.173	Poecilia_mexicana
ENSSARG00000012988	-	66	84.971	ENSPMEG00000015657	-	61	84.971	Poecilia_mexicana
ENSSARG00000012988	-	66	94.220	ENSPMEG00000009633	chd4a	65	94.220	Poecilia_mexicana
ENSSARG00000012988	-	68	90.173	ENSPREG00000011359	-	60	90.173	Poecilia_reticulata
ENSSARG00000012988	-	62	84.971	ENSPREG00000014285	-	62	84.971	Poecilia_reticulata
ENSSARG00000012988	-	69	95.918	ENSPREG00000001202	chd4a	64	94.220	Poecilia_reticulata
ENSSARG00000012988	-	73	100.000	ENSPPYG00000004192	-	71	100.000	Pongo_abelii
ENSSARG00000012988	-	51	100.000	ENSPCAG00000007120	-	59	100.000	Procavia_capensis
ENSSARG00000012988	-	71	100.000	ENSPCOG00000018635	-	70	100.000	Propithecus_coquereli
ENSSARG00000012988	-	73	100.000	ENSPVAG00000012574	-	72	100.000	Pteropus_vampyrus
ENSSARG00000012988	-	64	96.226	ENSPNYG00000002663	chd4a	62	95.556	Pundamilia_nyererei
ENSSARG00000012988	-	69	89.595	ENSPNYG00000023020	-	61	89.595	Pundamilia_nyererei
ENSSARG00000012988	-	66	96.532	ENSPNAG00000009629	chd4a	67	96.532	Pygocentrus_nattereri
ENSSARG00000012988	-	60	91.908	ENSPNAG00000011129	-	63	91.908	Pygocentrus_nattereri
ENSSARG00000012988	-	73	100.000	ENSRNOG00000018309	Chd4	70	100.000	Rattus_norvegicus
ENSSARG00000012988	-	69	100.000	ENSRBIG00000041491	-	69	100.000	Rhinopithecus_bieti
ENSSARG00000012988	-	72	100.000	ENSRROG00000042446	-	70	100.000	Rhinopithecus_roxellana
ENSSARG00000012988	-	70	100.000	ENSSBOG00000020782	-	72	100.000	Saimiri_boliviensis_boliviensis
ENSSARG00000012988	-	55	100.000	ENSSHAG00000015079	-	61	98.246	Sarcophilus_harrisii
ENSSARG00000012988	-	67	95.376	ENSSFOG00015002908	chd4	65	95.376	Scleropages_formosus
ENSSARG00000012988	-	72	95.918	ENSSMAG00000012594	chd4a	64	95.376	Scophthalmus_maximus
ENSSARG00000012988	-	63	84.971	ENSSMAG00000017926	-	60	84.971	Scophthalmus_maximus
ENSSARG00000012988	-	70	92.157	ENSSMAG00000010969	-	62	90.173	Scophthalmus_maximus
ENSSARG00000012988	-	62	95.918	ENSSDUG00000002891	chd4a	65	94.220	Seriola_dumerili
ENSSARG00000012988	-	62	90.173	ENSSDUG00000012051	-	62	90.173	Seriola_dumerili
ENSSARG00000012988	-	60	89.595	ENSSLDG00000023821	-	59	89.595	Seriola_lalandi_dorsalis
ENSSARG00000012988	-	65	84.971	ENSSLDG00000019750	-	66	84.971	Seriola_lalandi_dorsalis
ENSSARG00000012988	-	65	91.908	ENSSLDG00000018645	chd4a	59	91.908	Seriola_lalandi_dorsalis
ENSSARG00000012988	-	68	95.954	ENSSPUG00000015131	-	69	95.954	Sphenodon_punctatus
ENSSARG00000012988	-	64	94.798	ENSSPAG00000013983	chd4a	67	94.798	Stegastes_partitus
ENSSARG00000012988	-	63	85.549	ENSSPAG00000018749	-	62	95.122	Stegastes_partitus
ENSSARG00000012988	-	72	100.000	ENSSSCG00000000697	-	70	100.000	Sus_scrofa
ENSSARG00000012988	-	71	97.110	ENSTGUG00000013329	-	69	97.110	Taeniopygia_guttata
ENSSARG00000012988	-	65	84.393	ENSTRUG00000007623	-	61	84.393	Takifugu_rubripes
ENSSARG00000012988	-	66	95.918	ENSTRUG00000007202	-	62	90.173	Takifugu_rubripes
ENSSARG00000012988	-	71	93.064	ENSTNIG00000004095	-	65	93.064	Tetraodon_nigroviridis
ENSSARG00000012988	-	68	95.918	ENSTNIG00000008031	-	68	95.122	Tetraodon_nigroviridis
ENSSARG00000012988	-	56	100.000	ENSTBEG00000011379	-	59	100.000	Tupaia_belangeri
ENSSARG00000012988	-	72	100.000	ENSTTRG00000016102	-	72	98.039	Tursiops_truncatus
ENSSARG00000012988	-	72	100.000	ENSUAMG00000016452	-	77	100.000	Ursus_americanus
ENSSARG00000012988	-	72	100.000	ENSUMAG00000005336	-	70	100.000	Ursus_maritimus
ENSSARG00000012988	-	72	100.000	ENSVVUG00000011414	-	70	100.000	Vulpes_vulpes
ENSSARG00000012988	-	58	90.173	ENSXCOG00000019269	-	57	90.173	Xiphophorus_couchianus
ENSSARG00000012988	-	62	94.220	ENSXMAG00000001037	chd4a	69	94.220	Xiphophorus_maculatus
ENSSARG00000012988	-	67	85.549	ENSXMAG00000014686	-	62	85.549	Xiphophorus_maculatus
ENSSARG00000012988	-	58	90.173	ENSXMAG00000011263	-	57	90.173	Xiphophorus_maculatus