EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000013493 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 18308 bases
Position: chrscaffold_137007:4281-22588
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000012181	DEAD	PF00270.29	1.5e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000013494	-	1644	-	ENSSARP00000012181	548 (aa)	-	UPI000158079D

Gene Model

Click here to download ENSSARG00000013493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000013493's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000013493	-	68	43.570	ENSSARG00000004642	-	77	43.570
ENSSARG00000013493	-	60	37.647	ENSSARG00000005248	DDX18	66	37.647
ENSSARG00000013493	-	67	40.691	ENSSARG00000004206	DDX4	52	40.691
ENSSARG00000013493	-	65	33.427	ENSSARG00000003219	DDX6	72	33.427
ENSSARG00000013493	-	67	35.602	ENSSARG00000003609	DDX41	60	35.602
ENSSARG00000013493	-	65	33.889	ENSSARG00000006017	EIF4A1	87	33.889
ENSSARG00000013493	-	64	31.016	ENSSARG00000014169	DDX28	69	31.016
ENSSARG00000013493	-	59	34.462	ENSSARG00000012922	EIF4A2	78	34.462
ENSSARG00000013493	-	79	32.294	ENSSARG00000013553	DDX50	61	32.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000013493	-	99	85.036	ENSAMEG00000007851	-	84	85.036	Ailuropoda_melanoleuca
ENSSARG00000013493	-	100	80.839	ENSBTAG00000021814	-	84	80.839	Bos_taurus
ENSSARG00000013493	-	99	83.912	ENSCAFG00020010029	-	84	83.912	Canis_lupus_dingo
ENSSARG00000013493	-	99	77.514	ENSCAFG00020002717	-	83	77.514	Canis_lupus_dingo
ENSSARG00000013493	-	100	81.204	ENSCHIG00000017351	-	84	81.204	Capra_hircus
ENSSARG00000013493	-	92	77.183	ENSCAPG00000004247	-	100	77.183	Cavia_aperea
ENSSARG00000013493	-	99	84.826	ENSCPOG00000003991	-	84	84.826	Cavia_porcellus
ENSSARG00000013493	-	99	77.331	ENSCLAG00000010261	-	83	77.331	Chinchilla_lanigera
ENSSARG00000013493	-	69	82.051	ENSCHOG00000003450	-	67	82.051	Choloepus_hoffmanni
ENSSARG00000013493	-	99	87.020	ENSCGRG00001001145	Ddx43	84	87.020	Cricetulus_griseus_chok1gshd
ENSSARG00000013493	-	99	86.837	ENSCGRG00000010217	Ddx43	97	86.837	Cricetulus_griseus_crigri
ENSSARG00000013493	-	100	88.342	ENSDNOG00000017589	-	84	88.342	Dasypus_novemcinctus
ENSSARG00000013493	-	99	86.472	ENSDORG00000030010	Ddx43	84	86.472	Dipodomys_ordii
ENSSARG00000013493	-	76	91.176	ENSETEG00000001887	-	65	91.176	Echinops_telfairi
ENSSARG00000013493	-	99	90.859	ENSEASG00005004346	-	77	90.859	Equus_asinus_asinus
ENSSARG00000013493	-	99	90.859	ENSECAG00000017971	DDX43	85	90.859	Equus_caballus
ENSSARG00000013493	-	100	82.482	ENSFCAG00000031631	-	84	82.482	Felis_catus
ENSSARG00000013493	-	99	82.267	ENSHGLG00000001118	-	97	82.267	Heterocephalus_glaber_female
ENSSARG00000013493	-	99	82.267	ENSHGLG00100011895	-	86	82.267	Heterocephalus_glaber_male
ENSSARG00000013493	-	99	75.868	ENSSTOG00000032538	-	96	75.868	Ictidomys_tridecemlineatus
ENSSARG00000013493	-	99	85.558	ENSJJAG00000014184	Ddx43	84	85.558	Jaculus_jaculus
ENSSARG00000013493	-	99	86.496	ENSLAFG00000012755	-	90	86.496	Loxodonta_africana
ENSSARG00000013493	-	99	86.837	ENSMAUG00000001441	Ddx43	85	86.837	Mesocricetus_auratus
ENSSARG00000013493	-	99	85.923	ENSMOCG00000012956	Ddx43	84	85.923	Microtus_ochrogaster
ENSSARG00000013493	-	99	85.923	MGP_CAROLIEiJ_G0032467	Ddx43	84	85.923	Mus_caroli
ENSSARG00000013493	-	99	86.289	ENSMUSG00000070291	Ddx43	84	86.289	Mus_musculus
ENSSARG00000013493	-	92	87.747	MGP_PahariEiJ_G0015333	Ddx43	86	87.747	Mus_pahari
ENSSARG00000013493	-	99	86.289	MGP_SPRETEiJ_G0033607	Ddx43	84	86.289	Mus_spretus
ENSSARG00000013493	-	100	85.792	ENSMPUG00000004342	-	84	85.792	Mustela_putorius_furo
ENSSARG00000013493	-	99	88.504	ENSMLUG00000017604	-	84	88.504	Myotis_lucifugus
ENSSARG00000013493	-	99	85.375	ENSNGAG00000015102	Ddx43	84	85.375	Nannospalax_galili
ENSSARG00000013493	-	84	83.186	ENSOPRG00000013523	-	81	83.186	Ochotona_princeps
ENSSARG00000013493	-	99	81.319	ENSODEG00000016207	-	99	81.319	Octodon_degus
ENSSARG00000013493	-	99	81.901	ENSOCUG00000006338	-	84	81.901	Oryctolagus_cuniculus
ENSSARG00000013493	-	99	68.498	ENSOCUG00000025811	-	84	68.498	Oryctolagus_cuniculus
ENSSARG00000013493	-	100	81.204	ENSOARG00000010873	-	84	81.204	Ovis_aries
ENSSARG00000013493	-	100	82.847	ENSPTIG00000017842	-	84	82.847	Panthera_tigris_altaica
ENSSARG00000013493	-	99	86.654	ENSPEMG00000023986	Ddx43	97	86.654	Peromyscus_maniculatus_bairdii
ENSSARG00000013493	-	100	86.157	ENSPCAG00000005962	-	85	86.157	Procavia_capensis
ENSSARG00000013493	-	100	89.781	ENSPVAG00000012718	-	97	89.781	Pteropus_vampyrus
ENSSARG00000013493	-	99	86.106	ENSRNOG00000050868	Ddx43	84	86.106	Rattus_norvegicus
ENSSARG00000013493	-	100	83.394	ENSSSCG00000004287	-	84	83.394	Sus_scrofa
ENSSARG00000013493	-	100	74.635	ENSTTRG00000001488	-	96	74.635	Tursiops_truncatus
ENSSARG00000013493	-	80	85.388	ENSUAMG00000012894	-	68	85.388	Ursus_americanus
ENSSARG00000013493	-	100	85.064	ENSUMAG00000012291	-	84	85.064	Ursus_maritimus
ENSSARG00000013493	-	93	76.424	ENSVPAG00000004969	-	83	76.424	Vicugna_pacos
ENSSARG00000013493	-	99	83.729	ENSVVUG00000013908	-	84	83.729	Vulpes_vulpes