EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSARG00000013553 (Gene tree)
Gene ID: -
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 62095 bases
Position: chrGeneScaffold_5199:40523-102617
Accession: 17906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000012243	GUCT	PF08152.12	1.9e-22	1	1
ENSSARP00000012243	ResIII	PF04851.15	1.2e-10	1	1
ENSSARP00000012243	DEAD	PF00270.29	2.8e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000013562	DDX50-201	2205	-	ENSSARP00000012243	734 (aa)	-	UPI0001581649

Gene Model

Click here to download ENSSARG00000013553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000013553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSARG00000013553	DDX50	61	32.294	ENSSARG00000013493	-	79	32.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000013553	DDX50	88	88.217	ENSG00000107625	DDX50	100	80.461	Homo_sapiens
ENSSARG00000013553	DDX50	88	87.926	ENSAMEG00000017992	DDX50	100	80.217	Ailuropoda_melanoleuca
ENSSARG00000013553	DDX50	85	70.126	ENSANAG00000017785	-	86	69.969	Aotus_nancymaae
ENSSARG00000013553	DDX50	88	87.597	ENSBTAG00000033413	DDX50	93	93.388	Bos_taurus
ENSSARG00000013553	DDX50	88	88.217	ENSCJAG00000018844	DDX50	100	80.461	Callithrix_jacchus
ENSSARG00000013553	DDX50	88	88.545	ENSCAFG00000013776	DDX50	94	88.545	Canis_familiaris
ENSSARG00000013553	DDX50	88	88.545	ENSCAFG00020025977	DDX50	99	80.759	Canis_lupus_dingo
ENSSARG00000013553	DDX50	88	87.442	ENSCHIG00000000285	DDX50	99	79.647	Capra_hircus
ENSSARG00000013553	DDX50	88	87.597	ENSTSYG00000004192	DDX50	100	79.783	Carlito_syrichta
ENSSARG00000013553	DDX50	84	77.472	ENSCAPG00000007230	-	82	77.472	Cavia_aperea
ENSSARG00000013553	DDX50	88	87.287	ENSCPOG00000002131	-	88	87.287	Cavia_porcellus
ENSSARG00000013553	DDX50	79	85.686	ENSCCAG00000030543	DDX50	100	85.855	Cebus_capucinus
ENSSARG00000013553	DDX50	87	58.025	ENSCATG00000039259	-	84	58.642	Cercocebus_atys
ENSSARG00000013553	DDX50	88	62.809	ENSCATG00000035153	-	90	62.809	Cercocebus_atys
ENSSARG00000013553	DDX50	88	85.404	ENSCATG00000032463	DDX50	99	77.989	Cercocebus_atys
ENSSARG00000013553	DDX50	97	57.203	ENSCLAG00000001938	-	85	62.660	Chinchilla_lanigera
ENSSARG00000013553	DDX50	88	87.442	ENSCLAG00000012957	-	100	79.919	Chinchilla_lanigera
ENSSARG00000013553	DDX50	88	88.217	ENSCSAG00000007703	DDX50	100	80.461	Chlorocebus_sabaeus
ENSSARG00000013553	DDX50	84	85.552	ENSCHOG00000000233	DDX50	92	85.552	Choloepus_hoffmanni
ENSSARG00000013553	DDX50	74	62.546	ENSCANG00000018820	-	83	62.915	Colobus_angolensis_palliatus
ENSSARG00000013553	DDX50	86	74.127	ENSCANG00000036450	-	86	74.127	Colobus_angolensis_palliatus
ENSSARG00000013553	DDX50	88	59.231	ENSCANG00000028077	-	86	58.308	Colobus_angolensis_palliatus
ENSSARG00000013553	DDX50	88	86.047	ENSCGRG00001020223	Ddx50	100	78.562	Cricetulus_griseus_chok1gshd
ENSSARG00000013553	DDX50	88	86.047	ENSCGRG00000015884	Ddx50	88	86.047	Cricetulus_griseus_crigri
ENSSARG00000013553	DDX50	88	80.556	ENSDNOG00000001675	DDX50	100	80.556	Dasypus_novemcinctus
ENSSARG00000013553	DDX50	88	86.977	ENSDORG00000007310	Ddx50	100	79.240	Dipodomys_ordii
ENSSARG00000013553	DDX50	78	85.915	ENSETEG00000014069	DDX50	78	85.915	Echinops_telfairi
ENSSARG00000013553	DDX50	88	88.062	ENSEASG00005015595	DDX50	99	80.326	Equus_asinus_asinus
ENSSARG00000013553	DDX50	88	88.062	ENSECAG00000023044	DDX50	99	80.326	Equus_caballus
ENSSARG00000013553	DDX50	89	89.655	ENSEEUG00000005782	DDX50	89	89.655	Erinaceus_europaeus
ENSSARG00000013553	DDX50	88	88.390	ENSFCAG00000012678	DDX50	99	80.623	Felis_catus
ENSSARG00000013553	DDX50	88	79.845	ENSFDAG00000016109	-	100	73.134	Fukomys_damarensis
ENSSARG00000013553	DDX50	88	88.217	ENSGGOG00000010100	DDX50	100	80.461	Gorilla_gorilla
ENSSARG00000013553	DDX50	88	85.426	ENSHGLG00000013466	DDX50	100	77.883	Heterocephalus_glaber_female
ENSSARG00000013553	DDX50	70	84.516	ENSHGLG00100006568	-	79	84.516	Heterocephalus_glaber_male
ENSSARG00000013553	DDX50	88	85.426	ENSHGLG00100017191	DDX50	100	77.883	Heterocephalus_glaber_male
ENSSARG00000013553	DDX50	86	86.888	ENSSTOG00000021852	-	88	86.478	Ictidomys_tridecemlineatus
ENSSARG00000013553	DDX50	88	85.093	ENSJJAG00000023928	-	100	78.668	Jaculus_jaculus
ENSSARG00000013553	DDX50	92	82.353	ENSJJAG00000019626	-	88	65.741	Jaculus_jaculus
ENSSARG00000013553	DDX50	88	87.287	ENSLAFG00000006186	DDX50	88	87.287	Loxodonta_africana
ENSSARG00000013553	DDX50	86	63.480	ENSMFAG00000045339	-	89	63.480	Macaca_fascicularis
ENSSARG00000013553	DDX50	88	88.217	ENSMFAG00000044067	DDX50	100	80.461	Macaca_fascicularis
ENSSARG00000013553	DDX50	88	88.217	ENSMMUG00000001006	DDX50	100	81.994	Macaca_mulatta
ENSSARG00000013553	DDX50	75	58.559	ENSMMUG00000045343	-	85	52.761	Macaca_mulatta
ENSSARG00000013553	DDX50	88	64.363	ENSMNEG00000045530	-	90	64.363	Macaca_nemestrina
ENSSARG00000013553	DDX50	88	80.930	ENSMNEG00000031664	DDX50	100	74.084	Macaca_nemestrina
ENSSARG00000013553	DDX50	86	88.095	ENSMLEG00000037313	DDX50	86	88.095	Mandrillus_leucophaeus
ENSSARG00000013553	DDX50	86	62.559	ENSMLEG00000041988	-	89	62.559	Mandrillus_leucophaeus
ENSSARG00000013553	DDX50	88	79.814	ENSMICG00000017539	DDX50	87	79.814	Microcebus_murinus
ENSSARG00000013553	DDX50	88	85.626	ENSMOCG00000001676	Ddx50	100	78.214	Microtus_ochrogaster
ENSSARG00000013553	DDX50	88	72.657	ENSMODG00000010741	DDX50	87	73.354	Monodelphis_domestica
ENSSARG00000013553	DDX50	88	84.317	MGP_CAROLIEiJ_G0015389	Ddx50	100	77.582	Mus_caroli
ENSSARG00000013553	DDX50	88	84.783	ENSMUSG00000020076	Ddx50	100	78.125	Mus_musculus
ENSSARG00000013553	DDX50	88	84.938	MGP_PahariEiJ_G0030805	Ddx50	100	78.261	Mus_pahari
ENSSARG00000013553	DDX50	88	84.783	MGP_SPRETEiJ_G0016200	Ddx50	100	78.125	Mus_spretus
ENSSARG00000013553	DDX50	88	86.997	ENSMPUG00000004589	DDX50	99	87.307	Mustela_putorius_furo
ENSSARG00000013553	DDX50	88	86.667	ENSMLUG00000017590	DDX50	100	78.969	Myotis_lucifugus
ENSSARG00000013553	DDX50	88	86.977	ENSNGAG00000004283	Ddx50	100	79.647	Nannospalax_galili
ENSSARG00000013553	DDX50	79	59.758	ENSNLEG00000035506	-	82	59.758	Nomascus_leucogenys
ENSSARG00000013553	DDX50	88	88.217	ENSNLEG00000011631	DDX50	100	80.461	Nomascus_leucogenys
ENSSARG00000013553	DDX50	88	84.961	ENSOPRG00000001619	DDX50	88	85.271	Ochotona_princeps
ENSSARG00000013553	DDX50	88	86.202	ENSODEG00000014597	-	100	78.969	Octodon_degus
ENSSARG00000013553	DDX50	81	64.381	ENSOANG00000004776	DDX50	75	64.381	Ornithorhynchus_anatinus
ENSSARG00000013553	DDX50	88	85.736	ENSOCUG00000002879	DDX50	90	85.736	Oryctolagus_cuniculus
ENSSARG00000013553	DDX50	88	87.287	ENSOGAG00000001844	DDX50	100	79.647	Otolemur_garnettii
ENSSARG00000013553	DDX50	88	87.442	ENSOARG00000005264	DDX50	99	79.647	Ovis_aries
ENSSARG00000013553	DDX50	88	88.062	ENSPPAG00000040723	DDX50	100	80.326	Pan_paniscus
ENSSARG00000013553	DDX50	88	88.390	ENSPPRG00000015826	DDX50	100	80.623	Panthera_pardus
ENSSARG00000013553	DDX50	88	88.390	ENSPTIG00000008454	DDX50	100	80.623	Panthera_tigris_altaica
ENSSARG00000013553	DDX50	88	88.062	ENSPTRG00000002562	DDX50	100	80.326	Pan_troglodytes
ENSSARG00000013553	DDX50	88	80.000	ENSPANG00000022143	-	100	73.270	Papio_anubis
ENSSARG00000013553	DDX50	88	85.426	ENSPEMG00000020899	-	88	85.426	Peromyscus_maniculatus_bairdii
ENSSARG00000013553	DDX50	88	72.923	ENSPCIG00000016036	DDX50	90	72.923	Phascolarctos_cinereus
ENSSARG00000013553	DDX50	91	81.994	ENSPPYG00000002390	DDX50	100	81.994	Pongo_abelii
ENSSARG00000013553	DDX50	84	89.123	ENSPCAG00000009692	DDX50	100	89.123	Procavia_capensis
ENSSARG00000013553	DDX50	79	87.692	ENSPCOG00000012574	DDX50	91	89.062	Propithecus_coquereli
ENSSARG00000013553	DDX50	74	93.939	ENSPVAG00000009519	DDX50	86	93.939	Pteropus_vampyrus
ENSSARG00000013553	DDX50	88	84.161	ENSRNOG00000000396	Ddx50	100	77.717	Rattus_norvegicus
ENSSARG00000013553	DDX50	88	56.790	ENSRBIG00000039673	-	84	56.019	Rhinopithecus_bieti
ENSSARG00000013553	DDX50	86	58.346	ENSRBIG00000036573	-	87	58.970	Rhinopithecus_bieti
ENSSARG00000013553	DDX50	87	86.916	ENSRBIG00000042841	-	98	88.640	Rhinopithecus_bieti
ENSSARG00000013553	DDX50	86	55.124	ENSRROG00000022853	-	86	55.745	Rhinopithecus_roxellana
ENSSARG00000013553	DDX50	88	88.217	ENSRROG00000032158	DDX50	100	81.724	Rhinopithecus_roxellana
ENSSARG00000013553	DDX50	72	96.951	ENSSBOG00000014441	DDX50	91	96.951	Saimiri_boliviensis_boliviensis
ENSSARG00000013553	DDX50	84	73.844	ENSSHAG00000005690	DDX50	87	73.844	Sarcophilus_harrisii
ENSSARG00000013553	DDX50	75	62.943	ENSSHAG00000005334	-	83	58.136	Sarcophilus_harrisii
ENSSARG00000013553	DDX50	88	87.442	ENSSSCG00000010246	DDX50	93	93.939	Sus_scrofa
ENSSARG00000013553	DDX50	88	78.915	ENSTBEG00000001085	DDX50	97	73.464	Tupaia_belangeri
ENSSARG00000013553	DDX50	100	76.662	ENSTTRG00000012408	DDX50	99	76.662	Tursiops_truncatus
ENSSARG00000013553	DDX50	88	88.080	ENSUAMG00000010976	DDX50	100	80.352	Ursus_americanus
ENSSARG00000013553	DDX50	88	88.080	ENSUMAG00000007726	DDX50	99	80.352	Ursus_maritimus
ENSSARG00000013553	DDX50	88	87.287	ENSVPAG00000000626	DDX50	100	79.647	Vicugna_pacos
ENSSARG00000013553	DDX50	82	82.421	ENSVVUG00000020366	DDX50	97	84.327	Vulpes_vulpes