EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000013893 (Gene tree)
Gene ID: -
Gene Symbol: TNPO3
Alias: IPO12|LGMD1F|MTR10A|TRN-SR|TRN-SR2
Full Name: transportin 3
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 81774 bases
Position: chrGeneScaffold_2771:4087-85860
Accession: 17103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000012595	Xpo1	PF08389.12	1.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000013936	TNPO3-201	2775	-	ENSSARP00000012595	924 (aa)	-	UPI00015819CE

Gene Model

Click here to download ENSSARG00000013893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000013893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000013893	TNPO3	98	87.514	ENSG00000064419	TNPO3	99	85.844	Homo_sapiens
ENSSARG00000013893	TNPO3	98	74.917	ENSAPOG00000018347	tnpo3	95	74.917	Acanthochromis_polyacanthus
ENSSARG00000013893	TNPO3	99	87.810	ENSAMEG00000005135	TNPO3	96	87.810	Ailuropoda_melanoleuca
ENSSARG00000013893	TNPO3	98	72.937	ENSACIG00000005897	tnpo3	99	72.937	Amphilophus_citrinellus
ENSSARG00000013893	TNPO3	98	75.028	ENSAOCG00000008264	tnpo3	95	75.028	Amphiprion_ocellaris
ENSSARG00000013893	TNPO3	98	75.028	ENSAPEG00000024300	tnpo3	99	75.028	Amphiprion_percula
ENSSARG00000013893	TNPO3	98	73.927	ENSATEG00000003197	tnpo3	95	73.927	Anabas_testudineus
ENSSARG00000013893	TNPO3	74	94.340	ENSAPLG00000005946	TNPO3	90	94.340	Anas_platyrhynchos
ENSSARG00000013893	TNPO3	83	83.551	ENSACAG00000013470	TNPO3	92	83.551	Anolis_carolinensis
ENSSARG00000013893	TNPO3	98	86.029	ENSANAG00000037940	TNPO3	95	86.029	Aotus_nancymaae
ENSSARG00000013893	TNPO3	98	74.367	ENSACLG00000005561	tnpo3	95	74.367	Astatotilapia_calliptera
ENSSARG00000013893	TNPO3	98	75.138	ENSAMXG00000016236	tnpo3	95	75.138	Astyanax_mexicanus
ENSSARG00000013893	TNPO3	98	85.699	ENSBTAG00000004992	TNPO3	99	85.277	Bos_taurus
ENSSARG00000013893	TNPO3	98	86.029	ENSCJAG00000018085	TNPO3	95	86.029	Callithrix_jacchus
ENSSARG00000013893	TNPO3	98	86.359	ENSCAFG00000001543	TNPO3	95	86.359	Canis_familiaris
ENSSARG00000013893	TNPO3	98	86.359	ENSCAFG00020022462	TNPO3	95	85.980	Canis_lupus_dingo
ENSSARG00000013893	TNPO3	98	85.809	ENSCHIG00000011721	TNPO3	95	85.809	Capra_hircus
ENSSARG00000013893	TNPO3	98	86.623	ENSTSYG00000002989	TNPO3	95	86.623	Carlito_syrichta
ENSSARG00000013893	TNPO3	71	96.774	ENSCAPG00000005843	TNPO3	91	96.774	Cavia_aperea
ENSSARG00000013893	TNPO3	98	85.919	ENSCPOG00000039784	TNPO3	95	85.919	Cavia_porcellus
ENSSARG00000013893	TNPO3	98	86.139	ENSCCAG00000033826	TNPO3	99	85.730	Cebus_capucinus
ENSSARG00000013893	TNPO3	98	86.249	ENSCATG00000030018	TNPO3	99	85.844	Cercocebus_atys
ENSSARG00000013893	TNPO3	98	85.433	ENSCLAG00000016298	TNPO3	95	85.433	Chinchilla_lanigera
ENSSARG00000013893	TNPO3	98	86.139	ENSCSAG00000009966	TNPO3	95	86.139	Chlorocebus_sabaeus
ENSSARG00000013893	TNPO3	71	87.589	ENSCHOG00000011547	TNPO3	69	87.589	Choloepus_hoffmanni
ENSSARG00000013893	TNPO3	96	82.333	ENSCPBG00000017497	TNPO3	99	82.333	Chrysemys_picta_bellii
ENSSARG00000013893	TNPO3	93	44.135	ENSCING00000005042	-	90	44.135	Ciona_intestinalis
ENSSARG00000013893	TNPO3	93	42.674	ENSCSAVG00000008623	-	84	52.653	Ciona_savignyi
ENSSARG00000013893	TNPO3	98	86.249	ENSCANG00000033070	TNPO3	99	85.844	Colobus_angolensis_palliatus
ENSSARG00000013893	TNPO3	98	86.029	ENSCGRG00001015925	Tnpo3	95	86.029	Cricetulus_griseus_chok1gshd
ENSSARG00000013893	TNPO3	98	86.029	ENSCGRG00000010379	Tnpo3	95	86.029	Cricetulus_griseus_crigri
ENSSARG00000013893	TNPO3	98	73.487	ENSCSEG00000005952	tnpo3	95	73.487	Cynoglossus_semilaevis
ENSSARG00000013893	TNPO3	98	74.421	ENSCVAG00000020285	tnpo3	95	74.421	Cyprinodon_variegatus
ENSSARG00000013893	TNPO3	98	74.367	ENSDARG00000045680	tnpo3	95	74.367	Danio_rerio
ENSSARG00000013893	TNPO3	98	86.249	ENSDNOG00000002556	TNPO3	95	86.249	Dasypus_novemcinctus
ENSSARG00000013893	TNPO3	61	83.158	ENSDORG00000002433	Tnpo3	89	83.158	Dipodomys_ordii
ENSSARG00000013893	TNPO3	92	38.960	FBgn0031456	Tnpo-SR	89	38.960	Drosophila_melanogaster
ENSSARG00000013893	TNPO3	92	87.112	ENSETEG00000002101	TNPO3	88	87.112	Echinops_telfairi
ENSSARG00000013893	TNPO3	98	62.624	ENSEBUG00000016931	tnpo3	95	62.624	Eptatretus_burgeri
ENSSARG00000013893	TNPO3	98	86.359	ENSEASG00005008677	TNPO3	95	86.359	Equus_asinus_asinus
ENSSARG00000013893	TNPO3	98	86.359	ENSECAG00000012815	TNPO3	99	85.957	Equus_caballus
ENSSARG00000013893	TNPO3	99	83.424	ENSEEUG00000005178	TNPO3	95	83.533	Erinaceus_europaeus
ENSSARG00000013893	TNPO3	98	75.248	ENSELUG00000012153	tnpo3	95	75.248	Esox_lucius
ENSSARG00000013893	TNPO3	98	86.359	ENSFCAG00000018186	TNPO3	99	85.957	Felis_catus
ENSSARG00000013893	TNPO3	98	77.898	ENSFALG00000010667	TNPO3	99	77.898	Ficedula_albicollis
ENSSARG00000013893	TNPO3	98	85.950	ENSFDAG00000019578	TNPO3	95	85.950	Fukomys_damarensis
ENSSARG00000013893	TNPO3	98	74.531	ENSFHEG00000012859	tnpo3	95	74.531	Fundulus_heteroclitus
ENSSARG00000013893	TNPO3	98	74.037	ENSGMOG00000007324	tnpo3	95	74.037	Gadus_morhua
ENSSARG00000013893	TNPO3	60	80.721	ENSGALG00000039420	TNPO3	91	80.721	Gallus_gallus
ENSSARG00000013893	TNPO3	98	73.927	ENSGACG00000000699	tnpo3	95	73.927	Gasterosteus_aculeatus
ENSSARG00000013893	TNPO3	96	82.446	ENSGAGG00000006777	TNPO3	99	82.446	Gopherus_agassizii
ENSSARG00000013893	TNPO3	98	86.249	ENSGGOG00000008339	TNPO3	99	85.844	Gorilla_gorilla
ENSSARG00000013893	TNPO3	98	74.367	ENSHBUG00000008351	tnpo3	95	74.367	Haplochromis_burtoni
ENSSARG00000013893	TNPO3	98	86.359	ENSHGLG00000004463	TNPO3	95	86.359	Heterocephalus_glaber_female
ENSSARG00000013893	TNPO3	98	86.359	ENSHGLG00100005509	TNPO3	95	86.359	Heterocephalus_glaber_male
ENSSARG00000013893	TNPO3	98	73.817	ENSHCOG00000007221	tnpo3	95	73.817	Hippocampus_comes
ENSSARG00000013893	TNPO3	98	74.147	ENSIPUG00000014979	TNPO3	95	74.147	Ictalurus_punctatus
ENSSARG00000013893	TNPO3	98	86.249	ENSSTOG00000004885	TNPO3	99	85.844	Ictidomys_tridecemlineatus
ENSSARG00000013893	TNPO3	96	80.584	ENSJJAG00000013530	Tnpo3	95	80.584	Jaculus_jaculus
ENSSARG00000013893	TNPO3	98	74.752	ENSKMAG00000010497	tnpo3	95	74.752	Kryptolebias_marmoratus
ENSSARG00000013893	TNPO3	98	72.717	ENSLBEG00000016595	tnpo3	99	72.717	Labrus_bergylta
ENSSARG00000013893	TNPO3	98	70.187	ENSLBEG00000011988	-	98	70.187	Labrus_bergylta
ENSSARG00000013893	TNPO3	77	90.345	ENSLACG00000002351	TNPO3	88	90.345	Latimeria_chalumnae
ENSSARG00000013893	TNPO3	93	88.215	ENSLOCG00000015556	tnpo3	90	88.215	Lepisosteus_oculatus
ENSSARG00000013893	TNPO3	98	85.761	ENSLAFG00000002738	TNPO3	95	85.761	Loxodonta_africana
ENSSARG00000013893	TNPO3	98	86.249	ENSMFAG00000032385	TNPO3	99	85.844	Macaca_fascicularis
ENSSARG00000013893	TNPO3	98	86.249	ENSMMUG00000004311	TNPO3	99	85.844	Macaca_mulatta
ENSSARG00000013893	TNPO3	98	86.249	ENSMNEG00000045277	TNPO3	99	85.844	Macaca_nemestrina
ENSSARG00000013893	TNPO3	98	86.249	ENSMLEG00000037881	TNPO3	99	85.844	Mandrillus_leucophaeus
ENSSARG00000013893	TNPO3	98	74.697	ENSMAMG00000021096	tnpo3	95	74.697	Mastacembelus_armatus
ENSSARG00000013893	TNPO3	98	74.367	ENSMZEG00005015084	tnpo3	95	74.367	Maylandia_zebra
ENSSARG00000013893	TNPO3	81	79.787	ENSMGAG00000002839	TNPO3	99	79.787	Meleagris_gallopavo
ENSSARG00000013893	TNPO3	98	85.919	ENSMAUG00000013463	Tnpo3	95	85.919	Mesocricetus_auratus
ENSSARG00000013893	TNPO3	54	35.106	ENSMICG00000011003	IPO13	57	31.746	Microcebus_murinus
ENSSARG00000013893	TNPO3	98	86.359	ENSMICG00000000140	TNPO3	95	86.359	Microcebus_murinus
ENSSARG00000013893	TNPO3	98	86.029	ENSMOCG00000013264	Tnpo3	95	86.029	Microtus_ochrogaster
ENSSARG00000013893	TNPO3	98	73.817	ENSMMOG00000005887	tnpo3	95	73.817	Mola_mola
ENSSARG00000013893	TNPO3	98	84.598	ENSMODG00000014700	TNPO3	95	84.598	Monodelphis_domestica
ENSSARG00000013893	TNPO3	98	74.257	ENSMALG00000006675	tnpo3	95	74.257	Monopterus_albus
ENSSARG00000013893	TNPO3	98	85.919	MGP_CAROLIEiJ_G0028176	Tnpo3	95	85.919	Mus_caroli
ENSSARG00000013893	TNPO3	98	85.919	ENSMUSG00000012535	Tnpo3	95	85.919	Mus_musculus
ENSSARG00000013893	TNPO3	98	86.029	MGP_PahariEiJ_G0021934	Tnpo3	95	86.029	Mus_pahari
ENSSARG00000013893	TNPO3	98	85.809	MGP_SPRETEiJ_G0029176	Tnpo3	95	85.809	Mus_spretus
ENSSARG00000013893	TNPO3	98	86.359	ENSMPUG00000006021	TNPO3	95	86.359	Mustela_putorius_furo
ENSSARG00000013893	TNPO3	88	99.663	ENSMLUG00000000947	TNPO3	94	99.663	Myotis_lucifugus
ENSSARG00000013893	TNPO3	98	86.249	ENSNGAG00000008722	Tnpo3	95	86.249	Nannospalax_galili
ENSSARG00000013893	TNPO3	98	74.367	ENSNBRG00000019001	tnpo3	93	77.480	Neolamprologus_brichardi
ENSSARG00000013893	TNPO3	98	87.295	ENSNLEG00000012491	TNPO3	95	87.295	Nomascus_leucogenys
ENSSARG00000013893	TNPO3	93	84.817	ENSMEUG00000002445	TNPO3	89	84.817	Notamacropus_eugenii
ENSSARG00000013893	TNPO3	73	99.306	ENSOPRG00000006163	TNPO3	70	99.306	Ochotona_princeps
ENSSARG00000013893	TNPO3	93	89.498	ENSODEG00000012826	TNPO3	92	89.498	Octodon_degus
ENSSARG00000013893	TNPO3	98	74.587	ENSONIG00000007604	tnpo3	95	74.587	Oreochromis_niloticus
ENSSARG00000013893	TNPO3	98	83.987	ENSOANG00000011451	TNPO3	99	83.568	Ornithorhynchus_anatinus
ENSSARG00000013893	TNPO3	99	86.393	ENSOCUG00000010105	TNPO3	96	86.393	Oryctolagus_cuniculus
ENSSARG00000013893	TNPO3	98	73.487	ENSORLG00000029369	tnpo3	95	73.487	Oryzias_latipes
ENSSARG00000013893	TNPO3	98	73.487	ENSORLG00020003464	tnpo3	95	73.487	Oryzias_latipes_hni
ENSSARG00000013893	TNPO3	98	73.597	ENSORLG00015002610	tnpo3	95	73.597	Oryzias_latipes_hsok
ENSSARG00000013893	TNPO3	98	73.927	ENSOMEG00000021006	tnpo3	95	73.927	Oryzias_melastigma
ENSSARG00000013893	TNPO3	98	86.139	ENSOGAG00000015340	TNPO3	95	86.139	Otolemur_garnettii
ENSSARG00000013893	TNPO3	99	87.055	ENSOARG00000004026	TNPO3	96	87.055	Ovis_aries
ENSSARG00000013893	TNPO3	98	86.249	ENSPPAG00000034975	TNPO3	99	85.844	Pan_paniscus
ENSSARG00000013893	TNPO3	98	86.359	ENSPPRG00000002050	TNPO3	95	86.359	Panthera_pardus
ENSSARG00000013893	TNPO3	98	86.359	ENSPTIG00000016167	TNPO3	95	86.359	Panthera_tigris_altaica
ENSSARG00000013893	TNPO3	98	86.249	ENSPTRG00000019676	TNPO3	99	85.844	Pan_troglodytes
ENSSARG00000013893	TNPO3	98	87.404	ENSPANG00000022226	TNPO3	95	87.404	Papio_anubis
ENSSARG00000013893	TNPO3	98	72.607	ENSPKIG00000023234	tnpo3	95	72.607	Paramormyrops_kingsleyae
ENSSARG00000013893	TNPO3	98	69.408	ENSPKIG00000008628	-	95	69.408	Paramormyrops_kingsleyae
ENSSARG00000013893	TNPO3	52	83.793	ENSPMGG00000009763	tnpo3	82	83.793	Periophthalmus_magnuspinnatus
ENSSARG00000013893	TNPO3	98	85.919	ENSPEMG00000000422	Tnpo3	95	85.919	Peromyscus_maniculatus_bairdii
ENSSARG00000013893	TNPO3	98	63.366	ENSPMAG00000008621	tnpo3	99	63.366	Petromyzon_marinus
ENSSARG00000013893	TNPO3	98	84.048	ENSPCIG00000011366	TNPO3	95	84.048	Phascolarctos_cinereus
ENSSARG00000013893	TNPO3	98	74.421	ENSPFOG00000013592	tnpo3	95	74.421	Poecilia_formosa
ENSSARG00000013893	TNPO3	98	74.421	ENSPLAG00000010188	tnpo3	95	74.421	Poecilia_latipinna
ENSSARG00000013893	TNPO3	98	74.531	ENSPMEG00000022731	tnpo3	95	74.531	Poecilia_mexicana
ENSSARG00000013893	TNPO3	98	86.249	ENSPPYG00000017990	TNPO3	95	86.249	Pongo_abelii
ENSSARG00000013893	TNPO3	99	79.741	ENSPCAG00000010158	TNPO3	96	79.741	Procavia_capensis
ENSSARG00000013893	TNPO3	87	86.957	ENSPCOG00000023901	TNPO3	91	86.957	Propithecus_coquereli
ENSSARG00000013893	TNPO3	99	84.557	ENSPVAG00000015757	TNPO3	96	84.557	Pteropus_vampyrus
ENSSARG00000013893	TNPO3	98	74.367	ENSPNYG00000002349	tnpo3	95	74.367	Pundamilia_nyererei
ENSSARG00000013893	TNPO3	98	75.798	ENSPNAG00000001142	tnpo3	95	75.798	Pygocentrus_nattereri
ENSSARG00000013893	TNPO3	98	85.809	ENSRNOG00000021758	Tnpo3	99	85.391	Rattus_norvegicus
ENSSARG00000013893	TNPO3	98	86.139	ENSRBIG00000042549	TNPO3	99	85.730	Rhinopithecus_bieti
ENSSARG00000013893	TNPO3	98	86.139	ENSRROG00000039264	TNPO3	95	86.139	Rhinopithecus_roxellana
ENSSARG00000013893	TNPO3	87	78.509	ENSSBOG00000029642	TNPO3	88	78.509	Saimiri_boliviensis_boliviensis
ENSSARG00000013893	TNPO3	98	84.708	ENSSHAG00000006837	TNPO3	99	84.708	Sarcophilus_harrisii
ENSSARG00000013893	TNPO3	98	70.174	ENSSFOG00015004256	tnpo3	95	70.174	Scleropages_formosus
ENSSARG00000013893	TNPO3	98	73.817	ENSSFOG00015001474	tnpo3	95	73.817	Scleropages_formosus
ENSSARG00000013893	TNPO3	98	74.587	ENSSMAG00000010422	tnpo3	92	74.587	Scophthalmus_maximus
ENSSARG00000013893	TNPO3	98	74.917	ENSSDUG00000004850	tnpo3	95	74.917	Seriola_dumerili
ENSSARG00000013893	TNPO3	98	74.917	ENSSLDG00000016927	tnpo3	95	74.917	Seriola_lalandi_dorsalis
ENSSARG00000013893	TNPO3	98	75.821	ENSSPUG00000007457	TNPO3	94	75.821	Sphenodon_punctatus
ENSSARG00000013893	TNPO3	78	77.824	ENSSPAG00000014209	tnpo3	93	77.824	Stegastes_partitus
ENSSARG00000013893	TNPO3	98	86.359	ENSSSCG00000016572	TNPO3	99	85.957	Sus_scrofa
ENSSARG00000013893	TNPO3	98	72.807	ENSTNIG00000003347	tnpo3	95	72.807	Tetraodon_nigroviridis
ENSSARG00000013893	TNPO3	82	99.265	ENSTBEG00000007220	TNPO3	82	99.265	Tupaia_belangeri
ENSSARG00000013893	TNPO3	90	93.103	ENSTTRG00000014618	TNPO3	86	93.103	Tursiops_truncatus
ENSSARG00000013893	TNPO3	98	86.359	ENSUAMG00000021281	TNPO3	95	86.359	Ursus_americanus
ENSSARG00000013893	TNPO3	98	86.359	ENSUMAG00000006882	TNPO3	95	86.359	Ursus_maritimus
ENSSARG00000013893	TNPO3	90	80.034	ENSVPAG00000006166	TNPO3	90	80.034	Vicugna_pacos
ENSSARG00000013893	TNPO3	98	86.359	ENSVVUG00000011004	TNPO3	95	85.950	Vulpes_vulpes
ENSSARG00000013893	TNPO3	98	71.272	ENSXETG00000015009	tnpo3	95	71.272	Xenopus_tropicalis
ENSSARG00000013893	TNPO3	98	74.201	ENSXMAG00000013062	tnpo3	95	74.201	Xiphophorus_maculatus