EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000013907 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 7977 bases
Position: chrGeneScaffold_4468:114-8090
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000012567	La	PF05383.17	5.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000013907	-	2055	-	ENSSARP00000012567	684 (aa)	-	UPI000157FC56

Gene Model

Click here to download ENSSARG00000013907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000013907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000013907	-	89	93.640	ENSG00000155506	LARP1	78	100.000	Homo_sapiens
ENSSARG00000013907	-	81	79.913	ENSAPOG00000020685	larp1	57	82.648	Acanthochromis_polyacanthus
ENSSARG00000013907	-	89	94.172	ENSAMEG00000016673	LARP1	64	93.286	Ailuropoda_melanoleuca
ENSSARG00000013907	-	88	79.783	ENSACIG00000012994	larp1	58	78.777	Amphilophus_citrinellus
ENSSARG00000013907	-	87	78.214	ENSAOCG00000007792	larp1	74	77.305	Amphiprion_ocellaris
ENSSARG00000013907	-	87	78.214	ENSAPEG00000022246	larp1	58	77.305	Amphiprion_percula
ENSSARG00000013907	-	83	84.000	ENSATEG00000013523	larp1	53	83.936	Anabas_testudineus
ENSSARG00000013907	-	78	93.519	ENSAPLG00000007559	LARP1	60	93.519	Anas_platyrhynchos
ENSSARG00000013907	-	88	83.385	ENSACAG00000004071	LARP1	69	81.231	Anolis_carolinensis
ENSSARG00000013907	-	89	93.640	ENSANAG00000029949	LARP1	64	91.411	Aotus_nancymaae
ENSSARG00000013907	-	88	78.521	ENSACLG00000015256	larp1	63	78.169	Astatotilapia_calliptera
ENSSARG00000013907	-	83	84.836	ENSAMXG00000000859	larp1	54	84.836	Astyanax_mexicanus
ENSSARG00000013907	-	88	93.252	ENSBTAG00000008443	LARP1	55	93.262	Bos_taurus
ENSSARG00000013907	-	89	93.993	ENSCJAG00000004454	LARP1	60	93.993	Callithrix_jacchus
ENSSARG00000013907	-	88	94.785	ENSCAFG00000017639	LARP1	64	93.617	Canis_familiaris
ENSSARG00000013907	-	89	94.785	ENSCAFG00020023860	LARP1	68	93.640	Canis_lupus_dingo
ENSSARG00000013907	-	88	92.908	ENSCHIG00000014414	LARP1	56	93.972	Capra_hircus
ENSSARG00000013907	-	89	93.558	ENSTSYG00000013732	LARP1	66	92.933	Carlito_syrichta
ENSSARG00000013907	-	87	85.890	ENSCAPG00000013865	LARP1	54	98.598	Cavia_aperea
ENSSARG00000013907	-	89	93.865	ENSCPOG00000003377	LARP1	64	93.286	Cavia_porcellus
ENSSARG00000013907	-	89	93.640	ENSCCAG00000025201	LARP1	60	93.640	Cebus_capucinus
ENSSARG00000013907	-	89	93.286	ENSCATG00000030675	LARP1	60	93.286	Cercocebus_atys
ENSSARG00000013907	-	89	93.865	ENSCLAG00000012755	LARP1	65	92.580	Chinchilla_lanigera
ENSSARG00000013907	-	89	93.286	ENSCSAG00000010800	LARP1	71	93.286	Chlorocebus_sabaeus
ENSSARG00000013907	-	87	85.849	ENSCHOG00000012716	LARP1	60	84.906	Choloepus_hoffmanni
ENSSARG00000013907	-	88	85.121	ENSCPBG00000002173	LARP1	61	84.429	Chrysemys_picta_bellii
ENSSARG00000013907	-	89	93.640	ENSCANG00000037418	LARP1	60	93.640	Colobus_angolensis_palliatus
ENSSARG00000013907	-	89	92.945	ENSCGRG00001016913	Larp1	57	92.580	Cricetulus_griseus_chok1gshd
ENSSARG00000013907	-	84	92.369	ENSCGRG00000009916	Larp1	62	92.339	Cricetulus_griseus_crigri
ENSSARG00000013907	-	85	81.538	ENSCSEG00000016431	larp1	55	83.534	Cynoglossus_semilaevis
ENSSARG00000013907	-	87	79.643	ENSCVAG00000022687	larp1	54	84.739	Cyprinodon_variegatus
ENSSARG00000013907	-	87	77.091	ENSDARG00000101722	larp1	60	77.091	Danio_rerio
ENSSARG00000013907	-	89	94.785	ENSDNOG00000012073	LARP1	55	92.638	Dasypus_novemcinctus
ENSSARG00000013907	-	89	92.933	ENSDORG00000002897	Larp1	65	92.933	Dipodomys_ordii
ENSSARG00000013907	-	79	98.598	ENSETEG00000020251	LARP1	61	98.598	Echinops_telfairi
ENSSARG00000013907	-	89	94.172	ENSEASG00005001070	LARP1	59	93.286	Equus_asinus_asinus
ENSSARG00000013907	-	89	93.993	ENSEEUG00000001065	LARP1	65	93.993	Erinaceus_europaeus
ENSSARG00000013907	-	87	80.364	ENSELUG00000019403	larp1	57	80.364	Esox_lucius
ENSSARG00000013907	-	89	93.865	ENSFCAG00000000592	LARP1	60	93.640	Felis_catus
ENSSARG00000013907	-	88	83.562	ENSFALG00000008335	LARP1	74	83.737	Ficedula_albicollis
ENSSARG00000013907	-	89	94.172	ENSFDAG00000021125	LARP1	64	92.933	Fukomys_damarensis
ENSSARG00000013907	-	88	84.912	ENSGALG00000040109	LARP1	62	83.916	Gallus_gallus
ENSSARG00000013907	-	88	84.775	ENSGAGG00000025113	LARP1	67	84.083	Gopherus_agassizii
ENSSARG00000013907	-	89	93.640	ENSGGOG00000006048	LARP1	60	93.640	Gorilla_gorilla
ENSSARG00000013907	-	88	78.521	ENSHBUG00000020762	larp1	70	77.660	Haplochromis_burtoni
ENSSARG00000013907	-	89	93.252	ENSHGLG00000006267	LARP1	56	92.226	Heterocephalus_glaber_female
ENSSARG00000013907	-	89	93.252	ENSHGLG00100014230	-	64	92.226	Heterocephalus_glaber_male
ENSSARG00000013907	-	86	86.466	ENSHGLG00100003395	-	56	88.980	Heterocephalus_glaber_male
ENSSARG00000013907	-	73	79.273	ENSHCOG00000010786	larp1	51	79.273	Hippocampus_comes
ENSSARG00000013907	-	85	79.771	ENSIPUG00000019105	Larp1	57	82.329	Ictalurus_punctatus
ENSSARG00000013907	-	89	94.479	ENSSTOG00000005678	LARP1	66	93.640	Ictidomys_tridecemlineatus
ENSSARG00000013907	-	89	93.286	ENSJJAG00000016950	Larp1	57	93.286	Jaculus_jaculus
ENSSARG00000013907	-	83	84.400	ENSKMAG00000018468	larp1	59	83.936	Kryptolebias_marmoratus
ENSSARG00000013907	-	87	79.636	ENSLBEG00000027172	larp1	56	78.136	Labrus_bergylta
ENSSARG00000013907	-	78	91.628	ENSLOCG00000012457	larp1	56	91.628	Lepisosteus_oculatus
ENSSARG00000013907	-	89	92.580	ENSLAFG00000008991	LARP1	56	92.580	Loxodonta_africana
ENSSARG00000013907	-	89	93.252	ENSMFAG00000031651	LARP1	60	92.933	Macaca_fascicularis
ENSSARG00000013907	-	89	93.252	ENSMMUG00000009411	LARP1	66	92.933	Macaca_mulatta
ENSSARG00000013907	-	89	93.252	ENSMNEG00000039294	LARP1	68	92.933	Macaca_nemestrina
ENSSARG00000013907	-	89	93.286	ENSMLEG00000035142	LARP1	60	93.286	Mandrillus_leucophaeus
ENSSARG00000013907	-	87	78.909	ENSMAMG00000021788	larp1	55	83.936	Mastacembelus_armatus
ENSSARG00000013907	-	88	78.521	ENSMZEG00005009345	larp1	63	78.169	Maylandia_zebra
ENSSARG00000013907	-	88	82.492	ENSMGAG00000005696	LARP1	65	81.633	Meleagris_gallopavo
ENSSARG00000013907	-	89	93.252	ENSMAUG00000001385	Larp1	57	92.226	Mesocricetus_auratus
ENSSARG00000013907	-	89	94.172	ENSMICG00000000837	LARP1	74	93.262	Microcebus_murinus
ENSSARG00000013907	-	89	93.558	ENSMOCG00000008920	Larp1	57	92.580	Microtus_ochrogaster
ENSSARG00000013907	-	89	87.986	ENSMODG00000008663	LARP1	63	87.986	Monodelphis_domestica
ENSSARG00000013907	-	87	79.286	ENSMALG00000017180	larp1	62	85.020	Monopterus_albus
ENSSARG00000013907	-	89	92.580	MGP_CAROLIEiJ_G0016383	Larp1	57	92.580	Mus_caroli
ENSSARG00000013907	-	89	92.638	ENSMUSG00000037331	Larp1	57	92.580	Mus_musculus
ENSSARG00000013907	-	89	92.945	MGP_PahariEiJ_G0017518	Larp1	57	92.933	Mus_pahari
ENSSARG00000013907	-	89	92.638	MGP_SPRETEiJ_G0017225	Larp1	57	92.580	Mus_spretus
ENSSARG00000013907	-	88	92.331	ENSMLUG00000002608	LARP1	64	90.184	Myotis_lucifugus
ENSSARG00000013907	-	89	92.226	ENSNGAG00000001098	Larp1	65	92.226	Nannospalax_galili
ENSSARG00000013907	-	83	79.681	ENSNBRG00000008963	larp1	57	79.600	Neolamprologus_brichardi
ENSSARG00000013907	-	89	93.640	ENSNLEG00000016588	LARP1	67	93.640	Nomascus_leucogenys
ENSSARG00000013907	-	89	81.625	ENSMEUG00000002957	LARP1	63	81.625	Notamacropus_eugenii
ENSSARG00000013907	-	89	93.252	ENSOPRG00000013014	LARP1	64	91.519	Ochotona_princeps
ENSSARG00000013907	-	89	93.558	ENSODEG00000010824	LARP1	64	92.580	Octodon_degus
ENSSARG00000013907	-	88	78.521	ENSONIG00000017308	larp1	56	78.169	Oreochromis_niloticus
ENSSARG00000013907	-	88	85.172	ENSOANG00000005096	LARP1	63	83.939	Ornithorhynchus_anatinus
ENSSARG00000013907	-	89	94.172	ENSOCUG00000013066	LARP1	57	92.933	Oryctolagus_cuniculus
ENSSARG00000013907	-	88	77.143	ENSORLG00000000824	larp1	67	82.996	Oryzias_latipes
ENSSARG00000013907	-	88	77.143	ENSORLG00020022241	larp1	55	83.133	Oryzias_latipes_hni
ENSSARG00000013907	-	88	76.786	ENSORLG00015007538	larp1	55	82.731	Oryzias_latipes_hsok
ENSSARG00000013907	-	83	82.800	ENSOMEG00000003134	larp1	55	82.731	Oryzias_melastigma
ENSSARG00000013907	-	89	93.558	ENSOGAG00000016750	LARP1	64	92.580	Otolemur_garnettii
ENSSARG00000013907	-	88	92.945	ENSOARG00000009893	LARP1	64	93.972	Ovis_aries
ENSSARG00000013907	-	89	93.640	ENSPPAG00000042993	LARP1	60	93.640	Pan_paniscus
ENSSARG00000013907	-	89	93.865	ENSPPRG00000009780	LARP1	60	93.640	Panthera_pardus
ENSSARG00000013907	-	89	93.865	ENSPTIG00000007013	LARP1	60	93.640	Panthera_tigris_altaica
ENSSARG00000013907	-	89	93.286	ENSPTRG00000017447	LARP1	60	93.286	Pan_troglodytes
ENSSARG00000013907	-	89	93.286	ENSPANG00000008080	LARP1	60	93.286	Papio_anubis
ENSSARG00000013907	-	78	87.442	ENSPKIG00000017153	-	54	87.442	Paramormyrops_kingsleyae
ENSSARG00000013907	-	82	85.892	ENSPKIG00000010096	larp1	54	84.000	Paramormyrops_kingsleyae
ENSSARG00000013907	-	81	83.262	ENSPMGG00000011599	larp1	57	83.262	Periophthalmus_magnuspinnatus
ENSSARG00000013907	-	89	93.252	ENSPEMG00000022523	Larp1	66	92.226	Peromyscus_maniculatus_bairdii
ENSSARG00000013907	-	88	85.276	ENSPCIG00000019242	LARP1	51	90.726	Phascolarctos_cinereus
ENSSARG00000013907	-	83	83.600	ENSPFOG00000005836	larp1	53	83.534	Poecilia_formosa
ENSSARG00000013907	-	83	83.600	ENSPLAG00000008936	larp1	54	83.534	Poecilia_latipinna
ENSSARG00000013907	-	83	83.600	ENSPMEG00000013656	larp1	53	83.534	Poecilia_mexicana
ENSSARG00000013907	-	83	83.600	ENSPREG00000005726	larp1	59	83.534	Poecilia_reticulata
ENSSARG00000013907	-	89	90.106	ENSPCAG00000006407	LARP1	64	89.046	Procavia_capensis
ENSSARG00000013907	-	89	94.479	ENSPCOG00000016949	LARP1	62	92.331	Propithecus_coquereli
ENSSARG00000013907	-	89	93.865	ENSPVAG00000002262	LARP1	55	92.580	Pteropus_vampyrus
ENSSARG00000013907	-	88	78.521	ENSPNYG00000007938	larp1	63	78.169	Pundamilia_nyererei
ENSSARG00000013907	-	80	87.330	ENSPNAG00000021427	larp1	52	87.330	Pygocentrus_nattereri
ENSSARG00000013907	-	89	93.252	ENSRNOG00000031544	Larp1	65	92.933	Rattus_norvegicus
ENSSARG00000013907	-	89	93.286	ENSRBIG00000038005	LARP1	60	93.286	Rhinopithecus_bieti
ENSSARG00000013907	-	89	93.286	ENSRROG00000034073	LARP1	68	93.286	Rhinopithecus_roxellana
ENSSARG00000013907	-	89	93.640	ENSSBOG00000019816	LARP1	66	93.640	Saimiri_boliviensis_boliviensis
ENSSARG00000013907	-	89	88.693	ENSSHAG00000011115	LARP1	64	88.693	Sarcophilus_harrisii
ENSSARG00000013907	-	87	79.487	ENSSFOG00015018058	-	53	84.337	Scleropages_formosus
ENSSARG00000013907	-	84	84.585	ENSSFOG00015020304	larp1	56	84.800	Scleropages_formosus
ENSSARG00000013907	-	78	88.837	ENSSMAG00000007468	larp1	52	88.837	Scophthalmus_maximus
ENSSARG00000013907	-	87	79.496	ENSSDUG00000000268	larp1	67	84.211	Seriola_dumerili
ENSSARG00000013907	-	87	79.348	ENSSLDG00000016505	larp1	67	84.211	Seriola_lalandi_dorsalis
ENSSARG00000013907	-	88	84.192	ENSSPUG00000012179	-	55	84.083	Sphenodon_punctatus
ENSSARG00000013907	-	88	78.648	ENSSPAG00000003910	larp1	57	77.580	Stegastes_partitus
ENSSARG00000013907	-	89	94.172	ENSSSCG00000017069	LARP1	68	93.286	Sus_scrofa
ENSSARG00000013907	-	83	87.854	ENSTGUG00000000704	LARP1	62	87.854	Taeniopygia_guttata
ENSSARG00000013907	-	88	78.445	ENSTRUG00000009470	larp1	57	76.950	Takifugu_rubripes
ENSSARG00000013907	-	79	98.598	ENSTBEG00000003381	LARP1	61	98.598	Tupaia_belangeri
ENSSARG00000013907	-	89	94.479	ENSTTRG00000015934	LARP1	64	92.580	Tursiops_truncatus
ENSSARG00000013907	-	89	93.993	ENSUAMG00000019334	LARP1	55	93.993	Ursus_americanus
ENSSARG00000013907	-	87	94.526	ENSUMAG00000002934	LARP1	61	98.598	Ursus_maritimus
ENSSARG00000013907	-	89	94.785	ENSVVUG00000004644	LARP1	68	93.640	Vulpes_vulpes
ENSSARG00000013907	-	83	85.542	ENSXETG00000008413	larp1	56	85.542	Xenopus_tropicalis
ENSSARG00000013907	-	87	76.812	ENSXCOG00000004022	larp1	61	82.591	Xiphophorus_couchianus
ENSSARG00000013907	-	83	83.200	ENSXMAG00000018780	larp1	53	83.133	Xiphophorus_maculatus