EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000013993 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Plus strand
Length: 17877 bases
Position: chrGeneScaffold_3411:4542-22418
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000012657	RTC	PF01137.21	2e-63	1	1
ENSSARP00000012657	RTC_insert	PF05189.13	2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000014002	RTCA-201	951	-	ENSSARP00000012657	316 (aa)	-	UPI00015810B7

Gene Model

Click here to download ENSSARG00000013993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000013993's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000013993	RTCA	100	85.804	ENSG00000137996	RTCA	87	85.804	Homo_sapiens
ENSSARG00000013993	RTCA	64	30.660	ENSG00000120158	RCL1	96	30.660	Homo_sapiens
ENSSARG00000013993	RTCA	100	66.562	ENSAPOG00000001345	rtca	86	66.562	Acanthochromis_polyacanthus
ENSSARG00000013993	RTCA	85	85.502	ENSAMEG00000008855	RTCA	100	85.502	Ailuropoda_melanoleuca
ENSSARG00000013993	RTCA	100	65.931	ENSACIG00000019643	rtca	87	65.931	Amphilophus_citrinellus
ENSSARG00000013993	RTCA	100	66.562	ENSAOCG00000014979	rtca	86	66.562	Amphiprion_ocellaris
ENSSARG00000013993	RTCA	100	66.562	ENSAPEG00000006945	rtca	86	66.562	Amphiprion_percula
ENSSARG00000013993	RTCA	100	66.562	ENSATEG00000006315	rtca	87	66.562	Anabas_testudineus
ENSSARG00000013993	RTCA	100	77.918	ENSAPLG00000015430	RTCA	90	77.918	Anas_platyrhynchos
ENSSARG00000013993	RTCA	100	86.435	ENSANAG00000025446	RTCA	87	86.435	Aotus_nancymaae
ENSSARG00000013993	RTCA	100	65.300	ENSACLG00000020770	rtca	86	65.300	Astatotilapia_calliptera
ENSSARG00000013993	RTCA	100	67.823	ENSAMXG00000043271	rtca	87	67.823	Astyanax_mexicanus
ENSSARG00000013993	RTCA	100	87.697	ENSBTAG00000006321	RTCA	87	87.697	Bos_taurus
ENSSARG00000013993	RTCA	100	86.120	ENSCJAG00000003398	RTCA	87	86.120	Callithrix_jacchus
ENSSARG00000013993	RTCA	100	86.751	ENSCAFG00000020010	RTCA	59	86.751	Canis_familiaris
ENSSARG00000013993	RTCA	100	86.751	ENSCAFG00020011528	RTCA	50	86.751	Canis_lupus_dingo
ENSSARG00000013993	RTCA	100	87.697	ENSCHIG00000018937	RTCA	87	87.697	Capra_hircus
ENSSARG00000013993	RTCA	100	84.543	ENSTSYG00000011305	RTCA	87	84.543	Carlito_syrichta
ENSSARG00000013993	RTCA	100	85.804	ENSCCAG00000021844	RTCA	87	85.804	Cebus_capucinus
ENSSARG00000013993	RTCA	100	85.804	ENSCATG00000019364	RTCA	100	85.437	Cercocebus_atys
ENSSARG00000013993	RTCA	100	85.489	ENSCLAG00000006125	RTCA	100	85.489	Chinchilla_lanigera
ENSSARG00000013993	RTCA	100	86.120	ENSCSAG00000001509	RTCA	87	86.120	Chlorocebus_sabaeus
ENSSARG00000013993	RTCA	100	86.435	ENSCHOG00000005211	RTCA	87	86.435	Choloepus_hoffmanni
ENSSARG00000013993	RTCA	100	79.495	ENSCPBG00000026658	RTCA	87	79.495	Chrysemys_picta_bellii
ENSSARG00000013993	RTCA	100	52.997	ENSCING00000007875	-	86	52.997	Ciona_intestinalis
ENSSARG00000013993	RTCA	100	51.420	ENSCSAVG00000007269	-	86	51.420	Ciona_savignyi
ENSSARG00000013993	RTCA	100	85.804	ENSCANG00000040106	RTCA	87	85.804	Colobus_angolensis_palliatus
ENSSARG00000013993	RTCA	85	83.643	ENSCGRG00001013163	Rtca	85	83.643	Cricetulus_griseus_chok1gshd
ENSSARG00000013993	RTCA	100	65.300	ENSCSEG00000000530	rtca	85	65.300	Cynoglossus_semilaevis
ENSSARG00000013993	RTCA	73	69.697	ENSCVAG00000021809	rtca	66	69.697	Cyprinodon_variegatus
ENSSARG00000013993	RTCA	100	68.770	ENSDARG00000002215	rtca	87	68.770	Danio_rerio
ENSSARG00000013993	RTCA	100	85.489	ENSDNOG00000000456	RTCA	87	85.489	Dasypus_novemcinctus
ENSSARG00000013993	RTCA	64	30.622	ENSDNOG00000019911	RCL1	96	30.622	Dasypus_novemcinctus
ENSSARG00000013993	RTCA	100	85.174	ENSDORG00000005448	Rtca	87	85.174	Dipodomys_ordii
ENSSARG00000013993	RTCA	99	32.588	FBgn0025630	Rtca	85	32.588	Drosophila_melanogaster
ENSSARG00000013993	RTCA	95	52.649	ENSEBUG00000008556	rtca	81	52.649	Eptatretus_burgeri
ENSSARG00000013993	RTCA	100	86.751	ENSEASG00005015926	RTCA	87	86.751	Equus_asinus_asinus
ENSSARG00000013993	RTCA	100	86.751	ENSECAG00000019831	RTCA	87	86.751	Equus_caballus
ENSSARG00000013993	RTCA	90	79.225	ENSEEUG00000001165	RTCA	82	79.225	Erinaceus_europaeus
ENSSARG00000013993	RTCA	100	67.823	ENSELUG00000003741	rtca	87	67.823	Esox_lucius
ENSSARG00000013993	RTCA	100	86.435	ENSFCAG00000024460	RTCA	87	86.435	Felis_catus
ENSSARG00000013993	RTCA	90	78.521	ENSFALG00000002443	RTCA	76	78.521	Ficedula_albicollis
ENSSARG00000013993	RTCA	100	86.120	ENSFDAG00000012070	-	87	86.120	Fukomys_damarensis
ENSSARG00000013993	RTCA	98	67.732	ENSFDAG00000016084	-	85	67.732	Fukomys_damarensis
ENSSARG00000013993	RTCA	73	60.759	ENSFHEG00000002868	rtca	98	61.304	Fundulus_heteroclitus
ENSSARG00000013993	RTCA	100	64.353	ENSGMOG00000013264	rtca	87	64.353	Gadus_morhua
ENSSARG00000013993	RTCA	100	78.549	ENSGALG00000005277	RTCA	87	78.549	Gallus_gallus
ENSSARG00000013993	RTCA	100	67.508	ENSGAFG00000011853	rtca	86	67.508	Gambusia_affinis
ENSSARG00000013993	RTCA	100	64.669	ENSGACG00000013497	rtca	87	64.669	Gasterosteus_aculeatus
ENSSARG00000013993	RTCA	77	79.508	ENSGAGG00000023306	RTCA	83	79.508	Gopherus_agassizii
ENSSARG00000013993	RTCA	100	85.804	ENSGGOG00000009546	-	100	85.437	Gorilla_gorilla
ENSSARG00000013993	RTCA	100	85.174	ENSGGOG00000044018	-	87	85.174	Gorilla_gorilla
ENSSARG00000013993	RTCA	100	64.984	ENSHBUG00000002114	rtca	86	64.984	Haplochromis_burtoni
ENSSARG00000013993	RTCA	100	83.912	ENSHGLG00000002617	RTCA	87	83.912	Heterocephalus_glaber_female
ENSSARG00000013993	RTCA	100	83.912	ENSHGLG00100006056	RTCA	87	83.912	Heterocephalus_glaber_male
ENSSARG00000013993	RTCA	100	61.199	ENSHCOG00000020628	rtca	77	61.199	Hippocampus_comes
ENSSARG00000013993	RTCA	100	68.139	ENSIPUG00000024803	rtca	87	68.139	Ictalurus_punctatus
ENSSARG00000013993	RTCA	100	86.751	ENSSTOG00000013528	-	93	86.751	Ictidomys_tridecemlineatus
ENSSARG00000013993	RTCA	100	77.603	ENSSTOG00000033099	-	86	77.603	Ictidomys_tridecemlineatus
ENSSARG00000013993	RTCA	100	60.883	ENSJJAG00000016178	Rtca	83	60.252	Jaculus_jaculus
ENSSARG00000013993	RTCA	100	66.562	ENSKMAG00000006651	rtca	86	66.562	Kryptolebias_marmoratus
ENSSARG00000013993	RTCA	100	64.984	ENSLBEG00000002448	-	98	64.984	Labrus_bergylta
ENSSARG00000013993	RTCA	100	64.984	ENSLBEG00000028971	rtca	87	64.984	Labrus_bergylta
ENSSARG00000013993	RTCA	100	74.763	ENSLACG00000013666	RTCA	87	74.763	Latimeria_chalumnae
ENSSARG00000013993	RTCA	100	69.085	ENSLOCG00000000093	rtca	86	69.085	Lepisosteus_oculatus
ENSSARG00000013993	RTCA	100	85.489	ENSLAFG00000001473	RTCA	87	85.489	Loxodonta_africana
ENSSARG00000013993	RTCA	100	86.120	ENSMFAG00000034132	RTCA	87	86.120	Macaca_fascicularis
ENSSARG00000013993	RTCA	100	85.489	ENSMMUG00000019105	RTCA	87	85.489	Macaca_mulatta
ENSSARG00000013993	RTCA	97	85.761	ENSMNEG00000037163	RTCA	100	85.761	Macaca_nemestrina
ENSSARG00000013993	RTCA	100	67.722	ENSMLEG00000042151	RTCA	84	67.722	Mandrillus_leucophaeus
ENSSARG00000013993	RTCA	100	68.454	ENSMAMG00000016536	rtca	87	68.454	Mastacembelus_armatus
ENSSARG00000013993	RTCA	100	65.300	ENSMZEG00005017945	rtca	86	65.300	Maylandia_zebra
ENSSARG00000013993	RTCA	100	78.549	ENSMGAG00000006892	RTCA	99	78.549	Meleagris_gallopavo
ENSSARG00000013993	RTCA	100	84.543	ENSMAUG00000008488	Rtca	87	84.543	Mesocricetus_auratus
ENSSARG00000013993	RTCA	97	87.055	ENSMICG00000008643	RTCA	100	87.055	Microcebus_murinus
ENSSARG00000013993	RTCA	100	84.543	ENSMOCG00000016660	Rtca	87	84.543	Microtus_ochrogaster
ENSSARG00000013993	RTCA	97	65.696	ENSMMOG00000007750	rtca	100	65.696	Mola_mola
ENSSARG00000013993	RTCA	100	83.912	ENSMODG00000003557	RTCA	87	83.912	Monodelphis_domestica
ENSSARG00000013993	RTCA	100	67.508	ENSMALG00000020844	rtca	87	67.508	Monopterus_albus
ENSSARG00000013993	RTCA	100	83.596	MGP_CAROLIEiJ_G0025565	Rtca	92	86.260	Mus_caroli
ENSSARG00000013993	RTCA	100	82.965	ENSMUSG00000000339	Rtca	92	86.260	Mus_musculus
ENSSARG00000013993	RTCA	100	83.281	MGP_PahariEiJ_G0027011	Rtca	92	85.496	Mus_pahari
ENSSARG00000013993	RTCA	100	83.281	MGP_SPRETEiJ_G0026515	Rtca	92	85.496	Mus_spretus
ENSSARG00000013993	RTCA	100	87.066	ENSMPUG00000012119	RTCA	87	87.066	Mustela_putorius_furo
ENSSARG00000013993	RTCA	100	83.281	ENSMLUG00000009922	RTCA	87	83.281	Myotis_lucifugus
ENSSARG00000013993	RTCA	100	85.174	ENSNGAG00000011540	Rtca	92	85.174	Nannospalax_galili
ENSSARG00000013993	RTCA	100	65.615	ENSNBRG00000003062	rtca	86	65.615	Neolamprologus_brichardi
ENSSARG00000013993	RTCA	100	85.804	ENSNLEG00000031426	RTCA	87	85.804	Nomascus_leucogenys
ENSSARG00000013993	RTCA	85	80.669	ENSOPRG00000012092	RTCA	71	80.669	Ochotona_princeps
ENSSARG00000013993	RTCA	100	85.804	ENSODEG00000006990	RTCA	87	85.804	Octodon_degus
ENSSARG00000013993	RTCA	100	65.615	ENSONIG00000007753	rtca	86	65.615	Oreochromis_niloticus
ENSSARG00000013993	RTCA	100	82.650	ENSOANG00000012055	RTCA	98	82.650	Ornithorhynchus_anatinus
ENSSARG00000013993	RTCA	100	87.697	ENSOCUG00000014247	RTCA	87	87.697	Oryctolagus_cuniculus
ENSSARG00000013993	RTCA	100	66.562	ENSORLG00000013605	rtca	87	66.562	Oryzias_latipes
ENSSARG00000013993	RTCA	100	66.562	ENSORLG00020001904	rtca	87	66.562	Oryzias_latipes_hni
ENSSARG00000013993	RTCA	100	66.562	ENSORLG00015021064	rtca	87	66.562	Oryzias_latipes_hsok
ENSSARG00000013993	RTCA	100	67.192	ENSOMEG00000000756	rtca	87	67.192	Oryzias_melastigma
ENSSARG00000013993	RTCA	98	77.492	ENSOGAG00000005627	RTCA	85	77.492	Otolemur_garnettii
ENSSARG00000013993	RTCA	100	87.066	ENSOARG00000018122	RTCA	99	87.066	Ovis_aries
ENSSARG00000013993	RTCA	100	86.435	ENSPPAG00000035119	RTCA	100	86.084	Pan_paniscus
ENSSARG00000013993	RTCA	100	86.120	ENSPPRG00000000350	RTCA	87	86.120	Panthera_pardus
ENSSARG00000013993	RTCA	64	30.189	ENSPTIG00000019031	RCL1	96	30.189	Panthera_tigris_altaica
ENSSARG00000013993	RTCA	100	86.120	ENSPTIG00000012816	RTCA	87	86.120	Panthera_tigris_altaica
ENSSARG00000013993	RTCA	100	85.804	ENSPTRG00000001004	RTCA	100	85.437	Pan_troglodytes
ENSSARG00000013993	RTCA	100	86.120	ENSPANG00000000346	RTCA	87	86.120	Papio_anubis
ENSSARG00000013993	RTCA	100	68.770	ENSPKIG00000001653	rtca	87	68.770	Paramormyrops_kingsleyae
ENSSARG00000013993	RTCA	100	79.811	ENSPSIG00000011408	RTCA	87	79.811	Pelodiscus_sinensis
ENSSARG00000013993	RTCA	100	84.227	ENSPEMG00000018582	Rtca	87	84.227	Peromyscus_maniculatus_bairdii
ENSSARG00000013993	RTCA	100	54.829	ENSPMAG00000009110	rtca	87	54.829	Petromyzon_marinus
ENSSARG00000013993	RTCA	100	83.281	ENSPCIG00000007684	RTCA	87	83.281	Phascolarctos_cinereus
ENSSARG00000013993	RTCA	100	67.823	ENSPFOG00000004824	rtca	86	67.823	Poecilia_formosa
ENSSARG00000013993	RTCA	100	67.823	ENSPLAG00000011753	rtca	86	67.823	Poecilia_latipinna
ENSSARG00000013993	RTCA	100	67.823	ENSPMEG00000020469	rtca	86	67.823	Poecilia_mexicana
ENSSARG00000013993	RTCA	100	68.770	ENSPREG00000001365	rtca	86	68.770	Poecilia_reticulata
ENSSARG00000013993	RTCA	100	85.804	ENSPPYG00000001115	RTCA	87	85.804	Pongo_abelii
ENSSARG00000013993	RTCA	100	82.650	ENSPCAG00000005076	RTCA	87	82.650	Procavia_capensis
ENSSARG00000013993	RTCA	100	87.382	ENSPCOG00000005603	RTCA	87	87.382	Propithecus_coquereli
ENSSARG00000013993	RTCA	100	85.489	ENSPVAG00000009478	RTCA	84	85.489	Pteropus_vampyrus
ENSSARG00000013993	RTCA	100	65.300	ENSPNYG00000004722	rtca	86	65.300	Pundamilia_nyererei
ENSSARG00000013993	RTCA	100	68.139	ENSPNAG00000022270	rtca	87	68.139	Pygocentrus_nattereri
ENSSARG00000013993	RTCA	100	83.281	ENSRNOG00000014575	Rtca	87	83.281	Rattus_norvegicus
ENSSARG00000013993	RTCA	100	85.489	ENSRBIG00000041180	RTCA	100	85.113	Rhinopithecus_bieti
ENSSARG00000013993	RTCA	100	85.489	ENSRROG00000024929	RTCA	87	85.489	Rhinopithecus_roxellana
ENSSARG00000013993	RTCA	100	86.120	ENSSBOG00000028626	RTCA	87	86.120	Saimiri_boliviensis_boliviensis
ENSSARG00000013993	RTCA	100	84.543	ENSSHAG00000001758	RTCA	87	84.543	Sarcophilus_harrisii
ENSSARG00000013993	RTCA	100	66.246	ENSSMAG00000014680	rtca	85	66.246	Scophthalmus_maximus
ENSSARG00000013993	RTCA	100	66.877	ENSSDUG00000015585	rtca	85	66.877	Seriola_dumerili
ENSSARG00000013993	RTCA	100	66.877	ENSSLDG00000018985	rtca	86	66.877	Seriola_lalandi_dorsalis
ENSSARG00000013993	RTCA	100	66.562	ENSSPAG00000011938	rtca	86	66.562	Stegastes_partitus
ENSSARG00000013993	RTCA	100	86.751	ENSSSCG00000006865	RTCA	87	86.751	Sus_scrofa
ENSSARG00000013993	RTCA	100	78.233	ENSTGUG00000005154	RTCA	87	78.233	Taeniopygia_guttata
ENSSARG00000013993	RTCA	100	66.246	ENSTRUG00000008799	rtca	87	66.246	Takifugu_rubripes
ENSSARG00000013993	RTCA	100	65.931	ENSTNIG00000004725	rtca	87	65.931	Tetraodon_nigroviridis
ENSSARG00000013993	RTCA	53	95.833	ENSTBEG00000000943	RTCA	66	61.345	Tupaia_belangeri
ENSSARG00000013993	RTCA	100	86.120	ENSTTRG00000015327	RTCA	84	86.120	Tursiops_truncatus
ENSSARG00000013993	RTCA	93	83.333	ENSUAMG00000017265	RTCA	83	83.333	Ursus_americanus
ENSSARG00000013993	RTCA	100	86.120	ENSUMAG00000007881	RTCA	87	86.120	Ursus_maritimus
ENSSARG00000013993	RTCA	100	76.972	ENSVPAG00000001039	RTCA	84	76.972	Vicugna_pacos
ENSSARG00000013993	RTCA	100	86.435	ENSVVUG00000022041	RTCA	58	86.435	Vulpes_vulpes
ENSSARG00000013993	RTCA	99	61.875	ENSXETG00000031661	RTCA	89	59.177	Xenopus_tropicalis
ENSSARG00000013993	RTCA	100	57.413	ENSXCOG00000008002	rtca	86	57.413	Xiphophorus_couchianus
ENSSARG00000013993	RTCA	100	67.823	ENSXMAG00000005482	rtca	86	67.823	Xiphophorus_maculatus