EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSARG00000014339 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Sorex_araneus
Status: putative
Strand: Minus strand
Length: 126244 bases
Position: chrGeneScaffold_3600:7993-134236
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSARP00000012977	R3H	PF01424.22	2.4e-05	1	1
ENSSARP00000012977	RNA_bind	PF08675.11	9e-27	1	1
ENSSARP00000012977	CAF1	PF04857.20	2.8e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSART00000014349	PARN-201	1737	-	ENSSARP00000012977	578 (aa)	-	UPI0001581A26

Gene Model

Click here to download ENSSARG00000014339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSARG00000014339's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSARG00000014339	PARN	100	80.517	ENSG00000140694	PARN	99	86.411	Homo_sapiens
ENSSARG00000014339	PARN	100	80.690	ENSAMEG00000011208	PARN	91	80.690	Ailuropoda_melanoleuca
ENSSARG00000014339	PARN	75	77.011	ENSACIG00000000619	parn	67	77.011	Amphilophus_citrinellus
ENSSARG00000014339	PARN	75	80.000	ENSAOCG00000003465	parn	63	80.000	Amphiprion_ocellaris
ENSSARG00000014339	PARN	75	79.446	ENSAPEG00000010661	parn	83	79.446	Amphiprion_percula
ENSSARG00000014339	PARN	75	81.609	ENSATEG00000004661	parn	63	81.609	Anabas_testudineus
ENSSARG00000014339	PARN	100	74.048	ENSAPLG00000013914	PARN	91	74.048	Anas_platyrhynchos
ENSSARG00000014339	PARN	75	86.897	ENSACAG00000004973	PARN	67	86.897	Anolis_carolinensis
ENSSARG00000014339	PARN	100	80.000	ENSANAG00000031516	PARN	91	80.000	Aotus_nancymaae
ENSSARG00000014339	PARN	75	81.149	ENSACLG00000004742	parn	64	81.149	Astatotilapia_calliptera
ENSSARG00000014339	PARN	75	79.493	ENSAMXG00000012390	parn	67	79.493	Astyanax_mexicanus
ENSSARG00000014339	PARN	99	80.763	ENSBTAG00000018097	PARN	100	80.763	Bos_taurus
ENSSARG00000014339	PARN	100	80.345	ENSCJAG00000015866	PARN	91	80.345	Callithrix_jacchus
ENSSARG00000014339	PARN	100	80.829	ENSCAFG00000018795	PARN	91	80.829	Canis_familiaris
ENSSARG00000014339	PARN	100	80.656	ENSCAFG00020024126	PARN	91	80.656	Canis_lupus_dingo
ENSSARG00000014339	PARN	100	81.174	ENSCHIG00000018143	PARN	91	81.174	Capra_hircus
ENSSARG00000014339	PARN	72	62.998	ENSCAPG00000007984	PARN	68	62.998	Cavia_aperea
ENSSARG00000014339	PARN	100	77.029	ENSCPOG00000002263	PARN	81	88.018	Cavia_porcellus
ENSSARG00000014339	PARN	100	80.345	ENSCCAG00000030367	PARN	91	80.345	Cebus_capucinus
ENSSARG00000014339	PARN	89	95.392	ENSCATG00000041368	PARN	91	94.763	Cercocebus_atys
ENSSARG00000014339	PARN	100	77.163	ENSCLAG00000015406	PARN	82	85.977	Chinchilla_lanigera
ENSSARG00000014339	PARN	100	80.862	ENSCSAG00000008142	PARN	91	80.862	Chlorocebus_sabaeus
ENSSARG00000014339	PARN	80	80.789	ENSCHOG00000007014	PARN	75	80.789	Choloepus_hoffmanni
ENSSARG00000014339	PARN	97	74.600	ENSCPBG00000006609	PARN	97	74.600	Chrysemys_picta_bellii
ENSSARG00000014339	PARN	74	45.312	ENSCING00000010142	-	84	45.312	Ciona_intestinalis
ENSSARG00000014339	PARN	100	67.780	ENSCANG00000028849	-	92	66.192	Colobus_angolensis_palliatus
ENSSARG00000014339	PARN	71	30.140	ENSCGRG00001007470	-	74	30.140	Cricetulus_griseus_chok1gshd
ENSSARG00000014339	PARN	89	89.862	ENSCGRG00001012096	Parn	81	89.862	Cricetulus_griseus_chok1gshd
ENSSARG00000014339	PARN	89	89.862	ENSCGRG00000004939	Parn	81	89.862	Cricetulus_griseus_crigri
ENSSARG00000014339	PARN	71	30.140	ENSCGRG00000010221	-	74	30.140	Cricetulus_griseus_crigri
ENSSARG00000014339	PARN	75	77.011	ENSCSEG00000002064	parn	63	77.011	Cynoglossus_semilaevis
ENSSARG00000014339	PARN	75	79.080	ENSCVAG00000014848	parn	64	79.080	Cyprinodon_variegatus
ENSSARG00000014339	PARN	75	75.576	ENSDARG00000102634	parn	67	75.576	Danio_rerio
ENSSARG00000014339	PARN	100	79.275	ENSDNOG00000000833	PARN	77	95.622	Dasypus_novemcinctus
ENSSARG00000014339	PARN	71	93.069	ENSETEG00000014828	-	59	93.069	Echinops_telfairi
ENSSARG00000014339	PARN	89	94.931	ENSEASG00005011400	PARN	81	94.931	Equus_asinus_asinus
ENSSARG00000014339	PARN	89	94.700	ENSECAG00000017792	PARN	81	94.700	Equus_caballus
ENSSARG00000014339	PARN	85	79.375	ENSEEUG00000010370	PARN	77	79.375	Erinaceus_europaeus
ENSSARG00000014339	PARN	75	79.493	ENSELUG00000013139	parn	57	79.493	Esox_lucius
ENSSARG00000014339	PARN	100	80.656	ENSFCAG00000044961	PARN	91	80.656	Felis_catus
ENSSARG00000014339	PARN	100	72.414	ENSFALG00000003911	PARN	90	72.414	Ficedula_albicollis
ENSSARG00000014339	PARN	57	30.473	ENSFALG00000012081	PNLDC1	62	30.473	Ficedula_albicollis
ENSSARG00000014339	PARN	88	90.553	ENSFDAG00000009234	PARN	81	90.553	Fukomys_damarensis
ENSSARG00000014339	PARN	75	71.494	ENSFHEG00000013738	parn	67	71.171	Fundulus_heteroclitus
ENSSARG00000014339	PARN	75	78.161	ENSGMOG00000003231	parn	79	78.161	Gadus_morhua
ENSSARG00000014339	PARN	100	72.664	ENSGALG00000003091	PARN	91	72.664	Gallus_gallus
ENSSARG00000014339	PARN	75	80.000	ENSGAFG00000011061	parn	63	80.000	Gambusia_affinis
ENSSARG00000014339	PARN	75	79.080	ENSGACG00000019501	parn	70	79.080	Gasterosteus_aculeatus
ENSSARG00000014339	PARN	56	61.890	ENSGAGG00000023281	PARN	83	61.890	Gopherus_agassizii
ENSSARG00000014339	PARN	97	80.392	ENSGGOG00000025224	PARN	92	78.977	Gorilla_gorilla
ENSSARG00000014339	PARN	75	81.149	ENSHBUG00000017906	parn	73	78.539	Haplochromis_burtoni
ENSSARG00000014339	PARN	100	76.298	ENSHGLG00000010886	PARN	91	76.298	Heterocephalus_glaber_female
ENSSARG00000014339	PARN	100	76.298	ENSHGLG00100014659	PARN	91	76.298	Heterocephalus_glaber_male
ENSSARG00000014339	PARN	75	73.793	ENSHCOG00000008683	parn	74	73.793	Hippocampus_comes
ENSSARG00000014339	PARN	75	65.207	ENSIPUG00000012401	parn	63	65.207	Ictalurus_punctatus
ENSSARG00000014339	PARN	100	79.447	ENSSTOG00000007519	PARN	91	79.447	Ictidomys_tridecemlineatus
ENSSARG00000014339	PARN	89	91.935	ENSJJAG00000023049	Parn	82	91.935	Jaculus_jaculus
ENSSARG00000014339	PARN	75	80.000	ENSKMAG00000009462	parn	64	80.000	Kryptolebias_marmoratus
ENSSARG00000014339	PARN	75	79.770	ENSLBEG00000009167	parn	68	79.770	Labrus_bergylta
ENSSARG00000014339	PARN	75	82.949	ENSLACG00000004207	PARN	86	80.441	Latimeria_chalumnae
ENSSARG00000014339	PARN	75	82.488	ENSLOCG00000000715	parn	64	82.488	Lepisosteus_oculatus
ENSSARG00000014339	PARN	88	95.161	ENSLAFG00000015036	PARN	81	95.161	Loxodonta_africana
ENSSARG00000014339	PARN	51	30.164	ENSLAFG00000030189	PNLDC1	80	30.164	Loxodonta_africana
ENSSARG00000014339	PARN	99	80.796	ENSMFAG00000044852	PARN	100	80.796	Macaca_fascicularis
ENSSARG00000014339	PARN	100	80.690	ENSMMUG00000018849	PARN	91	80.690	Macaca_mulatta
ENSSARG00000014339	PARN	100	80.862	ENSMNEG00000045108	PARN	91	80.862	Macaca_nemestrina
ENSSARG00000014339	PARN	100	80.690	ENSMLEG00000031743	PARN	100	80.623	Mandrillus_leucophaeus
ENSSARG00000014339	PARN	75	79.310	ENSMAMG00000006939	parn	63	79.310	Mastacembelus_armatus
ENSSARG00000014339	PARN	75	81.149	ENSMZEG00005013590	parn	74	78.261	Maylandia_zebra
ENSSARG00000014339	PARN	100	72.664	ENSMGAG00000001004	PARN	91	72.664	Meleagris_gallopavo
ENSSARG00000014339	PARN	89	85.327	ENSMAUG00000008025	Parn	84	85.327	Mesocricetus_auratus
ENSSARG00000014339	PARN	100	79.793	ENSMICG00000016053	PARN	91	79.793	Microcebus_murinus
ENSSARG00000014339	PARN	75	89.171	ENSMOCG00000022211	Parn	88	89.171	Microtus_ochrogaster
ENSSARG00000014339	PARN	75	76.782	ENSMMOG00000011333	parn	70	76.782	Mola_mola
ENSSARG00000014339	PARN	75	93.548	ENSMODG00000004915	PARN	87	93.548	Monodelphis_domestica
ENSSARG00000014339	PARN	75	80.000	ENSMALG00000019426	parn	74	80.000	Monopterus_albus
ENSSARG00000014339	PARN	89	89.171	MGP_CAROLIEiJ_G0020466	Parn	81	89.171	Mus_caroli
ENSSARG00000014339	PARN	89	89.401	ENSMUSG00000022685	Parn	81	89.401	Mus_musculus
ENSSARG00000014339	PARN	89	88.940	MGP_PahariEiJ_G0016172	Parn	81	88.940	Mus_pahari
ENSSARG00000014339	PARN	89	89.171	MGP_SPRETEiJ_G0021361	Parn	81	89.171	Mus_spretus
ENSSARG00000014339	PARN	100	81.865	ENSMPUG00000014464	PARN	91	81.865	Mustela_putorius_furo
ENSSARG00000014339	PARN	75	92.874	ENSMLUG00000005414	PARN	88	92.874	Myotis_lucifugus
ENSSARG00000014339	PARN	75	77.701	ENSNBRG00000006805	parn	73	77.701	Neolamprologus_brichardi
ENSSARG00000014339	PARN	100	80.172	ENSNLEG00000010241	PARN	91	80.172	Nomascus_leucogenys
ENSSARG00000014339	PARN	78	65.909	ENSMEUG00000008178	-	65	63.570	Notamacropus_eugenii
ENSSARG00000014339	PARN	100	72.712	ENSOPRG00000012187	PARN	92	72.884	Ochotona_princeps
ENSSARG00000014339	PARN	88	82.151	ENSODEG00000001617	PARN	81	82.151	Octodon_degus
ENSSARG00000014339	PARN	75	81.379	ENSONIG00000000151	parn	67	81.379	Oreochromis_niloticus
ENSSARG00000014339	PARN	65	66.578	ENSOANG00000020155	-	97	67.632	Ornithorhynchus_anatinus
ENSSARG00000014339	PARN	100	78.929	ENSOCUG00000000322	PARN	91	78.929	Oryctolagus_cuniculus
ENSSARG00000014339	PARN	75	78.621	ENSORLG00020010313	parn	65	78.621	Oryzias_latipes_hni
ENSSARG00000014339	PARN	75	78.391	ENSORLG00015000300	parn	65	78.391	Oryzias_latipes_hsok
ENSSARG00000014339	PARN	75	78.851	ENSOMEG00000019555	parn	64	78.851	Oryzias_melastigma
ENSSARG00000014339	PARN	75	91.475	ENSOGAG00000014626	PARN	88	91.475	Otolemur_garnettii
ENSSARG00000014339	PARN	75	95.402	ENSOARG00000007574	PARN	88	95.402	Ovis_aries
ENSSARG00000014339	PARN	100	80.172	ENSPPAG00000031438	PARN	91	80.172	Pan_paniscus
ENSSARG00000014339	PARN	100	80.484	ENSPPRG00000018583	PARN	91	80.484	Panthera_pardus
ENSSARG00000014339	PARN	100	80.656	ENSPTIG00000012135	PARN	91	80.656	Panthera_tigris_altaica
ENSSARG00000014339	PARN	100	80.172	ENSPTRG00000007792	PARN	91	80.172	Pan_troglodytes
ENSSARG00000014339	PARN	100	77.241	ENSPANG00000020099	PARN	91	77.069	Papio_anubis
ENSSARG00000014339	PARN	75	79.032	ENSPKIG00000022807	parn	69	73.409	Paramormyrops_kingsleyae
ENSSARG00000014339	PARN	99	73.402	ENSPSIG00000014804	PARN	100	73.402	Pelodiscus_sinensis
ENSSARG00000014339	PARN	75	76.092	ENSPMGG00000014431	parn	60	76.552	Periophthalmus_magnuspinnatus
ENSSARG00000014339	PARN	89	87.097	ENSPEMG00000018439	Parn	81	87.097	Peromyscus_maniculatus_bairdii
ENSSARG00000014339	PARN	75	67.661	ENSPMAG00000003956	parn	83	67.661	Petromyzon_marinus
ENSSARG00000014339	PARN	63	84.890	ENSPCIG00000001259	PARN	78	84.615	Phascolarctos_cinereus
ENSSARG00000014339	PARN	75	79.310	ENSPFOG00000012823	parn	64	79.310	Poecilia_formosa
ENSSARG00000014339	PARN	75	79.540	ENSPLAG00000006395	parn	64	79.540	Poecilia_latipinna
ENSSARG00000014339	PARN	75	79.540	ENSPMEG00000007711	parn	64	79.540	Poecilia_mexicana
ENSSARG00000014339	PARN	75	79.310	ENSPREG00000000147	parn	64	79.310	Poecilia_reticulata
ENSSARG00000014339	PARN	100	80.517	ENSPPYG00000007123	PARN	90	80.517	Pongo_abelii
ENSSARG00000014339	PARN	85	87.042	ENSPCAG00000001741	PARN	81	87.042	Procavia_capensis
ENSSARG00000014339	PARN	100	77.202	ENSPCOG00000019292	PARN	91	77.202	Propithecus_coquereli
ENSSARG00000014339	PARN	100	76.857	ENSPVAG00000002547	PARN	92	76.857	Pteropus_vampyrus
ENSSARG00000014339	PARN	75	81.149	ENSPNYG00000006835	parn	73	75.114	Pundamilia_nyererei
ENSSARG00000014339	PARN	75	79.493	ENSPNAG00000018905	parn	72	79.493	Pygocentrus_nattereri
ENSSARG00000014339	PARN	89	90.092	ENSRNOG00000002912	Parn	98	89.899	Rattus_norvegicus
ENSSARG00000014339	PARN	57	69.970	ENSRBIG00000018726	PARN	100	69.970	Rhinopithecus_bieti
ENSSARG00000014339	PARN	57	69.970	ENSRROG00000011162	-	100	69.970	Rhinopithecus_roxellana
ENSSARG00000014339	PARN	100	78.621	ENSSBOG00000034726	PARN	91	78.621	Saimiri_boliviensis_boliviensis
ENSSARG00000014339	PARN	63	92.857	ENSSHAG00000008493	PARN	81	92.857	Sarcophilus_harrisii
ENSSARG00000014339	PARN	75	81.106	ENSSFOG00015014165	parn	72	79.032	Scleropages_formosus
ENSSARG00000014339	PARN	75	77.241	ENSSMAG00000000685	parn	71	71.202	Scophthalmus_maximus
ENSSARG00000014339	PARN	75	80.460	ENSSDUG00000014555	parn	63	80.460	Seriola_dumerili
ENSSARG00000014339	PARN	100	73.402	ENSSPUG00000007719	PARN	91	73.402	Sphenodon_punctatus
ENSSARG00000014339	PARN	75	81.609	ENSSPAG00000007095	parn	64	81.609	Stegastes_partitus
ENSSARG00000014339	PARN	100	81.002	ENSSSCG00000007878	PARN	81	81.002	Sus_scrofa
ENSSARG00000014339	PARN	100	72.931	ENSTGUG00000004971	PARN	91	72.931	Taeniopygia_guttata
ENSSARG00000014339	PARN	58	30.117	ENSTGUG00000011418	PNLDC1	65	30.117	Taeniopygia_guttata
ENSSARG00000014339	PARN	75	78.851	ENSTNIG00000008252	parn	69	78.851	Tetraodon_nigroviridis
ENSSARG00000014339	PARN	100	65.976	ENSTBEG00000010407	PARN	100	65.976	Tupaia_belangeri
ENSSARG00000014339	PARN	100	85.665	ENSTTRG00000002843	PARN	92	85.665	Tursiops_truncatus
ENSSARG00000014339	PARN	75	82.448	ENSUAMG00000008283	PARN	94	78.391	Ursus_americanus
ENSSARG00000014339	PARN	100	81.002	ENSUMAG00000004527	PARN	91	81.002	Ursus_maritimus
ENSSARG00000014339	PARN	97	77.540	ENSVPAG00000008968	PARN	91	77.540	Vicugna_pacos
ENSSARG00000014339	PARN	100	80.829	ENSVVUG00000019509	PARN	91	80.829	Vulpes_vulpes
ENSSARG00000014339	PARN	100	67.010	ENSXETG00000010994	parn	82	82.258	Xenopus_tropicalis
ENSSARG00000014339	PARN	75	74.541	ENSXCOG00000015990	parn	73	74.541	Xiphophorus_couchianus
ENSSARG00000014339	PARN	75	79.310	ENSXMAG00000014783	parn	64	79.310	Xiphophorus_maculatus