EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000001955 (Gene tree)
Gene ID: 101053165
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 70900 bases
Position: chrJH378221.1:1912296-1983195
Accession: 16816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000000602	ResIII	PF04851.15	4.7e-08	1	1
ENSSBOP00000000599	ResIII	PF04851.15	4.7e-08	1	1
ENSSBOP00000000582	ResIII	PF04851.15	1.2e-07	1	1
ENSSBOP00000000571	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000002993	CHD5-203	8997	XM_010350281	ENSSBOP00000000599	1684 (aa)	XP_010348583	A0A2K6RZN2
ENSSBOT00000003012	CHD5-204	8882	XM_010350282	ENSSBOP00000000602	1681 (aa)	XP_010348584	A0A2K6RZP7
ENSSBOT00000002784	CHD5-201	5727	-	ENSSBOP00000000571	1908 (aa)	-	A0A2K6RZL6
ENSSBOT00000002883	CHD5-202	5718	-	ENSSBOP00000000582	1905 (aa)	-	A0A2K6RZM2

Gene Model

Click here to download ENSSBOG00000001955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000001955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000001955	CHD5	98	72.299	ENSSBOG00000020719	CHD3	97	65.871
ENSSBOG00000001955	CHD5	98	72.678	ENSSBOG00000020782	-	97	69.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000001955	CHD5	99	98.694	ENSG00000116254	CHD5	99	98.876	Homo_sapiens
ENSSBOG00000001955	CHD5	99	96.378	ENSAMEG00000009880	CHD5	99	91.869	Ailuropoda_melanoleuca
ENSSBOG00000001955	CHD5	99	80.132	ENSACIG00000012582	chd5	98	74.608	Amphilophus_citrinellus
ENSSBOG00000001955	CHD5	99	79.528	ENSAOCG00000020356	chd5	97	72.988	Amphiprion_ocellaris
ENSSBOG00000001955	CHD5	98	81.609	ENSAPLG00000015475	CHD5	98	77.603	Anas_platyrhynchos
ENSSBOG00000001955	CHD5	99	85.174	ENSACAG00000002441	CHD5	99	79.561	Anolis_carolinensis
ENSSBOG00000001955	CHD5	95	99.245	ENSANAG00000001078	CHD5	92	96.616	Aotus_nancymaae
ENSSBOG00000001955	CHD5	99	76.131	ENSACLG00000003012	chd5	96	71.662	Astatotilapia_calliptera
ENSSBOG00000001955	CHD5	93	82.582	ENSAMXG00000008921	chd5	88	86.957	Astyanax_mexicanus
ENSSBOG00000001955	CHD5	100	96.916	ENSBTAG00000040477	CHD5	100	92.849	Bos_taurus
ENSSBOG00000001955	CHD5	100	99.407	ENSCJAG00000000101	CHD5	99	94.172	Callithrix_jacchus
ENSSBOG00000001955	CHD5	100	97.389	ENSCAFG00000019545	CHD5	100	93.451	Canis_familiaris
ENSSBOG00000001955	CHD5	99	97.386	ENSCAFG00020008689	CHD5	97	92.068	Canis_lupus_dingo
ENSSBOG00000001955	CHD5	99	94.510	ENSCHIG00000015027	CHD5	98	88.768	Capra_hircus
ENSSBOG00000001955	CHD5	98	93.533	ENSTSYG00000033991	CHD5	99	88.745	Carlito_syrichta
ENSSBOG00000001955	CHD5	99	95.476	ENSCAPG00000009294	CHD5	100	91.041	Cavia_aperea
ENSSBOG00000001955	CHD5	99	95.476	ENSCPOG00000025080	CHD5	100	91.041	Cavia_porcellus
ENSSBOG00000001955	CHD5	100	99.288	ENSCCAG00000024756	CHD5	99	94.859	Cebus_capucinus
ENSSBOG00000001955	CHD5	100	99.050	ENSCATG00000043011	CHD5	99	92.740	Cercocebus_atys
ENSSBOG00000001955	CHD5	99	95.833	ENSCLAG00000010589	CHD5	99	91.096	Chinchilla_lanigera
ENSSBOG00000001955	CHD5	100	98.991	ENSCSAG00000000733	CHD5	99	93.814	Chlorocebus_sabaeus
ENSSBOG00000001955	CHD5	99	90.569	ENSCPBG00000019363	CHD5	100	86.945	Chrysemys_picta_bellii
ENSSBOG00000001955	CHD5	100	98.932	ENSCANG00000032302	CHD5	99	94.467	Colobus_angolensis_palliatus
ENSSBOG00000001955	CHD5	51	97.209	ENSCGRG00001011042	Chd5	100	89.717	Cricetulus_griseus_chok1gshd
ENSSBOG00000001955	CHD5	100	94.955	ENSCGRG00000011341	Chd5	99	90.166	Cricetulus_griseus_crigri
ENSSBOG00000001955	CHD5	98	69.425	ENSDARG00000025789	chd4b	96	64.956	Danio_rerio
ENSSBOG00000001955	CHD5	99	78.877	ENSDARG00000105083	chd5	97	79.212	Danio_rerio
ENSSBOG00000001955	CHD5	99	91.330	ENSDNOG00000046342	CHD5	99	86.350	Dasypus_novemcinctus
ENSSBOG00000001955	CHD5	100	96.088	ENSDORG00000005923	Chd5	100	91.257	Dipodomys_ordii
ENSSBOG00000001955	CHD5	99	96.933	ENSEASG00005021464	CHD5	98	90.562	Equus_asinus_asinus
ENSSBOG00000001955	CHD5	99	96.512	ENSECAG00000025043	CHD5	98	96.016	Equus_caballus
ENSSBOG00000001955	CHD5	77	99.070	ENSEEUG00000002772	CHD5	77	99.070	Erinaceus_europaeus
ENSSBOG00000001955	CHD5	99	78.056	ENSELUG00000010742	chd5	90	92.417	Esox_lucius
ENSSBOG00000001955	CHD5	100	97.033	ENSFCAG00000006319	CHD5	100	90.552	Felis_catus
ENSSBOG00000001955	CHD5	99	89.146	ENSFALG00000009740	CHD5	99	83.648	Ficedula_albicollis
ENSSBOG00000001955	CHD5	99	95.408	ENSFDAG00000012881	CHD5	96	90.293	Fukomys_damarensis
ENSSBOG00000001955	CHD5	99	89.133	ENSGALG00000000747	CHD5	99	83.951	Gallus_gallus
ENSSBOG00000001955	CHD5	55	84.250	ENSGACG00000004389	chd5	93	77.402	Gasterosteus_aculeatus
ENSSBOG00000001955	CHD5	98	89.049	ENSGAGG00000001590	CHD5	99	95.610	Gopherus_agassizii
ENSSBOG00000001955	CHD5	99	98.694	ENSGGOG00000000708	CHD5	100	94.407	Gorilla_gorilla
ENSSBOG00000001955	CHD5	99	77.884	ENSHBUG00000013453	chd5	96	73.249	Haplochromis_burtoni
ENSSBOG00000001955	CHD5	99	96.071	ENSHGLG00000018184	CHD5	99	91.671	Heterocephalus_glaber_female
ENSSBOG00000001955	CHD5	99	88.593	ENSHGLG00100013261	CHD5	97	84.755	Heterocephalus_glaber_male
ENSSBOG00000001955	CHD5	98	80.229	ENSIPUG00000005446	chd5	98	75.096	Ictalurus_punctatus
ENSSBOG00000001955	CHD5	100	96.677	ENSSTOG00000002778	CHD5	100	90.368	Ictidomys_tridecemlineatus
ENSSBOG00000001955	CHD5	99	95.179	ENSJJAG00000019072	Chd5	100	89.019	Jaculus_jaculus
ENSSBOG00000001955	CHD5	99	81.969	ENSLOCG00000004944	chd5	97	76.489	Lepisosteus_oculatus
ENSSBOG00000001955	CHD5	99	96.970	ENSLAFG00000006348	CHD5	99	92.539	Loxodonta_africana
ENSSBOG00000001955	CHD5	100	98.991	ENSMFAG00000033993	CHD5	100	94.827	Macaca_fascicularis
ENSSBOG00000001955	CHD5	100	98.872	ENSMMUG00000016838	CHD5	99	94.462	Macaca_mulatta
ENSSBOG00000001955	CHD5	100	98.991	ENSMNEG00000040044	CHD5	99	93.814	Macaca_nemestrina
ENSSBOG00000001955	CHD5	100	95.091	ENSMLEG00000039166	CHD5	100	91.109	Mandrillus_leucophaeus
ENSSBOG00000001955	CHD5	99	75.237	ENSMZEG00005000841	chd5	91	75.815	Maylandia_zebra
ENSSBOG00000001955	CHD5	99	89.074	ENSMGAG00000001055	CHD5	99	84.401	Meleagris_gallopavo
ENSSBOG00000001955	CHD5	99	92.216	ENSMICG00000017862	CHD5	100	89.749	Microcebus_murinus
ENSSBOG00000001955	CHD5	100	95.074	ENSMOCG00000011049	Chd5	99	89.468	Microtus_ochrogaster
ENSSBOG00000001955	CHD5	78	94.226	ENSMODG00000006294	CHD5	78	94.226	Monodelphis_domestica
ENSSBOG00000001955	CHD5	99	79.312	ENSMALG00000002831	chd5	96	74.849	Monopterus_albus
ENSSBOG00000001955	CHD5	100	95.252	MGP_CAROLIEiJ_G0026857	Chd5	100	88.509	Mus_caroli
ENSSBOG00000001955	CHD5	100	95.074	ENSMUSG00000005045	Chd5	100	87.914	Mus_musculus
ENSSBOG00000001955	CHD5	100	95.074	MGP_PahariEiJ_G0029205	Chd5	100	88.253	Mus_pahari
ENSSBOG00000001955	CHD5	100	95.074	MGP_SPRETEiJ_G0027850	Chd5	100	88.304	Mus_spretus
ENSSBOG00000001955	CHD5	99	93.005	ENSMPUG00000007122	CHD5	99	88.816	Mustela_putorius_furo
ENSSBOG00000001955	CHD5	99	94.712	ENSNGAG00000019812	Chd5	96	90.415	Nannospalax_galili
ENSSBOG00000001955	CHD5	100	96.083	ENSNLEG00000010320	CHD5	100	92.264	Nomascus_leucogenys
ENSSBOG00000001955	CHD5	88	87.719	ENSOPRG00000004304	CHD5	87	87.570	Ochotona_princeps
ENSSBOG00000001955	CHD5	99	95.595	ENSODEG00000010262	CHD5	100	90.886	Octodon_degus
ENSSBOG00000001955	CHD5	99	77.999	ENSONIG00000000619	chd5	93	73.238	Oreochromis_niloticus
ENSSBOG00000001955	CHD5	99	70.415	ENSOANG00000001819	CHD5	98	69.091	Ornithorhynchus_anatinus
ENSSBOG00000001955	CHD5	99	97.031	ENSOGAG00000005703	CHD5	99	90.026	Otolemur_garnettii
ENSSBOG00000001955	CHD5	100	95.190	ENSOARG00000013425	CHD5	98	90.589	Ovis_aries
ENSSBOG00000001955	CHD5	99	98.694	ENSPPAG00000034048	CHD5	100	94.410	Pan_paniscus
ENSSBOG00000001955	CHD5	100	96.320	ENSPPRG00000009453	CHD5	100	89.939	Panthera_pardus
ENSSBOG00000001955	CHD5	100	88.869	ENSPTIG00000013926	CHD5	100	84.592	Panthera_tigris_altaica
ENSSBOG00000001955	CHD5	99	98.694	ENSPTRG00000000075	CHD5	99	93.613	Pan_troglodytes
ENSSBOG00000001955	CHD5	100	98.991	ENSPANG00000006765	CHD5	99	93.763	Papio_anubis
ENSSBOG00000001955	CHD5	97	80.073	ENSPKIG00000004282	chd5	94	92.417	Paramormyrops_kingsleyae
ENSSBOG00000001955	CHD5	99	83.580	ENSPSIG00000006414	CHD5	99	79.407	Pelodiscus_sinensis
ENSSBOG00000001955	CHD5	65	97.248	ENSPEMG00000014799	Chd5	100	90.827	Peromyscus_maniculatus_bairdii
ENSSBOG00000001955	CHD5	99	92.230	ENSPCIG00000028310	CHD5	98	87.926	Phascolarctos_cinereus
ENSSBOG00000001955	CHD5	99	78.386	ENSPLAG00000005343	chd5	89	78.692	Poecilia_latipinna
ENSSBOG00000001955	CHD5	99	92.976	ENSPPYG00000001952	CHD5	100	94.462	Pongo_abelii
ENSSBOG00000001955	CHD5	100	97.567	ENSPCOG00000022930	CHD5	99	92.536	Propithecus_coquereli
ENSSBOG00000001955	CHD5	99	79.331	ENSPNYG00000003183	chd5	98	73.698	Pundamilia_nyererei
ENSSBOG00000001955	CHD5	100	95.193	ENSRNOG00000011268	Chd5	99	90.228	Rattus_norvegicus
ENSSBOG00000001955	CHD5	100	99.170	ENSRBIG00000032140	CHD5	97	94.710	Rhinopithecus_bieti
ENSSBOG00000001955	CHD5	100	98.635	ENSRROG00000041146	CHD5	99	94.303	Rhinopithecus_roxellana
ENSSBOG00000001955	CHD5	99	86.053	ENSSHAG00000018641	CHD5	99	82.100	Sarcophilus_harrisii
ENSSBOG00000001955	CHD5	99	78.999	ENSSFOG00015006296	chd5	88	87.352	Scleropages_formosus
ENSSBOG00000001955	CHD5	99	80.453	ENSSDUG00000017526	chd5	92	91.469	Seriola_dumerili
ENSSBOG00000001955	CHD5	98	82.042	ENSSPUG00000010622	CHD5	98	80.362	Sphenodon_punctatus
ENSSBOG00000001955	CHD5	100	97.211	ENSSSCG00000003366	CHD5	100	92.680	Sus_scrofa
ENSSBOG00000001955	CHD5	97	82.883	ENSTGUG00000002634	-	100	80.213	Taeniopygia_guttata
ENSSBOG00000001955	CHD5	51	82.870	ENSTNIG00000004346	chd5	99	76.130	Tetraodon_nigroviridis
ENSSBOG00000001955	CHD5	100	94.481	ENSTTRG00000010468	CHD5	100	88.554	Tursiops_truncatus
ENSSBOG00000001955	CHD5	99	97.267	ENSUAMG00000024509	CHD5	98	92.842	Ursus_americanus
ENSSBOG00000001955	CHD5	100	90.488	ENSUMAG00000024173	CHD5	98	88.667	Ursus_maritimus
ENSSBOG00000001955	CHD5	99	96.140	ENSVVUG00000026480	CHD5	96	97.561	Vulpes_vulpes
ENSSBOG00000001955	CHD5	99	80.351	ENSXETG00000002904	chd5	100	75.745	Xenopus_tropicalis
ENSSBOG00000001955	CHD5	56	84.361	ENSXCOG00000014202	chd5	88	85.731	Xiphophorus_couchianus