EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000004896 (Gene tree)
Gene ID: 101039056
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 63450 bases
Position: chrJH378334.1:515903-579352
Accession: 26114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000001111	FDF	PF09532.10	9.2e-19	1	1
ENSSBOP00000001111	LSM14	PF12701.7	9.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000005729	EDC3-201	3807	XM_003944784	ENSSBOP00000001111	508 (aa)	XP_003944833	A0A2K6S146

Gene Model

Click here to download ENSSBOG00000004896's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000004896's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000004896	EDC3	100	98.819	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSSBOG00000004896	EDC3	100	56.117	ENSAPOG00000008655	EDC3	100	56.117	Acanthochromis_polyacanthus
ENSSBOG00000004896	EDC3	100	69.804	ENSAPOG00000010791	edc3	100	69.804	Acanthochromis_polyacanthus
ENSSBOG00000004896	EDC3	100	96.654	ENSAMEG00000008963	EDC3	100	96.654	Ailuropoda_melanoleuca
ENSSBOG00000004896	EDC3	99	59.922	ENSACIG00000005330	EDC3	99	59.922	Amphilophus_citrinellus
ENSSBOG00000004896	EDC3	100	68.762	ENSACIG00000017751	edc3	100	68.762	Amphilophus_citrinellus
ENSSBOG00000004896	EDC3	100	58.027	ENSAOCG00000009103	-	100	58.140	Amphiprion_ocellaris
ENSSBOG00000004896	EDC3	100	69.804	ENSAOCG00000005431	edc3	100	69.804	Amphiprion_ocellaris
ENSSBOG00000004896	EDC3	100	58.140	ENSAPEG00000007841	EDC3	100	58.140	Amphiprion_percula
ENSSBOG00000004896	EDC3	100	69.804	ENSAPEG00000000968	edc3	100	69.804	Amphiprion_percula
ENSSBOG00000004896	EDC3	100	69.941	ENSATEG00000015505	edc3	100	69.941	Anabas_testudineus
ENSSBOG00000004896	EDC3	100	58.509	ENSATEG00000004205	-	100	58.509	Anabas_testudineus
ENSSBOG00000004896	EDC3	90	87.692	ENSAPLG00000008957	EDC3	100	87.692	Anas_platyrhynchos
ENSSBOG00000004896	EDC3	78	87.154	ENSACAG00000000460	-	100	87.154	Anolis_carolinensis
ENSSBOG00000004896	EDC3	100	99.409	ENSANAG00000024078	EDC3	100	99.409	Aotus_nancymaae
ENSSBOG00000004896	EDC3	99	58.674	ENSACLG00000018776	-	99	58.674	Astatotilapia_calliptera
ENSSBOG00000004896	EDC3	100	67.780	ENSACLG00000007232	edc3	100	67.780	Astatotilapia_calliptera
ENSSBOG00000004896	EDC3	100	70.175	ENSAMXG00000001589	edc3	100	70.175	Astyanax_mexicanus
ENSSBOG00000004896	EDC3	100	97.441	ENSBTAG00000007308	EDC3	100	97.441	Bos_taurus
ENSSBOG00000004896	EDC3	100	99.409	ENSCJAG00000017681	EDC3	100	99.409	Callithrix_jacchus
ENSSBOG00000004896	EDC3	100	96.850	ENSCAFG00000017935	EDC3	100	96.850	Canis_familiaris
ENSSBOG00000004896	EDC3	100	96.850	ENSCAFG00020003909	EDC3	100	96.850	Canis_lupus_dingo
ENSSBOG00000004896	EDC3	100	97.244	ENSCHIG00000023658	EDC3	100	97.244	Capra_hircus
ENSSBOG00000004896	EDC3	100	97.835	ENSTSYG00000004822	EDC3	100	97.835	Carlito_syrichta
ENSSBOG00000004896	EDC3	100	96.063	ENSCPOG00000015595	EDC3	100	96.063	Cavia_porcellus
ENSSBOG00000004896	EDC3	100	99.803	ENSCCAG00000021663	EDC3	100	99.803	Cebus_capucinus
ENSSBOG00000004896	EDC3	100	99.016	ENSCATG00000037511	EDC3	100	99.016	Cercocebus_atys
ENSSBOG00000004896	EDC3	100	95.866	ENSCLAG00000005700	EDC3	100	95.866	Chinchilla_lanigera
ENSSBOG00000004896	EDC3	100	99.016	ENSCSAG00000014239	EDC3	100	99.016	Chlorocebus_sabaeus
ENSSBOG00000004896	EDC3	100	89.567	ENSCPBG00000024239	EDC3	100	89.567	Chrysemys_picta_bellii
ENSSBOG00000004896	EDC3	100	38.654	ENSCING00000022142	-	99	38.654	Ciona_intestinalis
ENSSBOG00000004896	EDC3	100	99.016	ENSCANG00000028699	EDC3	100	99.016	Colobus_angolensis_palliatus
ENSSBOG00000004896	EDC3	100	96.850	ENSCGRG00001013874	Edc3	100	96.850	Cricetulus_griseus_chok1gshd
ENSSBOG00000004896	EDC3	100	96.850	ENSCGRG00000011885	Edc3	100	96.850	Cricetulus_griseus_crigri
ENSSBOG00000004896	EDC3	99	69.488	ENSCSEG00000012996	edc3	99	69.488	Cynoglossus_semilaevis
ENSSBOG00000004896	EDC3	100	68.369	ENSCVAG00000008023	edc3	100	68.369	Cyprinodon_variegatus
ENSSBOG00000004896	EDC3	99	68.750	ENSDARG00000051931	edc3	99	69.216	Danio_rerio
ENSSBOG00000004896	EDC3	100	85.271	ENSDNOG00000030661	EDC3	100	85.271	Dasypus_novemcinctus
ENSSBOG00000004896	EDC3	64	98.148	ENSETEG00000002398	-	64	98.148	Echinops_telfairi
ENSSBOG00000004896	EDC3	100	98.031	ENSEASG00005005071	EDC3	100	98.031	Equus_asinus_asinus
ENSSBOG00000004896	EDC3	100	98.031	ENSECAG00000017994	EDC3	100	98.031	Equus_caballus
ENSSBOG00000004896	EDC3	100	65.887	ENSELUG00000005794	edc3	100	65.887	Esox_lucius
ENSSBOG00000004896	EDC3	100	62.840	ENSELUG00000007607	EDC3	100	62.427	Esox_lucius
ENSSBOG00000004896	EDC3	100	96.457	ENSFCAG00000002014	EDC3	100	96.457	Felis_catus
ENSSBOG00000004896	EDC3	98	85.170	ENSFALG00000004543	EDC3	96	85.170	Ficedula_albicollis
ENSSBOG00000004896	EDC3	100	95.472	ENSFDAG00000012582	EDC3	100	95.472	Fukomys_damarensis
ENSSBOG00000004896	EDC3	100	69.608	ENSFHEG00000009375	edc3	100	69.608	Fundulus_heteroclitus
ENSSBOG00000004896	EDC3	100	68.555	ENSGMOG00000002715	edc3	100	68.555	Gadus_morhua
ENSSBOG00000004896	EDC3	100	89.173	ENSGALG00000040181	EDC3	100	89.173	Gallus_gallus
ENSSBOG00000004896	EDC3	100	67.976	ENSGAFG00000014433	edc3	100	68.039	Gambusia_affinis
ENSSBOG00000004896	EDC3	99	55.470	ENSGACG00000014671	EDC3	99	56.311	Gasterosteus_aculeatus
ENSSBOG00000004896	EDC3	100	68.762	ENSGACG00000009783	edc3	100	68.762	Gasterosteus_aculeatus
ENSSBOG00000004896	EDC3	100	89.173	ENSGAGG00000023477	EDC3	100	89.173	Gopherus_agassizii
ENSSBOG00000004896	EDC3	100	99.016	ENSGGOG00000003552	EDC3	100	99.016	Gorilla_gorilla
ENSSBOG00000004896	EDC3	100	67.780	ENSHBUG00000003635	edc3	100	67.780	Haplochromis_burtoni
ENSSBOG00000004896	EDC3	99	58.674	ENSHBUG00000020817	EDC3	99	58.674	Haplochromis_burtoni
ENSSBOG00000004896	EDC3	100	67.578	ENSHCOG00000016834	edc3	100	67.710	Hippocampus_comes
ENSSBOG00000004896	EDC3	99	70.138	ENSIPUG00000005695	edc3	100	70.138	Ictalurus_punctatus
ENSSBOG00000004896	EDC3	100	98.031	ENSSTOG00000013936	EDC3	100	98.031	Ictidomys_tridecemlineatus
ENSSBOG00000004896	EDC3	100	95.866	ENSJJAG00000008074	Edc3	100	95.866	Jaculus_jaculus
ENSSBOG00000004896	EDC3	100	68.959	ENSKMAG00000001243	edc3	100	68.959	Kryptolebias_marmoratus
ENSSBOG00000004896	EDC3	100	55.709	ENSKMAG00000001987	EDC3	100	55.709	Kryptolebias_marmoratus
ENSSBOG00000004896	EDC3	100	58.333	ENSLBEG00000017984	EDC3	100	58.333	Labrus_bergylta
ENSSBOG00000004896	EDC3	100	69.412	ENSLBEG00000013435	edc3	99	69.412	Labrus_bergylta
ENSSBOG00000004896	EDC3	100	77.282	ENSLACG00000014149	EDC3	100	77.282	Latimeria_chalumnae
ENSSBOG00000004896	EDC3	99	67.446	ENSLOCG00000014625	edc3	99	67.446	Lepisosteus_oculatus
ENSSBOG00000004896	EDC3	100	96.063	ENSLAFG00000002992	EDC3	100	96.063	Loxodonta_africana
ENSSBOG00000004896	EDC3	100	98.622	ENSMFAG00000043074	EDC3	100	98.622	Macaca_fascicularis
ENSSBOG00000004896	EDC3	100	98.622	ENSMMUG00000011071	EDC3	100	98.622	Macaca_mulatta
ENSSBOG00000004896	EDC3	100	98.622	ENSMNEG00000035316	EDC3	100	98.622	Macaca_nemestrina
ENSSBOG00000004896	EDC3	100	99.016	ENSMLEG00000030372	EDC3	100	99.016	Mandrillus_leucophaeus
ENSSBOG00000004896	EDC3	99	56.641	ENSMAMG00000005423	-	99	56.641	Mastacembelus_armatus
ENSSBOG00000004896	EDC3	100	69.745	ENSMAMG00000000505	edc3	100	69.745	Mastacembelus_armatus
ENSSBOG00000004896	EDC3	99	58.984	ENSMZEG00005005654	EDC3	99	58.984	Maylandia_zebra
ENSSBOG00000004896	EDC3	100	67.780	ENSMZEG00005004892	edc3	100	67.780	Maylandia_zebra
ENSSBOG00000004896	EDC3	100	88.189	ENSMGAG00000002617	EDC3	100	88.189	Meleagris_gallopavo
ENSSBOG00000004896	EDC3	100	97.441	ENSMICG00000043190	EDC3	100	97.441	Microcebus_murinus
ENSSBOG00000004896	EDC3	100	96.850	ENSMOCG00000016205	Edc3	100	96.850	Microtus_ochrogaster
ENSSBOG00000004896	EDC3	99	68.959	ENSMMOG00000012278	edc3	99	68.959	Mola_mola
ENSSBOG00000004896	EDC3	100	93.110	ENSMODG00000009442	EDC3	100	93.110	Monodelphis_domestica
ENSSBOG00000004896	EDC3	100	69.745	ENSMALG00000008658	edc3	100	69.745	Monopterus_albus
ENSSBOG00000004896	EDC3	100	96.260	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSSBOG00000004896	EDC3	100	95.866	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSSBOG00000004896	EDC3	100	96.457	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSSBOG00000004896	EDC3	100	95.669	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSSBOG00000004896	EDC3	100	96.260	ENSMPUG00000017293	EDC3	100	96.260	Mustela_putorius_furo
ENSSBOG00000004896	EDC3	100	97.255	ENSMLUG00000016382	EDC3	100	97.255	Myotis_lucifugus
ENSSBOG00000004896	EDC3	100	96.260	ENSNGAG00000010923	Edc3	100	96.260	Nannospalax_galili
ENSSBOG00000004896	EDC3	100	68.173	ENSNBRG00000002434	edc3	100	68.173	Neolamprologus_brichardi
ENSSBOG00000004896	EDC3	99	58.984	ENSNBRG00000007881	EDC3	99	58.984	Neolamprologus_brichardi
ENSSBOG00000004896	EDC3	100	89.370	ENSNLEG00000014577	EDC3	100	89.370	Nomascus_leucogenys
ENSSBOG00000004896	EDC3	100	92.126	ENSMEUG00000009077	EDC3	100	92.126	Notamacropus_eugenii
ENSSBOG00000004896	EDC3	79	96.296	ENSOPRG00000009540	-	79	96.296	Ochotona_princeps
ENSSBOG00000004896	EDC3	100	67.976	ENSONIG00000008434	edc3	100	67.976	Oreochromis_niloticus
ENSSBOG00000004896	EDC3	99	60.039	ENSONIG00000002932	-	99	60.039	Oreochromis_niloticus
ENSSBOG00000004896	EDC3	78	92.695	ENSOCUG00000017740	EDC3	86	92.695	Oryctolagus_cuniculus
ENSSBOG00000004896	EDC3	100	67.191	ENSORLG00000004883	edc3	100	67.191	Oryzias_latipes
ENSSBOG00000004896	EDC3	100	56.615	ENSORLG00000014399	-	98	56.615	Oryzias_latipes
ENSSBOG00000004896	EDC3	100	56.615	ENSORLG00020019446	-	100	56.615	Oryzias_latipes_hni
ENSSBOG00000004896	EDC3	100	67.583	ENSORLG00020012262	edc3	100	67.583	Oryzias_latipes_hni
ENSSBOG00000004896	EDC3	100	67.383	ENSORLG00015005634	edc3	100	67.383	Oryzias_latipes_hsok
ENSSBOG00000004896	EDC3	100	56.031	ENSORLG00015017635	-	96	56.031	Oryzias_latipes_hsok
ENSSBOG00000004896	EDC3	100	56.836	ENSOMEG00000017354	EDC3	100	56.836	Oryzias_melastigma
ENSSBOG00000004896	EDC3	100	68.824	ENSOMEG00000014026	edc3	100	68.824	Oryzias_melastigma
ENSSBOG00000004896	EDC3	100	97.835	ENSOGAG00000014441	EDC3	100	97.835	Otolemur_garnettii
ENSSBOG00000004896	EDC3	100	96.857	ENSOARG00000003476	EDC3	100	96.857	Ovis_aries
ENSSBOG00000004896	EDC3	100	99.016	ENSPPAG00000040143	EDC3	100	99.016	Pan_paniscus
ENSSBOG00000004896	EDC3	100	96.850	ENSPPRG00000006257	EDC3	100	96.850	Panthera_pardus
ENSSBOG00000004896	EDC3	100	96.850	ENSPTIG00000017424	EDC3	100	96.850	Panthera_tigris_altaica
ENSSBOG00000004896	EDC3	100	99.016	ENSPTRG00000007279	EDC3	100	99.016	Pan_troglodytes
ENSSBOG00000004896	EDC3	100	99.016	ENSPANG00000015997	EDC3	100	99.016	Papio_anubis
ENSSBOG00000004896	EDC3	100	65.820	ENSPKIG00000019810	EDC3	100	65.820	Paramormyrops_kingsleyae
ENSSBOG00000004896	EDC3	100	68.555	ENSPKIG00000004416	edc3	100	69.531	Paramormyrops_kingsleyae
ENSSBOG00000004896	EDC3	100	83.858	ENSPSIG00000008474	EDC3	100	83.858	Pelodiscus_sinensis
ENSSBOG00000004896	EDC3	100	66.928	ENSPMGG00000007223	edc3	100	66.928	Periophthalmus_magnuspinnatus
ENSSBOG00000004896	EDC3	100	96.654	ENSPEMG00000015260	Edc3	100	96.654	Peromyscus_maniculatus_bairdii
ENSSBOG00000004896	EDC3	100	90.945	ENSPCIG00000006276	EDC3	70	91.124	Phascolarctos_cinereus
ENSSBOG00000004896	EDC3	100	68.872	ENSPFOG00000012204	edc3	100	68.872	Poecilia_formosa
ENSSBOG00000004896	EDC3	100	68.872	ENSPLAG00000014420	edc3	100	68.872	Poecilia_latipinna
ENSSBOG00000004896	EDC3	100	68.872	ENSPMEG00000023289	edc3	100	68.872	Poecilia_mexicana
ENSSBOG00000004896	EDC3	100	69.155	ENSPREG00000016022	edc3	100	69.155	Poecilia_reticulata
ENSSBOG00000004896	EDC3	100	97.835	ENSPPYG00000006642	EDC3	100	97.835	Pongo_abelii
ENSSBOG00000004896	EDC3	88	100.000	ENSPCAG00000002802	EDC3	88	100.000	Procavia_capensis
ENSSBOG00000004896	EDC3	100	97.638	ENSPCOG00000013364	EDC3	100	97.638	Propithecus_coquereli
ENSSBOG00000004896	EDC3	100	96.654	ENSPVAG00000014733	EDC3	100	96.654	Pteropus_vampyrus
ENSSBOG00000004896	EDC3	100	67.780	ENSPNYG00000021797	edc3	100	67.780	Pundamilia_nyererei
ENSSBOG00000004896	EDC3	99	58.674	ENSPNYG00000009669	EDC3	99	58.674	Pundamilia_nyererei
ENSSBOG00000004896	EDC3	100	69.786	ENSPNAG00000019657	edc3	100	69.786	Pygocentrus_nattereri
ENSSBOG00000004896	EDC3	99	96.436	ENSRNOG00000019579	Edc3	99	96.436	Rattus_norvegicus
ENSSBOG00000004896	EDC3	100	98.622	ENSRBIG00000019488	EDC3	100	98.622	Rhinopithecus_bieti
ENSSBOG00000004896	EDC3	100	98.622	ENSRROG00000034959	EDC3	100	98.622	Rhinopithecus_roxellana
ENSSBOG00000004896	EDC3	96	91.616	ENSSHAG00000015075	EDC3	95	91.616	Sarcophilus_harrisii
ENSSBOG00000004896	EDC3	100	63.529	ENSSFOG00015002439	edc3	100	65.175	Scleropages_formosus
ENSSBOG00000004896	EDC3	100	70.135	ENSSFOG00015016939	edc3	100	71.206	Scleropages_formosus
ENSSBOG00000004896	EDC3	100	68.824	ENSSMAG00000010695	edc3	100	69.352	Scophthalmus_maximus
ENSSBOG00000004896	EDC3	99	56.897	ENSSMAG00000010176	-	99	56.897	Scophthalmus_maximus
ENSSBOG00000004896	EDC3	100	69.216	ENSSDUG00000021844	edc3	100	69.216	Seriola_dumerili
ENSSBOG00000004896	EDC3	100	59.806	ENSSDUG00000007671	EDC3	100	59.806	Seriola_dumerili
ENSSBOG00000004896	EDC3	100	69.216	ENSSLDG00000022046	edc3	100	69.216	Seriola_lalandi_dorsalis
ENSSBOG00000004896	EDC3	81	96.371	ENSSARG00000003907	EDC3	80	96.371	Sorex_araneus
ENSSBOG00000004896	EDC3	100	88.583	ENSSPUG00000008232	EDC3	100	88.583	Sphenodon_punctatus
ENSSBOG00000004896	EDC3	100	57.782	ENSSPAG00000020327	EDC3	100	57.782	Stegastes_partitus
ENSSBOG00000004896	EDC3	100	69.608	ENSSPAG00000010009	edc3	100	69.608	Stegastes_partitus
ENSSBOG00000004896	EDC3	100	97.835	ENSSSCG00000001903	EDC3	100	97.835	Sus_scrofa
ENSSBOG00000004896	EDC3	100	88.780	ENSTGUG00000004007	EDC3	100	88.780	Taeniopygia_guttata
ENSSBOG00000004896	EDC3	100	70.138	ENSTRUG00000017078	edc3	100	70.138	Takifugu_rubripes
ENSSBOG00000004896	EDC3	100	68.555	ENSTNIG00000016047	edc3	100	68.555	Tetraodon_nigroviridis
ENSSBOG00000004896	EDC3	100	97.244	ENSTTRG00000007990	EDC3	100	97.244	Tursiops_truncatus
ENSSBOG00000004896	EDC3	100	96.654	ENSUAMG00000026710	-	100	96.654	Ursus_americanus
ENSSBOG00000004896	EDC3	100	96.654	ENSUMAG00000005006	EDC3	96	96.654	Ursus_maritimus
ENSSBOG00000004896	EDC3	79	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSSBOG00000004896	EDC3	100	97.047	ENSVVUG00000018601	EDC3	100	97.047	Vulpes_vulpes
ENSSBOG00000004896	EDC3	68	82.471	ENSXETG00000010622	edc3	99	83.621	Xenopus_tropicalis
ENSSBOG00000004896	EDC3	100	68.959	ENSXMAG00000007377	edc3	100	68.959	Xiphophorus_maculatus