EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000006542 (Gene tree)
Gene ID: 101030833
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 555 bases
Position: chrJH378276.1:2937208-2937762
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000001316	S4	PF01479.25	1.4e-08	1	1
ENSSBOP00000001316	Ribosomal_S4	PF00163.19	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000007197	-	555	XM_003943001	ENSSBOP00000001316	184 (aa)	XP_003943050	A0A2K6S1Q6

Gene Model

Click here to download ENSSBOG00000006542's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000006542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000006542	-	66	33.871	ENSSBOG00000015501	-	78	30.631
ENSSBOG00000006542	-	100	84.783	ENSSBOG00000026404	-	100	84.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000006542	-	100	66.848	ENSAPOG00000014720	imp3	100	66.848	Acanthochromis_polyacanthus
ENSSBOG00000006542	-	100	98.370	ENSAMEG00000019247	IMP3	100	98.370	Ailuropoda_melanoleuca
ENSSBOG00000006542	-	98	67.222	ENSACIG00000022070	imp3	96	67.222	Amphilophus_citrinellus
ENSSBOG00000006542	-	100	67.935	ENSAOCG00000015761	imp3	100	67.935	Amphiprion_ocellaris
ENSSBOG00000006542	-	99	67.582	ENSAPEG00000005250	imp3	99	67.582	Amphiprion_percula
ENSSBOG00000006542	-	100	68.478	ENSATEG00000020021	imp3	100	68.478	Anabas_testudineus
ENSSBOG00000006542	-	99	73.514	ENSACAG00000016259	IMP3	99	73.514	Anolis_carolinensis
ENSSBOG00000006542	-	100	100.000	ENSANAG00000016669	-	100	100.000	Aotus_nancymaae
ENSSBOG00000006542	-	99	84.699	ENSANAG00000036874	-	99	84.699	Aotus_nancymaae
ENSSBOG00000006542	-	100	70.109	ENSACLG00000009929	imp3	100	70.109	Astatotilapia_calliptera
ENSSBOG00000006542	-	96	69.886	ENSAMXG00000018715	imp3	99	69.886	Astyanax_mexicanus
ENSSBOG00000006542	-	99	51.099	WBGene00016740	C48B6.2	99	51.099	Caenorhabditis_elegans
ENSSBOG00000006542	-	100	100.000	ENSCJAG00000044585	IMP3	100	100.000	Callithrix_jacchus
ENSSBOG00000006542	-	100	96.196	ENSCAFG00000018039	IMP3	82	96.196	Canis_familiaris
ENSSBOG00000006542	-	100	96.196	ENSCAFG00020003760	-	100	96.196	Canis_lupus_dingo
ENSSBOG00000006542	-	100	72.283	ENSCAFG00020006737	-	100	71.728	Canis_lupus_dingo
ENSSBOG00000006542	-	100	98.370	ENSCHIG00000006295	IMP3	100	98.370	Capra_hircus
ENSSBOG00000006542	-	100	98.913	ENSTSYG00000005503	IMP3	100	98.913	Carlito_syrichta
ENSSBOG00000006542	-	100	97.826	ENSCPOG00000012016	IMP3	100	97.826	Cavia_porcellus
ENSSBOG00000006542	-	98	84.530	ENSCCAG00000023378	-	99	84.000	Cebus_capucinus
ENSSBOG00000006542	-	100	100.000	ENSCCAG00000002712	-	100	100.000	Cebus_capucinus
ENSSBOG00000006542	-	100	98.913	ENSCATG00000015188	IMP3	100	98.913	Cercocebus_atys
ENSSBOG00000006542	-	100	98.913	ENSCSAG00000019732	IMP3	100	98.913	Chlorocebus_sabaeus
ENSSBOG00000006542	-	100	97.826	ENSCHOG00000012046	IMP3	100	97.826	Choloepus_hoffmanni
ENSSBOG00000006542	-	99	74.317	ENSCPBG00000021662	IMP3	99	74.317	Chrysemys_picta_bellii
ENSSBOG00000006542	-	98	59.669	ENSCING00000004233	-	99	59.669	Ciona_intestinalis
ENSSBOG00000006542	-	98	62.983	ENSCSAVG00000000698	-	99	62.983	Ciona_savignyi
ENSSBOG00000006542	-	100	98.913	ENSCANG00000018342	IMP3	100	98.913	Colobus_angolensis_palliatus
ENSSBOG00000006542	-	100	96.196	ENSCGRG00001001326	Imp3	100	96.196	Cricetulus_griseus_chok1gshd
ENSSBOG00000006542	-	100	96.196	ENSCGRG00000018907	Imp3	100	96.196	Cricetulus_griseus_crigri
ENSSBOG00000006542	-	99	68.132	ENSCSEG00000017200	imp3	99	68.132	Cynoglossus_semilaevis
ENSSBOG00000006542	-	100	61.780	ENSCVAG00000019511	imp3	100	61.780	Cyprinodon_variegatus
ENSSBOG00000006542	-	100	69.022	ENSDARG00000115266	imp3	100	69.022	Danio_rerio
ENSSBOG00000006542	-	100	97.826	ENSDNOG00000015787	IMP3	81	97.826	Dasypus_novemcinctus
ENSSBOG00000006542	-	100	96.196	ENSDORG00000029301	Imp3	100	96.196	Dipodomys_ordii
ENSSBOG00000006542	-	99	57.143	FBgn0034232	CG4866	100	57.143	Drosophila_melanogaster
ENSSBOG00000006542	-	100	95.652	ENSETEG00000004278	IMP3	100	95.652	Echinops_telfairi
ENSSBOG00000006542	-	99	66.484	ENSEBUG00000002343	imp3	99	66.484	Eptatretus_burgeri
ENSSBOG00000006542	-	100	98.913	ENSEASG00005015693	IMP3	100	98.913	Equus_asinus_asinus
ENSSBOG00000006542	-	100	99.457	ENSECAG00000015786	IMP3	100	99.457	Equus_caballus
ENSSBOG00000006542	-	99	68.681	ENSELUG00000023264	imp3	99	68.681	Esox_lucius
ENSSBOG00000006542	-	100	99.457	ENSFCAG00000040328	IMP3	100	99.457	Felis_catus
ENSSBOG00000006542	-	71	65.152	ENSFALG00000014811	IMP3	100	65.152	Ficedula_albicollis
ENSSBOG00000006542	-	100	97.283	ENSFDAG00000018422	IMP3	100	97.283	Fukomys_damarensis
ENSSBOG00000006542	-	100	70.109	ENSFHEG00000016954	imp3	100	70.109	Fundulus_heteroclitus
ENSSBOG00000006542	-	99	66.484	ENSGMOG00000018162	imp3	99	66.484	Gadus_morhua
ENSSBOG00000006542	-	100	65.946	ENSGALG00000040238	IMP3	100	65.946	Gallus_gallus
ENSSBOG00000006542	-	100	68.478	ENSGAFG00000007425	imp3	100	68.478	Gambusia_affinis
ENSSBOG00000006542	-	99	68.132	ENSGACG00000015998	imp3	99	68.132	Gasterosteus_aculeatus
ENSSBOG00000006542	-	99	74.317	ENSGAGG00000008163	IMP3	99	74.317	Gopherus_agassizii
ENSSBOG00000006542	-	100	98.913	ENSGGOG00000025122	IMP3	100	98.913	Gorilla_gorilla
ENSSBOG00000006542	-	100	70.109	ENSHBUG00000018453	imp3	100	70.109	Haplochromis_burtoni
ENSSBOG00000006542	-	100	97.283	ENSHGLG00000019824	IMP3	100	97.283	Heterocephalus_glaber_female
ENSSBOG00000006542	-	100	97.283	ENSHGLG00100020660	IMP3	100	97.283	Heterocephalus_glaber_male
ENSSBOG00000006542	-	100	66.848	ENSHCOG00000020565	imp3	100	66.848	Hippocampus_comes
ENSSBOG00000006542	-	99	71.429	ENSIPUG00000013142	imp3	99	71.429	Ictalurus_punctatus
ENSSBOG00000006542	-	100	98.370	ENSSTOG00000030143	IMP3	100	98.370	Ictidomys_tridecemlineatus
ENSSBOG00000006542	-	100	67.935	ENSKMAG00000001956	imp3	100	67.935	Kryptolebias_marmoratus
ENSSBOG00000006542	-	99	68.132	ENSLBEG00000008178	imp3	99	68.132	Labrus_bergylta
ENSSBOG00000006542	-	100	73.913	ENSLACG00000022148	imp3	100	73.913	Latimeria_chalumnae
ENSSBOG00000006542	-	99	70.330	ENSLOCG00000010237	imp3	99	70.330	Lepisosteus_oculatus
ENSSBOG00000006542	-	100	97.283	ENSLAFG00000004425	IMP3	100	97.283	Loxodonta_africana
ENSSBOG00000006542	-	100	98.913	ENSMFAG00000008867	IMP3	100	98.913	Macaca_fascicularis
ENSSBOG00000006542	-	100	98.913	ENSMMUG00000016103	IMP3	100	98.913	Macaca_mulatta
ENSSBOG00000006542	-	100	98.913	ENSMNEG00000026328	IMP3	100	98.913	Macaca_nemestrina
ENSSBOG00000006542	-	100	69.022	ENSMAMG00000003215	imp3	100	69.022	Mastacembelus_armatus
ENSSBOG00000006542	-	100	70.109	ENSMZEG00005005544	imp3	100	70.109	Maylandia_zebra
ENSSBOG00000006542	-	100	96.739	ENSMAUG00000010279	Imp3	100	96.739	Mesocricetus_auratus
ENSSBOG00000006542	-	100	98.370	ENSMICG00000044149	IMP3	100	98.370	Microcebus_murinus
ENSSBOG00000006542	-	100	96.196	ENSMOCG00000008647	Imp3	100	96.196	Microtus_ochrogaster
ENSSBOG00000006542	-	96	69.318	ENSMMOG00000018117	imp3	84	69.318	Mola_mola
ENSSBOG00000006542	-	100	85.326	ENSMODG00000025193	IMP3	100	85.326	Monodelphis_domestica
ENSSBOG00000006542	-	99	70.330	ENSMALG00000006505	imp3	99	70.330	Monopterus_albus
ENSSBOG00000006542	-	100	96.739	MGP_CAROLIEiJ_G0032258	Imp3	100	96.739	Mus_caroli
ENSSBOG00000006542	-	100	96.196	ENSMUSG00000032288	Imp3	100	96.196	Mus_musculus
ENSSBOG00000006542	-	100	96.739	MGP_PahariEiJ_G0015125	Imp3	100	96.739	Mus_pahari
ENSSBOG00000006542	-	100	96.196	MGP_SPRETEiJ_G0033398	Imp3	100	96.196	Mus_spretus
ENSSBOG00000006542	-	100	98.370	ENSMPUG00000020147	IMP3	100	98.370	Mustela_putorius_furo
ENSSBOG00000006542	-	100	98.370	ENSMLUG00000014032	IMP3	100	98.370	Myotis_lucifugus
ENSSBOG00000006542	-	100	95.109	ENSNGAG00000017248	Imp3	100	95.109	Nannospalax_galili
ENSSBOG00000006542	-	100	70.109	ENSNBRG00000004060	imp3	100	70.109	Neolamprologus_brichardi
ENSSBOG00000006542	-	100	97.283	ENSOPRG00000015906	-	100	97.283	Ochotona_princeps
ENSSBOG00000006542	-	100	97.826	ENSODEG00000020194	IMP3	100	97.826	Octodon_degus
ENSSBOG00000006542	-	100	69.565	ENSONIG00000010661	imp3	100	69.565	Oreochromis_niloticus
ENSSBOG00000006542	-	100	98.913	ENSOCUG00000004690	IMP3	100	98.913	Oryctolagus_cuniculus
ENSSBOG00000006542	-	100	69.565	ENSORLG00000004484	imp3	100	69.565	Oryzias_latipes
ENSSBOG00000006542	-	100	69.565	ENSORLG00020003771	imp3	100	69.565	Oryzias_latipes_hni
ENSSBOG00000006542	-	100	69.022	ENSORLG00015006933	imp3	100	69.022	Oryzias_latipes_hsok
ENSSBOG00000006542	-	100	69.565	ENSOMEG00000016160	imp3	100	69.565	Oryzias_melastigma
ENSSBOG00000006542	-	100	98.370	ENSOGAG00000004917	IMP3	100	98.370	Otolemur_garnettii
ENSSBOG00000006542	-	100	98.913	ENSPPAG00000009241	IMP3	100	98.913	Pan_paniscus
ENSSBOG00000006542	-	100	99.457	ENSPPRG00000018701	IMP3	100	99.457	Panthera_pardus
ENSSBOG00000006542	-	100	98.913	ENSPTRG00000052235	IMP3	100	98.913	Pan_troglodytes
ENSSBOG00000006542	-	100	98.913	ENSPANG00000013668	IMP3	100	98.913	Papio_anubis
ENSSBOG00000006542	-	99	70.330	ENSPKIG00000007169	imp3	99	70.330	Paramormyrops_kingsleyae
ENSSBOG00000006542	-	100	60.541	ENSPMGG00000009379	imp3	100	60.541	Periophthalmus_magnuspinnatus
ENSSBOG00000006542	-	100	96.739	ENSPEMG00000013003	Imp3	100	96.739	Peromyscus_maniculatus_bairdii
ENSSBOG00000006542	-	100	69.022	ENSPFOG00000016529	imp3	100	69.022	Poecilia_formosa
ENSSBOG00000006542	-	100	69.022	ENSPLAG00000013831	imp3	100	69.022	Poecilia_latipinna
ENSSBOG00000006542	-	99	69.231	ENSPMEG00000000797	imp3	99	69.231	Poecilia_mexicana
ENSSBOG00000006542	-	100	69.565	ENSPREG00000006885	imp3	100	69.565	Poecilia_reticulata
ENSSBOG00000006542	-	100	98.370	ENSPPYG00000006664	IMP3	100	98.370	Pongo_abelii
ENSSBOG00000006542	-	100	97.283	ENSPCAG00000006920	IMP3	100	97.283	Procavia_capensis
ENSSBOG00000006542	-	100	98.913	ENSPCOG00000012367	IMP3	100	98.913	Propithecus_coquereli
ENSSBOG00000006542	-	100	98.370	ENSPVAG00000010036	IMP3	100	98.370	Pteropus_vampyrus
ENSSBOG00000006542	-	100	70.109	ENSPNYG00000000324	imp3	100	70.109	Pundamilia_nyererei
ENSSBOG00000006542	-	99	71.429	ENSPNAG00000017113	imp3	99	71.429	Pygocentrus_nattereri
ENSSBOG00000006542	-	100	96.196	ENSRNOG00000017460	Imp3	100	96.196	Rattus_norvegicus
ENSSBOG00000006542	-	100	98.370	ENSRBIG00000024522	IMP3	100	98.370	Rhinopithecus_bieti
ENSSBOG00000006542	-	100	98.370	ENSRROG00000024157	IMP3	100	98.370	Rhinopithecus_roxellana
ENSSBOG00000006542	-	99	53.552	YHR148W	-	99	53.552	Saccharomyces_cerevisiae
ENSSBOG00000006542	-	99	86.885	ENSSHAG00000006200	IMP3	99	86.885	Sarcophilus_harrisii
ENSSBOG00000006542	-	99	71.429	ENSSFOG00015012483	imp3	99	71.429	Scleropages_formosus
ENSSBOG00000006542	-	100	69.022	ENSSMAG00000007865	imp3	100	69.022	Scophthalmus_maximus
ENSSBOG00000006542	-	100	69.565	ENSSDUG00000010594	imp3	100	69.565	Seriola_dumerili
ENSSBOG00000006542	-	100	68.478	ENSSLDG00000015587	imp3	100	68.478	Seriola_lalandi_dorsalis
ENSSBOG00000006542	-	100	98.370	ENSSARG00000009657	IMP3	100	98.370	Sorex_araneus
ENSSBOG00000006542	-	100	68.478	ENSSPAG00000002088	imp3	100	68.478	Stegastes_partitus
ENSSBOG00000006542	-	100	64.324	ENSTGUG00000013228	IMP3	100	64.324	Taeniopygia_guttata
ENSSBOG00000006542	-	99	69.231	ENSTRUG00000025783	imp3	99	69.231	Takifugu_rubripes
ENSSBOG00000006542	-	100	98.913	ENSUAMG00000022724	IMP3	100	98.913	Ursus_americanus
ENSSBOG00000006542	-	100	98.913	ENSUMAG00000003736	IMP3	100	98.913	Ursus_maritimus
ENSSBOG00000006542	-	100	95.652	ENSVVUG00000019589	IMP3	100	95.652	Vulpes_vulpes
ENSSBOG00000006542	-	96	67.045	ENSXCOG00000007392	imp3	96	67.045	Xiphophorus_couchianus
ENSSBOG00000006542	-	100	68.478	ENSXMAG00000023049	imp3	100	68.478	Xiphophorus_maculatus