EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000008081 (Gene tree)
Gene ID: 101028170
Gene Symbol: RNASEH2B
Alias: AGS2|DLEU8|FLJ11712
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 60404 bases
Position: chrJH378126.1:389039-449442
Accession: 25671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000001659	RNase_H2-Ydr279	PF09468.10	1.2e-15	1	1
ENSSBOP00000001684	RNase_H2-Ydr279	PF09468.10	1.3e-15	1	1
ENSSBOP00000001692	RNase_H2-Ydr279	PF09468.10	2.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000009503	RNASEH2B-201	2506	XM_010337901	ENSSBOP00000001659	254 (aa)	XP_010336203	A0A2K6S2N9
ENSSBOT00000009772	RNASEH2B-203	1583	XM_010337898	ENSSBOP00000001692	279 (aa)	XP_010336200	A0A2K6S2T1
ENSSBOT00000009739	RNASEH2B-202	915	XM_010337896	ENSSBOP00000001684	304 (aa)	XP_010336198	A0A2K6S2R1

Gene Model

Click here to download ENSSBOG00000008081's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000008081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000008081	RNASEH2B	100	96.416	ENSG00000136104	RNASEH2B	100	96.063	Homo_sapiens
ENSSBOG00000008081	RNASEH2B	96	52.985	ENSAPOG00000010496	rnaseh2b	90	51.986	Acanthochromis_polyacanthus
ENSSBOG00000008081	RNASEH2B	100	87.234	ENSAMEG00000012040	RNASEH2B	99	86.644	Ailuropoda_melanoleuca
ENSSBOG00000008081	RNASEH2B	92	46.094	ENSACIG00000021991	rnaseh2b	95	45.918	Amphilophus_citrinellus
ENSSBOG00000008081	RNASEH2B	96	52.239	ENSAOCG00000013398	rnaseh2b	90	50.903	Amphiprion_ocellaris
ENSSBOG00000008081	RNASEH2B	96	52.239	ENSAPEG00000006033	rnaseh2b	90	50.903	Amphiprion_percula
ENSSBOG00000008081	RNASEH2B	97	53.676	ENSATEG00000008370	rnaseh2b	89	53.676	Anabas_testudineus
ENSSBOG00000008081	RNASEH2B	92	65.370	ENSAPLG00000008955	RNASEH2B	99	65.056	Anas_platyrhynchos
ENSSBOG00000008081	RNASEH2B	97	61.172	ENSACAG00000011679	RNASEH2B	96	60.000	Anolis_carolinensis
ENSSBOG00000008081	RNASEH2B	100	97.638	ENSANAG00000020662	RNASEH2B	100	97.638	Aotus_nancymaae
ENSSBOG00000008081	RNASEH2B	96	50.929	ENSACLG00000000467	rnaseh2b	88	50.929	Astatotilapia_calliptera
ENSSBOG00000008081	RNASEH2B	96	54.275	ENSAMXG00000014351	rnaseh2b	88	54.275	Astyanax_mexicanus
ENSSBOG00000008081	RNASEH2B	99	84.892	ENSBTAG00000020149	RNASEH2B	98	83.882	Bos_taurus
ENSSBOG00000008081	RNASEH2B	99	97.351	ENSCJAG00000008585	-	100	97.351	Callithrix_jacchus
ENSSBOG00000008081	RNASEH2B	96	95.082	ENSCJAG00000003822	-	92	95.142	Callithrix_jacchus
ENSSBOG00000008081	RNASEH2B	100	84.946	ENSCAFG00000004295	RNASEH2B	96	81.973	Canis_familiaris
ENSSBOG00000008081	RNASEH2B	100	84.946	ENSCAFG00020000250	RNASEH2B	98	83.333	Canis_lupus_dingo
ENSSBOG00000008081	RNASEH2B	99	85.455	ENSCHIG00000018220	RNASEH2B	98	84.718	Capra_hircus
ENSSBOG00000008081	RNASEH2B	85	75.210	ENSCHIG00000012982	-	84	75.210	Capra_hircus
ENSSBOG00000008081	RNASEH2B	100	90.323	ENSTSYG00000009176	-	93	89.199	Carlito_syrichta
ENSSBOG00000008081	RNASEH2B	98	76.431	ENSTSYG00000031177	-	98	76.431	Carlito_syrichta
ENSSBOG00000008081	RNASEH2B	100	76.868	ENSCAPG00000009978	RNASEH2B	95	77.305	Cavia_aperea
ENSSBOG00000008081	RNASEH2B	100	83.929	ENSCPOG00000032527	RNASEH2B	100	84.646	Cavia_porcellus
ENSSBOG00000008081	RNASEH2B	100	96.416	ENSCCAG00000026979	RNASEH2B	100	96.689	Cebus_capucinus
ENSSBOG00000008081	RNASEH2B	97	95.608	ENSCATG00000031336	RNASEH2B	84	95.608	Cercocebus_atys
ENSSBOG00000008081	RNASEH2B	98	86.447	ENSCLAG00000003517	RNASEH2B	80	83.904	Chinchilla_lanigera
ENSSBOG00000008081	RNASEH2B	100	93.160	ENSCSAG00000017701	RNASEH2B	93	93.160	Chlorocebus_sabaeus
ENSSBOG00000008081	RNASEH2B	99	71.583	ENSCHOG00000013688	RNASEH2B	98	70.627	Choloepus_hoffmanni
ENSSBOG00000008081	RNASEH2B	97	62.731	ENSCPBG00000008684	RNASEH2B	90	60.274	Chrysemys_picta_bellii
ENSSBOG00000008081	RNASEH2B	96	37.676	ENSCING00000016454	-	95	36.304	Ciona_intestinalis
ENSSBOG00000008081	RNASEH2B	100	95.035	ENSCANG00000041511	-	100	94.553	Colobus_angolensis_palliatus
ENSSBOG00000008081	RNASEH2B	100	83.154	ENSCGRG00001000611	Rnaseh2b	99	82.237	Cricetulus_griseus_chok1gshd
ENSSBOG00000008081	RNASEH2B	100	83.154	ENSCGRG00000006077	Rnaseh2b	99	82.237	Cricetulus_griseus_crigri
ENSSBOG00000008081	RNASEH2B	96	52.612	ENSCSEG00000004910	rnaseh2b	90	52.918	Cynoglossus_semilaevis
ENSSBOG00000008081	RNASEH2B	96	51.493	ENSCVAG00000005212	rnaseh2b	90	50.181	Cyprinodon_variegatus
ENSSBOG00000008081	RNASEH2B	96	52.222	ENSDARG00000005128	rnaseh2b	94	49.827	Danio_rerio
ENSSBOG00000008081	RNASEH2B	99	77.818	ENSDNOG00000034290	-	98	75.748	Dasypus_novemcinctus
ENSSBOG00000008081	RNASEH2B	100	75.269	ENSDNOG00000049666	-	92	75.887	Dasypus_novemcinctus
ENSSBOG00000008081	RNASEH2B	100	86.380	ENSDORG00000010708	Rnaseh2b	98	85.197	Dipodomys_ordii
ENSSBOG00000008081	RNASEH2B	87	30.657	FBgn0030507	CG11164	79	30.657	Drosophila_melanogaster
ENSSBOG00000008081	RNASEH2B	91	39.453	ENSEBUG00000005965	rnaseh2b	97	40.234	Eptatretus_burgeri
ENSSBOG00000008081	RNASEH2B	100	90.681	ENSEASG00005017323	RNASEH2B	98	88.487	Equus_asinus_asinus
ENSSBOG00000008081	RNASEH2B	100	89.964	ENSECAG00000014262	RNASEH2B	100	86.614	Equus_caballus
ENSSBOG00000008081	RNASEH2B	96	51.111	ENSELUG00000019560	rnaseh2b	93	48.958	Esox_lucius
ENSSBOG00000008081	RNASEH2B	95	89.474	ENSFCAG00000014257	RNASEH2B	92	88.014	Felis_catus
ENSSBOG00000008081	RNASEH2B	96	62.082	ENSFALG00000008435	RNASEH2B	94	61.011	Ficedula_albicollis
ENSSBOG00000008081	RNASEH2B	100	84.588	ENSFDAG00000009920	RNASEH2B	98	84.397	Fukomys_damarensis
ENSSBOG00000008081	RNASEH2B	96	52.985	ENSFHEG00000012160	rnaseh2b	87	52.985	Fundulus_heteroclitus
ENSSBOG00000008081	RNASEH2B	92	50.190	ENSGMOG00000016830	rnaseh2b	91	50.190	Gadus_morhua
ENSSBOG00000008081	RNASEH2B	92	64.729	ENSGALG00000017015	RNASEH2B	95	61.565	Gallus_gallus
ENSSBOG00000008081	RNASEH2B	96	52.985	ENSGAFG00000021222	rnaseh2b	87	52.985	Gambusia_affinis
ENSSBOG00000008081	RNASEH2B	96	51.095	ENSGACG00000002821	rnaseh2b	90	49.823	Gasterosteus_aculeatus
ENSSBOG00000008081	RNASEH2B	97	63.100	ENSGAGG00000014722	RNASEH2B	97	63.100	Gopherus_agassizii
ENSSBOG00000008081	RNASEH2B	100	95.390	ENSGGOG00000001044	RNASEH2B	100	95.331	Gorilla_gorilla
ENSSBOG00000008081	RNASEH2B	96	51.301	ENSHBUG00000006049	rnaseh2b	89	51.751	Haplochromis_burtoni
ENSSBOG00000008081	RNASEH2B	100	86.380	ENSHGLG00100015953	RNASEH2B	97	86.572	Heterocephalus_glaber_male
ENSSBOG00000008081	RNASEH2B	96	47.955	ENSHCOG00000003318	rnaseh2b	86	51.020	Hippocampus_comes
ENSSBOG00000008081	RNASEH2B	97	53.137	ENSIPUG00000023815	rnaseh2b	88	53.137	Ictalurus_punctatus
ENSSBOG00000008081	RNASEH2B	99	87.770	ENSSTOG00000015126	RNASEH2B	96	88.530	Ictidomys_tridecemlineatus
ENSSBOG00000008081	RNASEH2B	98	84.672	ENSJJAG00000013335	Rnaseh2b	97	83.793	Jaculus_jaculus
ENSSBOG00000008081	RNASEH2B	96	52.985	ENSKMAG00000002198	rnaseh2b	90	51.625	Kryptolebias_marmoratus
ENSSBOG00000008081	RNASEH2B	96	54.851	ENSLBEG00000019331	rnaseh2b	90	53.430	Labrus_bergylta
ENSSBOG00000008081	RNASEH2B	75	61.137	ENSLACG00000010782	RNASEH2B	90	61.435	Latimeria_chalumnae
ENSSBOG00000008081	RNASEH2B	96	56.134	ENSLOCG00000009296	rnaseh2b	95	53.767	Lepisosteus_oculatus
ENSSBOG00000008081	RNASEH2B	99	84.783	ENSLAFG00000030158	RNASEH2B	94	83.505	Loxodonta_africana
ENSSBOG00000008081	RNASEH2B	100	95.699	ENSMFAG00000038464	-	98	95.395	Macaca_fascicularis
ENSSBOG00000008081	RNASEH2B	100	96.457	ENSMMUG00000021746	RNASEH2B	100	96.457	Macaca_mulatta
ENSSBOG00000008081	RNASEH2B	100	95.699	ENSMNEG00000030580	RNASEH2B	98	95.395	Macaca_nemestrina
ENSSBOG00000008081	RNASEH2B	100	95.331	ENSMLEG00000043911	-	100	95.331	Mandrillus_leucophaeus
ENSSBOG00000008081	RNASEH2B	96	53.731	ENSMAMG00000017109	rnaseh2b	87	53.731	Mastacembelus_armatus
ENSSBOG00000008081	RNASEH2B	94	50.951	ENSMZEG00005021926	rnaseh2b	87	50.566	Maylandia_zebra
ENSSBOG00000008081	RNASEH2B	92	63.566	ENSMGAG00000015025	RNASEH2B	98	61.348	Meleagris_gallopavo
ENSSBOG00000008081	RNASEH2B	99	82.014	ENSMAUG00000016520	Rnaseh2b	99	80.263	Mesocricetus_auratus
ENSSBOG00000008081	RNASEH2B	100	91.398	ENSMICG00000000528	RNASEH2B	99	90.789	Microcebus_murinus
ENSSBOG00000008081	RNASEH2B	96	53.358	ENSMMOG00000019799	rnaseh2b	93	53.358	Mola_mola
ENSSBOG00000008081	RNASEH2B	97	69.004	ENSMODG00000010775	RNASEH2B	96	65.646	Monodelphis_domestica
ENSSBOG00000008081	RNASEH2B	97	51.838	ENSMALG00000004463	rnaseh2b	90	51.273	Monopterus_albus
ENSSBOG00000008081	RNASEH2B	100	69.180	MGP_CAROLIEiJ_G0019389	Rnaseh2b	99	69.508	Mus_caroli
ENSSBOG00000008081	RNASEH2B	99	82.909	ENSMUSG00000021932	Rnaseh2b	99	80.984	Mus_musculus
ENSSBOG00000008081	RNASEH2B	100	65.217	MGP_PahariEiJ_G0030407	-	99	64.928	Mus_pahari
ENSSBOG00000008081	RNASEH2B	92	87.554	ENSMPUG00000018010	RNASEH2B	98	87.554	Mustela_putorius_furo
ENSSBOG00000008081	RNASEH2B	100	87.814	ENSMLUG00000004065	-	98	86.842	Myotis_lucifugus
ENSSBOG00000008081	RNASEH2B	96	50.929	ENSNBRG00000003253	rnaseh2b	89	50.370	Neolamprologus_brichardi
ENSSBOG00000008081	RNASEH2B	100	95.035	ENSNLEG00000003804	RNASEH2B	100	94.553	Nomascus_leucogenys
ENSSBOG00000008081	RNASEH2B	98	67.870	ENSMEUG00000003665	RNASEH2B	97	67.021	Notamacropus_eugenii
ENSSBOG00000008081	RNASEH2B	87	64.777	ENSOPRG00000003695	-	78	65.587	Ochotona_princeps
ENSSBOG00000008081	RNASEH2B	86	77.917	ENSODEG00000005412	-	95	77.917	Octodon_degus
ENSSBOG00000008081	RNASEH2B	100	86.022	ENSODEG00000006793	-	98	83.553	Octodon_degus
ENSSBOG00000008081	RNASEH2B	96	48.718	ENSONIG00000006657	rnaseh2b	88	50.186	Oreochromis_niloticus
ENSSBOG00000008081	RNASEH2B	98	65.950	ENSOANG00000015537	RNASEH2B	98	65.493	Ornithorhynchus_anatinus
ENSSBOG00000008081	RNASEH2B	100	84.868	ENSOCUG00000008904	RNASEH2B	96	84.868	Oryctolagus_cuniculus
ENSSBOG00000008081	RNASEH2B	96	52.788	ENSORLG00000011850	rnaseh2b	94	51.049	Oryzias_latipes
ENSSBOG00000008081	RNASEH2B	96	53.532	ENSORLG00020012081	rnaseh2b	94	51.748	Oryzias_latipes_hni
ENSSBOG00000008081	RNASEH2B	96	53.532	ENSORLG00015015468	rnaseh2b	94	51.748	Oryzias_latipes_hsok
ENSSBOG00000008081	RNASEH2B	96	51.866	ENSOMEG00000012441	rnaseh2b	94	50.000	Oryzias_melastigma
ENSSBOG00000008081	RNASEH2B	100	86.525	ENSOGAG00000016486	RNASEH2B	98	85.666	Otolemur_garnettii
ENSSBOG00000008081	RNASEH2B	99	84.727	ENSOARG00000008701	RNASEH2B	96	84.561	Ovis_aries
ENSSBOG00000008081	RNASEH2B	99	94.306	ENSPPAG00000026374	RNASEH2B	100	94.714	Pan_paniscus
ENSSBOG00000008081	RNASEH2B	99	88.172	ENSPPRG00000012450	RNASEH2B	99	86.184	Panthera_pardus
ENSSBOG00000008081	RNASEH2B	99	88.530	ENSPTIG00000013918	RNASEH2B	99	88.530	Panthera_tigris_altaica
ENSSBOG00000008081	RNASEH2B	100	95.331	ENSPTRG00000005886	RNASEH2B	100	95.331	Pan_troglodytes
ENSSBOG00000008081	RNASEH2B	100	94.681	ENSPANG00000022424	-	100	94.553	Papio_anubis
ENSSBOG00000008081	RNASEH2B	96	49.814	ENSPKIG00000013386	rnaseh2b	98	46.358	Paramormyrops_kingsleyae
ENSSBOG00000008081	RNASEH2B	73	58.065	ENSPSIG00000002224	RNASEH2B	86	58.065	Pelodiscus_sinensis
ENSSBOG00000008081	RNASEH2B	72	53.465	ENSPMGG00000010299	rnaseh2b	98	53.465	Periophthalmus_magnuspinnatus
ENSSBOG00000008081	RNASEH2B	100	83.154	ENSPEMG00000019721	Rnaseh2b	99	82.566	Peromyscus_maniculatus_bairdii
ENSSBOG00000008081	RNASEH2B	92	63.320	ENSPCIG00000014535	-	94	60.854	Phascolarctos_cinereus
ENSSBOG00000008081	RNASEH2B	96	53.704	ENSPFOG00000016722	rnaseh2b	87	53.704	Poecilia_formosa
ENSSBOG00000008081	RNASEH2B	96	54.104	ENSPLAG00000011755	rnaseh2b	87	54.104	Poecilia_latipinna
ENSSBOG00000008081	RNASEH2B	96	54.104	ENSPMEG00000002721	rnaseh2b	87	54.104	Poecilia_mexicana
ENSSBOG00000008081	RNASEH2B	96	54.104	ENSPREG00000007737	rnaseh2b	87	54.104	Poecilia_reticulata
ENSSBOG00000008081	RNASEH2B	100	95.390	ENSPPYG00000005378	RNASEH2B	98	92.834	Pongo_abelii
ENSSBOG00000008081	RNASEH2B	100	92.500	ENSPCOG00000026623	RNASEH2B	100	91.765	Propithecus_coquereli
ENSSBOG00000008081	RNASEH2B	88	87.168	ENSPVAG00000000508	RNASEH2B	95	87.352	Pteropus_vampyrus
ENSSBOG00000008081	RNASEH2B	96	51.301	ENSPNYG00000013552	rnaseh2b	89	51.751	Pundamilia_nyererei
ENSSBOG00000008081	RNASEH2B	96	51.852	ENSPNAG00000024825	rnaseh2b	88	51.852	Pygocentrus_nattereri
ENSSBOG00000008081	RNASEH2B	99	82.734	ENSRNOG00000009192	Rnaseh2b	99	81.250	Rattus_norvegicus
ENSSBOG00000008081	RNASEH2B	96	84.015	ENSRBIG00000036017	-	97	79.264	Rhinopithecus_bieti
ENSSBOG00000008081	RNASEH2B	100	95.699	ENSRBIG00000028928	-	100	95.276	Rhinopithecus_bieti
ENSSBOG00000008081	RNASEH2B	96	76.543	ENSRROG00000044915	-	92	76.113	Rhinopithecus_roxellana
ENSSBOG00000008081	RNASEH2B	100	95.699	ENSRROG00000018808	-	100	94.163	Rhinopithecus_roxellana
ENSSBOG00000008081	RNASEH2B	97	69.231	ENSSHAG00000016190	RNASEH2B	96	66.327	Sarcophilus_harrisii
ENSSBOG00000008081	RNASEH2B	96	52.416	ENSSFOG00015010190	rnaseh2b	91	50.538	Scleropages_formosus
ENSSBOG00000008081	RNASEH2B	96	52.045	ENSSMAG00000001546	rnaseh2b	87	52.045	Scophthalmus_maximus
ENSSBOG00000008081	RNASEH2B	96	53.358	ENSSDUG00000007567	rnaseh2b	90	52.364	Seriola_dumerili
ENSSBOG00000008081	RNASEH2B	96	53.160	ENSSLDG00000012485	rnaseh2b	92	51.087	Seriola_lalandi_dorsalis
ENSSBOG00000008081	RNASEH2B	93	61.832	ENSSPUG00000006745	-	94	61.832	Sphenodon_punctatus
ENSSBOG00000008081	RNASEH2B	96	52.985	ENSSPAG00000020926	rnaseh2b	90	51.625	Stegastes_partitus
ENSSBOG00000008081	RNASEH2B	100	86.380	ENSSSCG00000024385	RNASEH2B	100	86.380	Sus_scrofa
ENSSBOG00000008081	RNASEH2B	96	62.454	ENSTGUG00000012104	RNASEH2B	99	62.454	Taeniopygia_guttata
ENSSBOG00000008081	RNASEH2B	96	54.478	ENSTRUG00000015098	rnaseh2b	87	54.478	Takifugu_rubripes
ENSSBOG00000008081	RNASEH2B	96	53.704	ENSTNIG00000013861	rnaseh2b	87	53.704	Tetraodon_nigroviridis
ENSSBOG00000008081	RNASEH2B	100	79.787	ENSTTRG00000010761	RNASEH2B	97	77.961	Tursiops_truncatus
ENSSBOG00000008081	RNASEH2B	100	88.889	ENSUAMG00000022849	RNASEH2B	100	88.889	Ursus_americanus
ENSSBOG00000008081	RNASEH2B	100	87.814	ENSUMAG00000018556	RNASEH2B	100	87.814	Ursus_maritimus
ENSSBOG00000008081	RNASEH2B	100	88.214	ENSVPAG00000005679	RNASEH2B	97	88.571	Vicugna_pacos
ENSSBOG00000008081	RNASEH2B	99	85.091	ENSVVUG00000024015	RNASEH2B	90	81.667	Vulpes_vulpes
ENSSBOG00000008081	RNASEH2B	96	59.630	ENSXETG00000020720	rnaseh2b	95	57.338	Xenopus_tropicalis
ENSSBOG00000008081	RNASEH2B	96	52.416	ENSXCOG00000018732	rnaseh2b	89	52.471	Xiphophorus_couchianus
ENSSBOG00000008081	RNASEH2B	96	54.104	ENSXMAG00000022554	rnaseh2b	87	54.104	Xiphophorus_maculatus