EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSBOG00000009532 (Gene tree)
Gene ID
101045722
Gene Symbol
-
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
-
Gene Type
protein_coding
Species
Saimiri_boliviensis_boliviensis
Status
putative
Strand
Plus strand
Length
44988 bases
Position
chrJH378189.1:7398423-7443410
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSBOP00000001871PABPPF00658.181.3e-2711
ENSSBOP00000001876PABPPF00658.186.9e-2511
ENSSBOP00000001879PABPPF00658.184.7e-2411
ENSSBOP00000001871RRM_5PF13893.61.6e-0911
ENSSBOP00000001871RRM_1PF00076.223.2e-8814
ENSSBOP00000001871RRM_1PF00076.223.2e-8824
ENSSBOP00000001871RRM_1PF00076.223.2e-8834
ENSSBOP00000001871RRM_1PF00076.223.2e-8844
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSBOT00000010846-2132XM_003936410ENSSBOP00000001871614 (aa)XP_003936459A0A2K6S3B6
ENSSBOT00000010875-450-ENSSBOP00000001876149 (aa)-A0A2K6S3C1
ENSSBOT00000010928-516-ENSSBOP00000001879171 (aa)-A0A2K6S3B5
Gene Model
Click here to download ENSSBOG00000009532's gene model file
Pathways
Pathway IDPathway NameSource
sbq03013RNA transportKEGG
sbq03015mRNA surveillance pathwayKEGG
sbq03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000009532's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSBOG00000009532-9879.762ENSSBOG00000020828-10080.357
ENSSBOG00000009532-5531.707ENSSBOG00000034299-6032.484
ENSSBOG00000009532-5733.766ENSSBOG00000025174-5233.766
ENSSBOG00000009532-8969.362ENSSBOG00000025499-9769.362
ENSSBOG00000009532-6136.145ENSSBOG00000028114ELAVL29036.145
ENSSBOG00000009532-5334.444ENSSBOG00000021984CELF37235.616
ENSSBOG00000009532-5730.488ENSSBOG00000034307HNRNPA35230.128
ENSSBOG00000009532-5630.409ENSSBOG00000028408TIAL19730.114
ENSSBOG00000009532-6334.146ENSSBOG00000030047ELAVL39834.146
ENSSBOG00000009532-5630.769ENSSBOG00000020034-7930.769
ENSSBOG00000009532-5630.128ENSSBOG00000021192-5030.128
ENSSBOG00000009532-5436.047ENSSBOG00000028844CELF25436.047
ENSSBOG00000009532-9962.981ENSSBOG00000023677PABPC39862.981
ENSSBOG00000009532-7166.591ENSSBOG00000021975-9566.591
ENSSBOG00000009532-6163.085ENSSBOG00000016382PABPC4L9863.085
ENSSBOG00000009532-9856.716ENSSBOG00000020745-9862.914
ENSSBOG00000009532-5230.645ENSSBOG00000028871ELAVL18232.468
ENSSBOG00000009532-5435.135ENSSBOG00000021912CELF16135.135
ENSSBOG00000009532-9967.690ENSSBOG00000026193PABPC49867.363
ENSSBOG00000009532-9965.719ENSSBOG00000022216PABPC19865.719
ENSSBOG00000009532-8170.968ENSSBOG00000026437-9170.968
ENSSBOG00000009532-6130.263ENSSBOG00000022965ELAVL48930.263
ENSSBOG00000009532-6159.551ENSSBOG00000008658PABPC59659.504
ENSSBOG00000009532-5040.260ENSSBOG00000005354-6640.260
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSBOG00000009532-10096.091ENSG00000101104PABPC1L10096.091Homo_sapiens
ENSSBOG00000009532-9866.667ENSAPOG00000010842pabpc1l9866.827Acanthochromis_polyacanthus
ENSSBOG00000009532-9977.344ENSAMEG00000004099PABPC1L10077.656Ailuropoda_melanoleuca
ENSSBOG00000009532-9869.266ENSACIG00000021004-9969.266Amphilophus_citrinellus
ENSSBOG00000009532-9966.405ENSAOCG00000006167-9966.405Amphiprion_ocellaris
ENSSBOG00000009532-9972.422ENSAPEG00000010558-9780.198Amphiprion_percula
ENSSBOG00000009532-9968.659ENSATEG00000007428pabpc1l9968.659Anabas_testudineus
ENSSBOG00000009532-9873.948ENSAPLG00000008415PABPC1L9874.032Anas_platyrhynchos
ENSSBOG00000009532-9973.836ENSACAG00000011841PABPC1L9873.836Anolis_carolinensis
ENSSBOG00000009532-10098.046ENSANAG00000026826PABPC1L10098.046Aotus_nancymaae
ENSSBOG00000009532-9967.732ENSACLG00000024791pabpc1l9967.732Astatotilapia_calliptera
ENSSBOG00000009532-9969.968ENSAMXG00000013552pabpc1l9969.968Astyanax_mexicanus
ENSSBOG00000009532-6775.439ENSBTAG00000016849PABPC1L8775.439Bos_taurus
ENSSBOG00000009532-5995.833ENSBTAG00000055300-10095.833Bos_taurus
ENSSBOG00000009532-9974.150ENSBTAG00000050862-9173.653Bos_taurus
ENSSBOG00000009532-10098.371ENSCJAG00000017628PABPC1L10098.371Callithrix_jacchus
ENSSBOG00000009532-5776.437ENSCJAG00000038506-10076.437Callithrix_jacchus
ENSSBOG00000009532-9973.652ENSCAFG00000009573PABPC1L10073.652Canis_familiaris
ENSSBOG00000009532-9986.393ENSCAFG00020013828PABPC1L9986.393Canis_lupus_dingo
ENSSBOG00000009532-9785.786ENSCHIG00000025759PABPC1L9384.039Capra_hircus
ENSSBOG00000009532-10086.971ENSTSYG00000006645PABPC1L10086.971Carlito_syrichta
ENSSBOG00000009532-9978.142ENSCAPG00000014519PABPC1L10078.142Cavia_aperea
ENSSBOG00000009532-10081.290ENSCPOG00000013633PABPC1L10081.290Cavia_porcellus
ENSSBOG00000009532-10097.315ENSCCAG00000023338PABPC1L10097.315Cebus_capucinus
ENSSBOG00000009532-10096.091ENSCATG00000034065PABPC1L10096.091Cercocebus_atys
ENSSBOG00000009532-10079.355ENSCLAG00000005298PABPC1L10080.645Chinchilla_lanigera
ENSSBOG00000009532-10095.765ENSCSAG00000014242PABPC1L10095.765Chlorocebus_sabaeus
ENSSBOG00000009532-7281.081ENSCPBG00000017755-9981.081Chrysemys_picta_bellii
ENSSBOG00000009532-5480.769ENSCPBG00000007810-8380.769Chrysemys_picta_bellii
ENSSBOG00000009532-9956.463ENSCPBG00000017765-8456.849Chrysemys_picta_bellii
ENSSBOG00000009532-9750.607ENSCING00000002796-9750.810Ciona_intestinalis
ENSSBOG00000009532-9856.318ENSCSAVG00000003102-10080.822Ciona_savignyi
ENSSBOG00000009532-9868.782ENSCSAVG00000004246-9859.242Ciona_savignyi
ENSSBOG00000009532-10091.172ENSCANG00000037530PABPC1L10091.172Colobus_angolensis_palliatus
ENSSBOG00000009532-9976.786ENSCGRG00001021938Pabpc1l9976.786Cricetulus_griseus_chok1gshd
ENSSBOG00000009532-9976.786ENSCGRG00000007946Pabpc1l9976.786Cricetulus_griseus_crigri
ENSSBOG00000009532-9865.066ENSCSEG00000021295pabpc1l9965.066Cynoglossus_semilaevis
ENSSBOG00000009532-9967.675ENSCVAG00000015943-8685.385Cyprinodon_variegatus
ENSSBOG00000009532-9969.600ENSDARG00000002597pabpc1l8886.154Danio_rerio
ENSSBOG00000009532-9987.439ENSDNOG00000048450PABPC1L9987.439Dasypus_novemcinctus
ENSSBOG00000009532-9984.967ENSDORG00000001067Pabpc1l9984.967Dipodomys_ordii
ENSSBOG00000009532-9589.837ENSETEG00000009969PABPC1L7389.837Echinops_telfairi
ENSSBOG00000009532-10074.497ENSEASG00005023406-9374.667Equus_asinus_asinus
ENSSBOG00000009532-5186.667ENSEASG00005023407-6786.667Equus_asinus_asinus
ENSSBOG00000009532-5994.643ENSEASG00005023408-10094.643Equus_asinus_asinus
ENSSBOG00000009532-6784.783ENSECAG00000040139-8284.783Equus_caballus
ENSSBOG00000009532-9974.830ENSECAG00000022681PABPC1L10073.810Equus_caballus
ENSSBOG00000009532-10082.085ENSEEUG00000005978PABPC1L10082.085Erinaceus_europaeus
ENSSBOG00000009532-9969.745ENSELUG00000001811pabpc1l9969.745Esox_lucius
ENSSBOG00000009532-9987.541ENSFCAG00000011692PABPC1L9987.541Felis_catus
ENSSBOG00000009532-8874.033ENSFALG00000005372PABPC1L9074.033Ficedula_albicollis
ENSSBOG00000009532-10079.741ENSFDAG00000008291PABPC1L10079.741Fukomys_damarensis
ENSSBOG00000009532-9969.218ENSFHEG00000003398pabpc1l9969.218Fundulus_heteroclitus
ENSSBOG00000009532-9967.857ENSGMOG00000004437pabpc1l9867.857Gadus_morhua
ENSSBOG00000009532-9769.244ENSGALG00000004123PABPC1L9982.734Gallus_gallus
ENSSBOG00000009532-9965.231ENSGAFG00000021057pabpc1l9965.231Gambusia_affinis
ENSSBOG00000009532-9967.360ENSGACG00000002792pabpc1l9967.360Gasterosteus_aculeatus
ENSSBOG00000009532-9975.241ENSGAGG00000000589PABPC1L9875.241Gopherus_agassizii
ENSSBOG00000009532-10095.765ENSGGOG00000004584PABPC1L10095.765Gorilla_gorilla
ENSSBOG00000009532-9967.572ENSHBUG00000006134pabpc1l9967.572Haplochromis_burtoni
ENSSBOG00000009532-10081.290ENSHGLG00000008434PABPC1L10081.290Heterocephalus_glaber_female
ENSSBOG00000009532-10081.290ENSHGLG00100012151PABPC1L10081.290Heterocephalus_glaber_male
ENSSBOG00000009532-5981.461ENSHGLG00100019506-10081.461Heterocephalus_glaber_male
ENSSBOG00000009532-9967.159ENSHCOG00000009270pabpc1l9967.159Hippocampus_comes
ENSSBOG00000009532-6062.069ENSIPUG00000006780-8562.069Ictalurus_punctatus
ENSSBOG00000009532-5364.615ENSIPUG00000005537-10064.615Ictalurus_punctatus
ENSSBOG00000009532-5961.494ENSIPUG00000006760-8861.494Ictalurus_punctatus
ENSSBOG00000009532-9970.240ENSIPUG00000012602pabpc1l9970.240Ictalurus_punctatus
ENSSBOG00000009532-10086.808ENSSTOG00000003739PABPC1L10086.808Ictidomys_tridecemlineatus
ENSSBOG00000009532-9968.257ENSJJAG00000022406Pabpc1l9965.139Jaculus_jaculus
ENSSBOG00000009532-9968.447ENSKMAG00000016847pabpc1l9968.447Kryptolebias_marmoratus
ENSSBOG00000009532-9966.345ENSLBEG00000010084pabpc1l9967.036Labrus_bergylta
ENSSBOG00000009532-9968.839ENSLACG00000005762PABPC1L9970.221Latimeria_chalumnae
ENSSBOG00000009532-9969.984ENSLOCG00000007519pabpc1l9869.984Lepisosteus_oculatus
ENSSBOG00000009532-9982.853ENSLAFG00000003553PABPC1L10082.853Loxodonta_africana
ENSSBOG00000009532-10096.580ENSMFAG00000040365PABPC1L10096.580Macaca_fascicularis
ENSSBOG00000009532-9294.161ENSMMUG00000013209-10093.960Macaca_mulatta
ENSSBOG00000009532-10094.165ENSMNEG00000032298PABPC1L10094.165Macaca_nemestrina
ENSSBOG00000009532-10096.091ENSMLEG00000043139PABPC1L10096.091Mandrillus_leucophaeus
ENSSBOG00000009532-9767.705ENSMAMG00000011854pabpc1l9767.705Mastacembelus_armatus
ENSSBOG00000009532-9967.732ENSMZEG00005023713pabpc1l9967.732Maylandia_zebra
ENSSBOG00000009532-9974.718ENSMGAG00000003674PABPC1L9874.718Meleagris_gallopavo
ENSSBOG00000009532-10082.550ENSMICG00000000974-10082.550Microcebus_murinus
ENSSBOG00000009532-9974.277ENSMOCG00000013186Pabpc1l9974.277Microtus_ochrogaster
ENSSBOG00000009532-9967.685ENSMMOG00000020574-9085.385Mola_mola
ENSSBOG00000009532-9778.500ENSMODG00000016198PABPC1L9978.500Monodelphis_domestica
ENSSBOG00000009532-9765.964ENSMALG00000021622pabpc1l10065.964Monopterus_albus
ENSSBOG00000009532-9977.288MGP_CAROLIEiJ_G0024627Pabpc1l9977.288Mus_caroli
ENSSBOG00000009532-9977.288ENSMUSG00000054582Pabpc1l9977.288Mus_musculus
ENSSBOG00000009532-9977.325MGP_PahariEiJ_G0026071Pabpc1l9977.325Mus_pahari
ENSSBOG00000009532-9977.288MGP_SPRETEiJ_G0025549Pabpc1l9977.288Mus_spretus
ENSSBOG00000009532-9985.065ENSMPUG00000017646PABPC1L9985.065Mustela_putorius_furo
ENSSBOG00000009532-9877.419ENSMLUG00000006324PABPC1L9777.419Myotis_lucifugus
ENSSBOG00000009532-9978.444ENSNGAG00000010458Pabpc1l9978.444Nannospalax_galili
ENSSBOG00000009532-9869.794ENSNBRG00000016633pabpc1l9969.794Neolamprologus_brichardi
ENSSBOG00000009532-9393.082ENSNLEG00000006653-10092.262Nomascus_leucogenys
ENSSBOG00000009532-10066.612ENSMEUG00000007905-10066.612Notamacropus_eugenii
ENSSBOG00000009532-10085.528ENSOPRG00000011846PABPC1L10085.528Ochotona_princeps
ENSSBOG00000009532-10073.941ENSODEG00000015482PABPC1L10073.941Octodon_degus
ENSSBOG00000009532-5874.375ENSODEG00000002920-9774.375Octodon_degus
ENSSBOG00000009532-9967.732ENSONIG00000017314pabpc1l9967.732Oreochromis_niloticus
ENSSBOG00000009532-8967.269ENSOANG00000015793-10067.269Ornithorhynchus_anatinus
ENSSBOG00000009532-9979.630ENSOCUG00000003005PABPC1L10079.630Oryctolagus_cuniculus
ENSSBOG00000009532-9771.362ENSORLG00000010322pabpc1l9971.362Oryzias_latipes
ENSSBOG00000009532-9771.362ENSORLG00020021193pabpc1l9971.362Oryzias_latipes_hni
ENSSBOG00000009532-9771.362ENSORLG00015017018pabpc1l9971.362Oryzias_latipes_hsok
ENSSBOG00000009532-9963.830ENSOMEG00000010789pabpc1l9963.830Oryzias_melastigma
ENSSBOG00000009532-9986.218ENSOGAG00000032999PABPC1L10086.218Otolemur_garnettii
ENSSBOG00000009532-9985.902ENSOARG00000004578PABPC1L9985.902Ovis_aries
ENSSBOG00000009532-10095.928ENSPPAG00000039677PABPC1L10095.928Pan_paniscus
ENSSBOG00000009532-9979.054ENSPPRG00000020242-10079.054Panthera_pardus
ENSSBOG00000009532-6380.556ENSPPRG00000019327-9880.556Panthera_pardus
ENSSBOG00000009532-9987.294ENSPTIG00000006524PABPC1L10087.294Panthera_tigris_altaica
ENSSBOG00000009532-6396.605ENSPTRG00000013531PABPC1L9996.605Pan_troglodytes
ENSSBOG00000009532-9394.969ENSPTRG00000044192-10094.152Pan_troglodytes
ENSSBOG00000009532-10096.091ENSPANG00000018788PABPC1L10096.091Papio_anubis
ENSSBOG00000009532-9970.144ENSPKIG00000007322pabpc1l9970.144Paramormyrops_kingsleyae
ENSSBOG00000009532-5381.679ENSPKIG00000016810-9381.679Paramormyrops_kingsleyae
ENSSBOG00000009532-6882.254ENSPSIG00000013289PABPC1L9982.254Pelodiscus_sinensis
ENSSBOG00000009532-6385.606ENSPMGG00000023117pabpc1l9285.606Periophthalmus_magnuspinnatus
ENSSBOG00000009532-7267.337ENSPMGG00000023121-9367.337Periophthalmus_magnuspinnatus
ENSSBOG00000009532-9975.777ENSPEMG00000020671Pabpc1l9976.144Peromyscus_maniculatus_bairdii
ENSSBOG00000009532-9968.882ENSPFOG00000013241pabpc1l9968.608Poecilia_formosa
ENSSBOG00000009532-9968.447ENSPLAG00000017490-9968.447Poecilia_latipinna
ENSSBOG00000009532-5386.154ENSPLAG00000023686-9286.154Poecilia_latipinna
ENSSBOG00000009532-9968.831ENSPMEG00000007677pabpc1l9968.831Poecilia_mexicana
ENSSBOG00000009532-5386.154ENSPMEG00000009185-8886.154Poecilia_mexicana
ENSSBOG00000009532-6775.787ENSPREG00000015886pabpc1l9975.787Poecilia_reticulata
ENSSBOG00000009532-5281.818ENSPREG00000015197-7380.000Poecilia_reticulata
ENSSBOG00000009532-10095.928ENSPPYG00000011042PABPC1L10095.928Pongo_abelii
ENSSBOG00000009532-6292.188ENSPCAG00000011787-7592.188Procavia_capensis
ENSSBOG00000009532-9987.809ENSPCOG00000020630PABPC1L9987.809Propithecus_coquereli
ENSSBOG00000009532-9983.934ENSPVAG00000012663PABPC1L9983.934Pteropus_vampyrus
ENSSBOG00000009532-9869.794ENSPNYG00000004101pabpc1l9969.794Pundamilia_nyererei
ENSSBOG00000009532-9963.200ENSPNAG00000021248pabpc1l9963.200Pygocentrus_nattereri
ENSSBOG00000009532-9975.851ENSRNOG00000012750Pabpc1l10076.337Rattus_norvegicus
ENSSBOG00000009532-10095.765ENSRBIG00000035381PABPC1L10095.765Rhinopithecus_bieti
ENSSBOG00000009532-10095.765ENSRROG00000044498PABPC1L10095.765Rhinopithecus_roxellana
ENSSBOG00000009532-9772.188ENSSHAG00000011446PABPC1L10072.188Sarcophilus_harrisii
ENSSBOG00000009532-9970.833ENSSFOG00015017304pabpc1l9970.833Scleropages_formosus
ENSSBOG00000009532-9967.091ENSSMAG00000010516pabpc1l9886.822Scophthalmus_maximus
ENSSBOG00000009532-9967.512ENSSDUG00000014743pabpc1l9967.512Seriola_dumerili
ENSSBOG00000009532-9972.902ENSSLDG00000006981pabpc1l9876.256Seriola_lalandi_dorsalis
ENSSBOG00000009532-9973.194ENSSPUG00000004233PABPC1L9873.194Sphenodon_punctatus
ENSSBOG00000009532-9965.455ENSSPAG00000017137pabpc1l9965.455Stegastes_partitus
ENSSBOG00000009532-9984.539ENSSSCG00000007382PABPC1L9984.539Sus_scrofa
ENSSBOG00000009532-9973.312ENSTGUG00000005114PABPC1L9973.312Taeniopygia_guttata
ENSSBOG00000009532-9766.558ENSTRUG00000011085pabpc1l9766.558Takifugu_rubripes
ENSSBOG00000009532-9965.335ENSTNIG00000017903pabpc1l9865.335Tetraodon_nigroviridis
ENSSBOG00000009532-9492.808ENSTBEG00000002851PABPC1L8092.808Tupaia_belangeri
ENSSBOG00000009532-9484.722ENSTTRG00000007618PABPC1L10084.797Tursiops_truncatus
ENSSBOG00000009532-9984.020ENSUAMG00000017682PABPC1L9984.020Ursus_americanus
ENSSBOG00000009532-6788.889ENSUMAG00000025436PABPC1L9488.889Ursus_maritimus
ENSSBOG00000009532-9891.304ENSVVUG00000018939PABPC1L9991.304Vulpes_vulpes
ENSSBOG00000009532-9969.551ENSXETG00000022831pabpc1l9869.551Xenopus_tropicalis
ENSSBOG00000009532-9969.067ENSXCOG00000005459pabpc1l9981.560Xiphophorus_couchianus
ENSSBOG00000009532-9968.608ENSXMAG00000017135pabpc1l9968.608Xiphophorus_maculatus

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