EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000010664 (Gene tree)
Gene ID: 101052114
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 46094 bases
Position: chrJH378118.1:33553911-33600004
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000002116	zf-CCCH	PF00642.24	0.00028	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000012228	RC3H1-201	3000	XM_010336175	ENSSBOP00000002116	999 (aa)	XP_010334477	A0A2K6S3Z6

Gene Model

Click here to download ENSSBOG00000010664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000010664's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000010664	RC3H1	90	54.131	ENSSBOG00000029100	RC3H2	78	83.511

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000010664	RC3H1	100	93.702	ENSG00000135870	RC3H1	93	93.702	Homo_sapiens
ENSSBOG00000010664	RC3H1	100	90.720	ENSAMEG00000015657	RC3H1	93	88.341	Ailuropoda_melanoleuca
ENSSBOG00000010664	RC3H1	100	81.946	ENSAPLG00000005341	RC3H1	93	79.310	Anas_platyrhynchos
ENSSBOG00000010664	RC3H1	100	79.268	ENSACAG00000015271	RC3H1	93	78.069	Anolis_carolinensis
ENSSBOG00000010664	RC3H1	100	93.188	ENSANAG00000036716	RC3H1	93	90.057	Aotus_nancymaae
ENSSBOG00000010664	RC3H1	100	91.126	ENSBTAG00000052708	RC3H1	93	91.126	Bos_taurus
ENSSBOG00000010664	RC3H1	100	93.094	ENSCJAG00000009106	RC3H1	93	89.962	Callithrix_jacchus
ENSSBOG00000010664	RC3H1	100	91.004	ENSCAFG00000014434	RC3H1	93	87.962	Canis_familiaris
ENSSBOG00000010664	RC3H1	100	90.918	ENSCAFG00020017112	RC3H1	93	87.879	Canis_lupus_dingo
ENSSBOG00000010664	RC3H1	100	91.595	ENSCHIG00000002873	RC3H1	93	91.595	Capra_hircus
ENSSBOG00000010664	RC3H1	99	89.489	ENSTSYG00000003913	RC3H1	93	88.185	Carlito_syrichta
ENSSBOG00000010664	RC3H1	100	85.147	ENSCPOG00000004349	RC3H1	93	83.822	Cavia_porcellus
ENSSBOG00000010664	RC3H1	100	93.110	ENSCCAG00000025652	RC3H1	93	93.110	Cebus_capucinus
ENSSBOG00000010664	RC3H1	100	92.621	ENSCATG00000033497	RC3H1	93	89.583	Cercocebus_atys
ENSSBOG00000010664	RC3H1	100	88.553	ENSCLAG00000011267	RC3H1	93	87.417	Chinchilla_lanigera
ENSSBOG00000010664	RC3H1	95	97.403	ENSCSAG00000011823	RC3H1	77	92.727	Chlorocebus_sabaeus
ENSSBOG00000010664	RC3H1	100	88.668	ENSCPBG00000014670	RC3H1	93	95.822	Chrysemys_picta_bellii
ENSSBOG00000010664	RC3H1	100	92.715	ENSCANG00000032120	RC3H1	93	89.404	Colobus_angolensis_palliatus
ENSSBOG00000010664	RC3H1	100	88.542	ENSCGRG00001020812	Rc3h1	93	84.325	Cricetulus_griseus_chok1gshd
ENSSBOG00000010664	RC3H1	100	88.542	ENSCGRG00000011952	Rc3h1	93	84.325	Cricetulus_griseus_crigri
ENSSBOG00000010664	RC3H1	62	94.516	ENSDNOG00000011494	RC3H1	99	94.516	Dasypus_novemcinctus
ENSSBOG00000010664	RC3H1	100	89.573	ENSDORG00000004855	Rc3h1	93	85.175	Dipodomys_ordii
ENSSBOG00000010664	RC3H1	92	96.168	ENSETEG00000012064	RC3H1	87	96.168	Echinops_telfairi
ENSSBOG00000010664	RC3H1	100	91.882	ENSEASG00005017000	RC3H1	93	91.882	Equus_asinus_asinus
ENSSBOG00000010664	RC3H1	100	96.096	ENSECAG00000021208	RC3H1	93	96.096	Equus_caballus
ENSSBOG00000010664	RC3H1	88	80.952	ENSEEUG00000014861	RC3H1	79	80.952	Erinaceus_europaeus
ENSSBOG00000010664	RC3H1	100	91.296	ENSFCAG00000014924	RC3H1	93	89.299	Felis_catus
ENSSBOG00000010664	RC3H1	100	80.600	ENSFALG00000002947	RC3H1	93	77.218	Ficedula_albicollis
ENSSBOG00000010664	RC3H1	100	88.647	ENSFDAG00000013303	RC3H1	93	84.637	Fukomys_damarensis
ENSSBOG00000010664	RC3H1	100	86.282	ENSGALG00000004587	RC3H1	93	86.282	Gallus_gallus
ENSSBOG00000010664	RC3H1	100	87.686	ENSGAGG00000018194	RC3H1	93	87.984	Gopherus_agassizii
ENSSBOG00000010664	RC3H1	100	86.877	ENSGGOG00000005735	RC3H1	93	86.877	Gorilla_gorilla
ENSSBOG00000010664	RC3H1	86	86.858	ENSHGLG00000004183	-	92	86.798	Heterocephalus_glaber_female
ENSSBOG00000010664	RC3H1	100	88.079	ENSHGLG00100008577	RC3H1	93	84.543	Heterocephalus_glaber_male
ENSSBOG00000010664	RC3H1	100	89.773	ENSSTOG00000016033	RC3H1	93	86.850	Ictidomys_tridecemlineatus
ENSSBOG00000010664	RC3H1	100	89.839	ENSJJAG00000018915	Rc3h1	93	87.121	Jaculus_jaculus
ENSSBOG00000010664	RC3H1	100	69.541	ENSLACG00000016186	RC3H1	92	75.799	Latimeria_chalumnae
ENSSBOG00000010664	RC3H1	96	91.185	ENSLAFG00000004367	RC3H1	90	91.507	Loxodonta_africana
ENSSBOG00000010664	RC3H1	100	97.294	ENSMFAG00000033725	RC3H1	93	89.489	Macaca_fascicularis
ENSSBOG00000010664	RC3H1	100	93.702	ENSMMUG00000000630	RC3H1	93	93.702	Macaca_mulatta
ENSSBOG00000010664	RC3H1	100	92.526	ENSMNEG00000035968	RC3H1	93	89.583	Macaca_nemestrina
ENSSBOG00000010664	RC3H1	100	92.431	ENSMLEG00000037455	RC3H1	93	89.489	Mandrillus_leucophaeus
ENSSBOG00000010664	RC3H1	100	90.190	ENSMAUG00000020864	Rc3h1	93	89.690	Mesocricetus_auratus
ENSSBOG00000010664	RC3H1	100	91.098	ENSMICG00000003000	RC3H1	93	87.252	Microcebus_murinus
ENSSBOG00000010664	RC3H1	100	87.500	ENSMOCG00000016587	Rc3h1	98	84.608	Microtus_ochrogaster
ENSSBOG00000010664	RC3H1	100	85.917	ENSMODG00000004289	RC3H1	93	84.354	Monodelphis_domestica
ENSSBOG00000010664	RC3H1	100	87.973	MGP_CAROLIEiJ_G0014756	Rc3h1	93	84.201	Mus_caroli
ENSSBOG00000010664	RC3H1	100	88.730	ENSMUSG00000040423	Rc3h1	93	88.252	Mus_musculus
ENSSBOG00000010664	RC3H1	100	87.311	MGP_PahariEiJ_G0027992	Rc3h1	93	84.768	Mus_pahari
ENSSBOG00000010664	RC3H1	100	88.539	MGP_SPRETEiJ_G0015563	Rc3h1	93	88.061	Mus_spretus
ENSSBOG00000010664	RC3H1	100	90.539	ENSMPUG00000004747	RC3H1	93	86.919	Mustela_putorius_furo
ENSSBOG00000010664	RC3H1	100	89.110	ENSMLUG00000011127	RC3H1	93	86.825	Myotis_lucifugus
ENSSBOG00000010664	RC3H1	100	89.678	ENSNGAG00000011135	Rc3h1	93	85.364	Nannospalax_galili
ENSSBOG00000010664	RC3H1	100	92.242	ENSNLEG00000015327	RC3H1	93	89.205	Nomascus_leucogenys
ENSSBOG00000010664	RC3H1	96	82.016	ENSOPRG00000013068	RC3H1	90	79.232	Ochotona_princeps
ENSSBOG00000010664	RC3H1	100	88.553	ENSODEG00000014185	RC3H1	93	84.543	Octodon_degus
ENSSBOG00000010664	RC3H1	100	89.818	ENSOANG00000000924	RC3H1	93	82.183	Ornithorhynchus_anatinus
ENSSBOG00000010664	RC3H1	98	89.615	ENSOCUG00000004930	RC3H1	92	86.481	Oryctolagus_cuniculus
ENSSBOG00000010664	RC3H1	100	83.365	ENSOGAG00000004044	RC3H1	93	79.453	Otolemur_garnettii
ENSSBOG00000010664	RC3H1	100	89.840	ENSOARG00000013011	RC3H1	93	86.077	Ovis_aries
ENSSBOG00000010664	RC3H1	100	92.526	ENSPPAG00000039253	RC3H1	93	89.215	Pan_paniscus
ENSSBOG00000010664	RC3H1	100	92.741	ENSPPRG00000009007	RC3H1	93	92.741	Panthera_pardus
ENSSBOG00000010664	RC3H1	100	91.046	ENSPTIG00000015326	RC3H1	93	87.925	Panthera_tigris_altaica
ENSSBOG00000010664	RC3H1	100	92.526	ENSPTRG00000001702	RC3H1	93	89.215	Pan_troglodytes
ENSSBOG00000010664	RC3H1	100	92.431	ENSPANG00000008886	RC3H1	93	89.489	Papio_anubis
ENSSBOG00000010664	RC3H1	100	84.360	ENSPSIG00000016181	RC3H1	93	84.645	Pelodiscus_sinensis
ENSSBOG00000010664	RC3H1	100	87.784	ENSPEMG00000011966	Rc3h1	93	83.853	Peromyscus_maniculatus_bairdii
ENSSBOG00000010664	RC3H1	74	91.316	ENSPCIG00000002058	RC3H1	89	92.987	Phascolarctos_cinereus
ENSSBOG00000010664	RC3H1	100	93.805	ENSPPYG00000000490	RC3H1	93	93.805	Pongo_abelii
ENSSBOG00000010664	RC3H1	86	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSSBOG00000010664	RC3H1	88	89.850	ENSPCOG00000021795	RC3H1	96	85.517	Propithecus_coquereli
ENSSBOG00000010664	RC3H1	93	100.000	ENSPVAG00000007593	RC3H1	93	78.673	Pteropus_vampyrus
ENSSBOG00000010664	RC3H1	97	57.749	ENSPNAG00000023439	rc3h1a	79	91.553	Pygocentrus_nattereri
ENSSBOG00000010664	RC3H1	100	92.715	ENSRBIG00000037743	RC3H1	93	90.161	Rhinopithecus_bieti
ENSSBOG00000010664	RC3H1	100	92.431	ENSRROG00000036546	RC3H1	93	90.057	Rhinopithecus_roxellana
ENSSBOG00000010664	RC3H1	100	90.476	ENSSHAG00000007589	RC3H1	93	83.427	Sarcophilus_harrisii
ENSSBOG00000010664	RC3H1	81	94.785	ENSSARG00000004660	RC3H1	76	94.785	Sorex_araneus
ENSSBOG00000010664	RC3H1	100	77.987	ENSSPUG00000018472	RC3H1	93	75.399	Sphenodon_punctatus
ENSSBOG00000010664	RC3H1	100	96.597	ENSSSCG00000015498	RC3H1	93	96.597	Sus_scrofa
ENSSBOG00000010664	RC3H1	100	80.903	ENSTGUG00000004090	RC3H1	93	77.298	Taeniopygia_guttata
ENSSBOG00000010664	RC3H1	95	89.234	ENSTBEG00000005015	RC3H1	84	89.234	Tupaia_belangeri
ENSSBOG00000010664	RC3H1	100	96.923	ENSTTRG00000008572	RC3H1	93	88.396	Tursiops_truncatus
ENSSBOG00000010664	RC3H1	100	90.152	ENSUAMG00000019525	RC3H1	93	87.109	Ursus_americanus
ENSSBOG00000010664	RC3H1	100	90.814	ENSUMAG00000020087	RC3H1	93	87.595	Ursus_maritimus
ENSSBOG00000010664	RC3H1	90	98.365	ENSVPAG00000002591	RC3H1	85	98.365	Vicugna_pacos
ENSSBOG00000010664	RC3H1	100	90.660	ENSVVUG00000014201	RC3H1	93	87.630	Vulpes_vulpes
ENSSBOG00000010664	RC3H1	100	72.923	ENSXETG00000020030	rc3h1	93	72.430	Xenopus_tropicalis