EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000012308 (Gene tree)
Gene ID: 101032677
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 34111 bases
Position: chrJH378107.1:7624847-7658957
Accession: 21863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000002371	RRM_1	PF00076.22	2.2e-48	1	3
ENSSBOP00000002371	RRM_1	PF00076.22	2.2e-48	2	3
ENSSBOP00000002371	RRM_1	PF00076.22	2.2e-48	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000013611	RBM28-201	1923	XM_010346297	ENSSBOP00000002371	640 (aa)	XP_010344599	A0A2K6S4R6

Gene Model

Click here to download ENSSBOG00000012308's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000012308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000012308	RBM28	100	90.289	ENSG00000106344	RBM28	82	100.000	Homo_sapiens
ENSSBOG00000012308	RBM28	75	58.447	ENSAPOG00000015512	rbm28	86	45.813	Acanthochromis_polyacanthus
ENSSBOG00000012308	RBM28	100	92.391	ENSAMEG00000004776	RBM28	79	92.391	Ailuropoda_melanoleuca
ENSSBOG00000012308	RBM28	74	59.434	ENSAOCG00000000462	rbm28	91	46.782	Amphiprion_ocellaris
ENSSBOG00000012308	RBM28	76	57.269	ENSAPEG00000012996	rbm28	91	47.165	Amphiprion_percula
ENSSBOG00000012308	RBM28	73	59.024	ENSATEG00000001672	rbm28	65	58.537	Anabas_testudineus
ENSSBOG00000012308	RBM28	100	94.488	ENSANAG00000033922	RBM28	85	94.488	Aotus_nancymaae
ENSSBOG00000012308	RBM28	100	47.917	ENSACLG00000025024	rbm28	86	47.396	Astatotilapia_calliptera
ENSSBOG00000012308	RBM28	78	100.000	ENSBTAG00000017001	RBM28	96	100.000	Bos_taurus
ENSSBOG00000012308	RBM28	100	93.701	ENSCJAG00000017731	RBM28	91	91.864	Callithrix_jacchus
ENSSBOG00000012308	RBM28	100	79.058	ENSCAFG00000001667	RBM28	85	76.963	Canis_familiaris
ENSSBOG00000012308	RBM28	100	79.058	ENSCAFG00020021648	RBM28	85	76.963	Canis_lupus_dingo
ENSSBOG00000012308	RBM28	100	78.272	ENSCHIG00000014146	RBM28	91	78.796	Capra_hircus
ENSSBOG00000012308	RBM28	100	80.577	ENSTSYG00000002892	RBM28	96	95.000	Carlito_syrichta
ENSSBOG00000012308	RBM28	100	77.487	ENSCPOG00000006253	RBM28	85	77.487	Cavia_porcellus
ENSSBOG00000012308	RBM28	100	93.963	ENSCCAG00000035105	RBM28	85	92.651	Cebus_capucinus
ENSSBOG00000012308	RBM28	100	88.714	ENSCATG00000040497	RBM28	82	97.500	Cercocebus_atys
ENSSBOG00000012308	RBM28	100	68.690	ENSCLAG00000003707	RBM28	85	72.401	Chinchilla_lanigera
ENSSBOG00000012308	RBM28	100	88.976	ENSCSAG00000010161	RBM28	85	87.664	Chlorocebus_sabaeus
ENSSBOG00000012308	RBM28	100	88.714	ENSCANG00000038397	RBM28	87	100.000	Colobus_angolensis_palliatus
ENSSBOG00000012308	RBM28	93	87.946	ENSCGRG00001021278	Rbm28	91	76.190	Cricetulus_griseus_chok1gshd
ENSSBOG00000012308	RBM28	100	60.157	ENSCGRG00000005098	Rbm28	100	59.502	Cricetulus_griseus_crigri
ENSSBOG00000012308	RBM28	100	45.812	ENSCSEG00000004212	rbm28	91	44.473	Cynoglossus_semilaevis
ENSSBOG00000012308	RBM28	73	56.604	ENSCVAG00000010493	rbm28	88	44.286	Cyprinodon_variegatus
ENSSBOG00000012308	RBM28	100	52.970	ENSDARG00000025332	rbm28	92	51.485	Danio_rerio
ENSSBOG00000012308	RBM28	100	80.890	ENSDNOG00000001124	RBM28	91	79.319	Dasypus_novemcinctus
ENSSBOG00000012308	RBM28	57	71.681	ENSDORG00000004184	Rbm28	76	73.477	Dipodomys_ordii
ENSSBOG00000012308	RBM28	99	64.858	ENSETEG00000007130	RBM28	90	65.891	Echinops_telfairi
ENSSBOG00000012308	RBM28	78	52.703	ENSEBUG00000004419	rbm28	92	37.531	Eptatretus_burgeri
ENSSBOG00000012308	RBM28	100	80.208	ENSEASG00005008528	RBM28	86	80.729	Equus_asinus_asinus
ENSSBOG00000012308	RBM28	100	79.740	ENSECAG00000007745	RBM28	86	80.519	Equus_caballus
ENSSBOG00000012308	RBM28	94	75.291	ENSEEUG00000002389	RBM28	81	74.709	Erinaceus_europaeus
ENSSBOG00000012308	RBM28	100	50.510	ENSELUG00000020602	rbm28	91	49.751	Esox_lucius
ENSSBOG00000012308	RBM28	100	78.796	ENSFCAG00000000946	RBM28	82	100.000	Felis_catus
ENSSBOG00000012308	RBM28	100	78.796	ENSFDAG00000010169	RBM28	91	79.058	Fukomys_damarensis
ENSSBOG00000012308	RBM28	73	58.768	ENSGACG00000012612	rbm28	95	45.146	Gasterosteus_aculeatus
ENSSBOG00000012308	RBM28	78	83.784	ENSGAGG00000008873	RBM28	77	83.784	Gopherus_agassizii
ENSSBOG00000012308	RBM28	94	88.304	ENSGGOG00000004644	RBM28	83	87.135	Gorilla_gorilla
ENSSBOG00000012308	RBM28	89	47.135	ENSHBUG00000009611	rbm28	79	47.668	Haplochromis_burtoni
ENSSBOG00000012308	RBM28	100	79.581	ENSHGLG00000005409	RBM28	85	79.319	Heterocephalus_glaber_female
ENSSBOG00000012308	RBM28	100	78.534	ENSHGLG00100016458	RBM28	85	77.225	Heterocephalus_glaber_male
ENSSBOG00000012308	RBM28	77	48.705	ENSHCOG00000010597	rbm28	64	48.187	Hippocampus_comes
ENSSBOG00000012308	RBM28	100	85.640	ENSSTOG00000002169	RBM28	91	85.901	Ictidomys_tridecemlineatus
ENSSBOG00000012308	RBM28	74	54.464	ENSLBEG00000012998	rbm28	86	46.565	Labrus_bergylta
ENSSBOG00000012308	RBM28	85	63.889	ENSLOCG00000015541	rbm28	73	63.402	Lepisosteus_oculatus
ENSSBOG00000012308	RBM28	100	76.440	ENSLAFG00000010717	RBM28	85	74.430	Loxodonta_africana
ENSSBOG00000012308	RBM28	100	88.451	ENSMFAG00000031036	RBM28	82	97.500	Macaca_fascicularis
ENSSBOG00000012308	RBM28	100	88.976	ENSMMUG00000007250	RBM28	82	97.500	Macaca_mulatta
ENSSBOG00000012308	RBM28	100	86.945	ENSMNEG00000036970	RBM28	82	97.500	Macaca_nemestrina
ENSSBOG00000012308	RBM28	100	76.698	ENSMLEG00000037717	RBM28	100	75.617	Mandrillus_leucophaeus
ENSSBOG00000012308	RBM28	100	47.132	ENSMAMG00000008525	rbm28	85	47.194	Mastacembelus_armatus
ENSSBOG00000012308	RBM28	92	44.663	ENSMZEG00005019625	rbm28	84	44.817	Maylandia_zebra
ENSSBOG00000012308	RBM28	100	74.177	ENSMAUG00000002263	Rbm28	91	74.937	Mesocricetus_auratus
ENSSBOG00000012308	RBM28	92	76.991	ENSMICG00000000107	RBM28	90	78.171	Microcebus_murinus
ENSSBOG00000012308	RBM28	100	76.963	ENSMOCG00000014615	Rbm28	91	76.178	Microtus_ochrogaster
ENSSBOG00000012308	RBM28	100	68.734	ENSMODG00000015151	RBM28	86	69.409	Monodelphis_domestica
ENSSBOG00000012308	RBM28	80	52.066	ENSMALG00000006419	rbm28	86	44.072	Monopterus_albus
ENSSBOG00000012308	RBM28	100	72.324	MGP_CAROLIEiJ_G0028162	Rbm28	91	73.890	Mus_caroli
ENSSBOG00000012308	RBM28	100	74.151	ENSMUSG00000029701	Rbm28	91	74.151	Mus_musculus
ENSSBOG00000012308	RBM28	100	74.674	MGP_PahariEiJ_G0021920	Rbm28	91	74.674	Mus_pahari
ENSSBOG00000012308	RBM28	100	74.413	MGP_SPRETEiJ_G0029162	Rbm28	91	74.413	Mus_spretus
ENSSBOG00000012308	RBM28	100	79.581	ENSMPUG00000006511	RBM28	86	79.581	Mustela_putorius_furo
ENSSBOG00000012308	RBM28	100	80.890	ENSMLUG00000002186	RBM28	86	81.152	Myotis_lucifugus
ENSSBOG00000012308	RBM28	100	75.131	ENSNGAG00000017946	-	85	75.131	Nannospalax_galili
ENSSBOG00000012308	RBM28	100	76.178	ENSNGAG00000006480	-	90	75.916	Nannospalax_galili
ENSSBOG00000012308	RBM28	100	88.976	ENSNLEG00000012307	RBM28	82	100.000	Nomascus_leucogenys
ENSSBOG00000012308	RBM28	74	90.741	ENSMEUG00000009611	RBM28	76	87.500	Notamacropus_eugenii
ENSSBOG00000012308	RBM28	85	71.166	ENSOPRG00000015140	RBM28	71	71.166	Ochotona_princeps
ENSSBOG00000012308	RBM28	75	93.333	ENSODEG00000013217	-	70	93.333	Octodon_degus
ENSSBOG00000012308	RBM28	100	74.346	ENSODEG00000003213	-	85	73.822	Octodon_degus
ENSSBOG00000012308	RBM28	72	59.901	ENSONIG00000014924	rbm28	86	46.939	Oreochromis_niloticus
ENSSBOG00000012308	RBM28	95	58.357	ENSOANG00000000815	-	87	58.263	Ornithorhynchus_anatinus
ENSSBOG00000012308	RBM28	100	79.634	ENSOCUG00000003009	RBM28	86	81.462	Oryctolagus_cuniculus
ENSSBOG00000012308	RBM28	73	56.132	ENSORLG00000009636	rbm28	85	46.875	Oryzias_latipes
ENSSBOG00000012308	RBM28	73	56.604	ENSORLG00020002123	rbm28	85	44.170	Oryzias_latipes_hni
ENSSBOG00000012308	RBM28	99	57.919	ENSORLG00015015030	rbm28	83	56.962	Oryzias_latipes_hsok
ENSSBOG00000012308	RBM28	74	57.870	ENSOMEG00000007801	rbm28	85	45.074	Oryzias_melastigma
ENSSBOG00000012308	RBM28	92	92.500	ENSOGAG00000006011	RBM28	90	92.500	Otolemur_garnettii
ENSSBOG00000012308	RBM28	100	78.182	ENSOARG00000002547	RBM28	91	78.182	Ovis_aries
ENSSBOG00000012308	RBM28	100	90.814	ENSPPAG00000041730	RBM28	82	100.000	Pan_paniscus
ENSSBOG00000012308	RBM28	100	79.058	ENSPPRG00000004420	RBM28	82	100.000	Panthera_pardus
ENSSBOG00000012308	RBM28	100	79.058	ENSPTIG00000008550	RBM28	82	100.000	Panthera_tigris_altaica
ENSSBOG00000012308	RBM28	100	90.814	ENSPTRG00000019659	RBM28	82	100.000	Pan_troglodytes
ENSSBOG00000012308	RBM28	100	89.501	ENSPANG00000022295	RBM28	89	97.500	Papio_anubis
ENSSBOG00000012308	RBM28	99	49.606	ENSPKIG00000023453	rbm28	91	48.294	Paramormyrops_kingsleyae
ENSSBOG00000012308	RBM28	78	67.500	ENSPMGG00000012840	rbm28	82	59.113	Periophthalmus_magnuspinnatus
ENSSBOG00000012308	RBM28	100	73.298	ENSPEMG00000020673	Rbm28	100	56.340	Peromyscus_maniculatus_bairdii
ENSSBOG00000012308	RBM28	93	65.891	ENSPCIG00000012810	RBM28	85	65.633	Phascolarctos_cinereus
ENSSBOG00000012308	RBM28	72	57.214	ENSPFOG00000018209	rbm28	85	44.030	Poecilia_formosa
ENSSBOG00000012308	RBM28	71	57.711	ENSPLAG00000016078	rbm28	87	43.500	Poecilia_latipinna
ENSSBOG00000012308	RBM28	72	58.209	ENSPMEG00000004292	rbm28	85	44.030	Poecilia_mexicana
ENSSBOG00000012308	RBM28	100	89.764	ENSPPYG00000017975	RBM28	85	88.451	Pongo_abelii
ENSSBOG00000012308	RBM28	60	73.399	ENSPCAG00000008223	RBM28	58	73.399	Procavia_capensis
ENSSBOG00000012308	RBM28	88	100.000	ENSPCOG00000016797	RBM28	89	100.000	Propithecus_coquereli
ENSSBOG00000012308	RBM28	68	90.640	ENSPVAG00000005443	RBM28	57	90.640	Pteropus_vampyrus
ENSSBOG00000012308	RBM28	100	46.210	ENSPNYG00000014003	rbm28	86	47.396	Pundamilia_nyererei
ENSSBOG00000012308	RBM28	100	77.011	ENSRNOG00000005468	Rbm28	90	77.011	Rattus_norvegicus
ENSSBOG00000012308	RBM28	100	89.764	ENSRBIG00000033990	RBM28	82	100.000	Rhinopithecus_bieti
ENSSBOG00000012308	RBM28	100	89.501	ENSRROG00000040747	RBM28	82	100.000	Rhinopithecus_roxellana
ENSSBOG00000012308	RBM28	95	61.173	ENSSHAG00000017017	RBM28	89	60.446	Sarcophilus_harrisii
ENSSBOG00000012308	RBM28	73	62.201	ENSSFOG00015001231	rbm28	66	62.201	Scleropages_formosus
ENSSBOG00000012308	RBM28	77	54.237	ENSSLDG00000020099	rbm28	91	42.754	Seriola_lalandi_dorsalis
ENSSBOG00000012308	RBM28	71	93.333	ENSSARG00000008303	RBM28	66	93.333	Sorex_araneus
ENSSBOG00000012308	RBM28	59	82.000	ENSSPUG00000000838	RBM28	69	80.000	Sphenodon_punctatus
ENSSBOG00000012308	RBM28	65	56.962	ENSSPAG00000023305	rbm28	90	47.321	Stegastes_partitus
ENSSBOG00000012308	RBM28	100	79.058	ENSSSCG00000031847	RBM28	91	79.058	Sus_scrofa
ENSSBOG00000012308	RBM28	77	56.277	ENSTRUG00000013311	rbm28	90	46.292	Takifugu_rubripes
ENSSBOG00000012308	RBM28	99	47.668	ENSTNIG00000017962	rbm28	90	47.927	Tetraodon_nigroviridis
ENSSBOG00000012308	RBM28	83	68.553	ENSTBEG00000012749	RBM28	71	73.191	Tupaia_belangeri
ENSSBOG00000012308	RBM28	100	76.240	ENSTTRG00000013647	RBM28	85	73.890	Tursiops_truncatus
ENSSBOG00000012308	RBM28	100	72.571	ENSUAMG00000006949	RBM28	100	72.714	Ursus_americanus
ENSSBOG00000012308	RBM28	100	80.366	ENSUMAG00000005997	RBM28	85	79.581	Ursus_maritimus
ENSSBOG00000012308	RBM28	82	75.746	ENSVPAG00000008304	RBM28	78	74.653	Vicugna_pacos
ENSSBOG00000012308	RBM28	100	78.534	ENSVVUG00000007270	RBM28	85	76.440	Vulpes_vulpes
ENSSBOG00000012308	RBM28	98	50.663	ENSXETG00000009271	rbm28	89	50.663	Xenopus_tropicalis
ENSSBOG00000012308	RBM28	99	46.615	ENSXMAG00000004415	rbm28	85	47.927	Xiphophorus_maculatus