EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000012868 (Gene tree)
Gene ID: 101031875
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 261 bases
Position: chrJH378123.1:29022838-29023098
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000002458	LSM	PF01423.22	3.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000014094	-	261	XM_003926678	ENSSBOP00000002458	86 (aa)	XP_003926727	A0A2K6S505

Gene Model

Click here to download ENSSBOG00000012868's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000012868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000012868	-	78	43.284	ENSSBOG00000028103	-	81	43.284
ENSSBOG00000012868	-	100	98.837	ENSSBOG00000036179	-	100	98.837
ENSSBOG00000012868	-	87	85.333	ENSSBOG00000032297	-	86	85.333
ENSSBOG00000012868	-	77	51.515	ENSSBOG00000021229	-	83	51.515
ENSSBOG00000012868	-	87	79.487	ENSSBOG00000027638	-	88	79.487

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000012868	-	100	98.837	ENSG00000139343	SNRPF	100	98.837	Homo_sapiens
ENSSBOG00000012868	-	99	96.471	ENSAPOG00000003377	snrpf	66	96.471	Acanthochromis_polyacanthus
ENSSBOG00000012868	-	88	86.842	ENSAMEG00000018718	-	87	88.000	Ailuropoda_melanoleuca
ENSSBOG00000012868	-	99	98.824	ENSAMEG00000002166	-	100	98.824	Ailuropoda_melanoleuca
ENSSBOG00000012868	-	98	96.429	ENSACIG00000013216	snrpf	99	96.429	Amphilophus_citrinellus
ENSSBOG00000012868	-	98	96.429	ENSAOCG00000015108	snrpf	99	96.429	Amphiprion_ocellaris
ENSSBOG00000012868	-	98	96.429	ENSAPEG00000022022	snrpf	99	96.429	Amphiprion_percula
ENSSBOG00000012868	-	98	96.429	ENSATEG00000022625	snrpf	90	96.429	Anabas_testudineus
ENSSBOG00000012868	-	99	97.647	ENSACAG00000014073	SNRPF	98	97.647	Anolis_carolinensis
ENSSBOG00000012868	-	83	91.549	ENSANAG00000020297	-	65	91.549	Aotus_nancymaae
ENSSBOG00000012868	-	100	98.837	ENSANAG00000032845	SNRPF	100	98.837	Aotus_nancymaae
ENSSBOG00000012868	-	87	69.333	ENSANAG00000025860	-	85	69.333	Aotus_nancymaae
ENSSBOG00000012868	-	98	96.429	ENSACLG00000016066	snrpf	99	96.429	Astatotilapia_calliptera
ENSSBOG00000012868	-	87	94.667	ENSAMXG00000007421	snrpf	87	94.667	Astyanax_mexicanus
ENSSBOG00000012868	-	100	98.837	ENSBTAG00000016271	SNRPF	100	98.837	Bos_taurus
ENSSBOG00000012868	-	91	92.308	ENSBTAG00000050012	-	93	93.333	Bos_taurus
ENSSBOG00000012868	-	90	71.429	WBGene00004918	snr-5	85	75.000	Caenorhabditis_elegans
ENSSBOG00000012868	-	100	98.837	ENSCJAG00000002705	-	100	98.837	Callithrix_jacchus
ENSSBOG00000012868	-	85	91.781	ENSCAFG00000031151	-	85	94.521	Canis_familiaris
ENSSBOG00000012868	-	100	98.837	ENSCAFG00000006395	-	77	98.837	Canis_familiaris
ENSSBOG00000012868	-	85	91.781	ENSCAFG00020010823	-	85	94.521	Canis_lupus_dingo
ENSSBOG00000012868	-	91	88.462	ENSCAFG00020013161	-	74	97.143	Canis_lupus_dingo
ENSSBOG00000012868	-	94	92.593	ENSTSYG00000031636	-	61	95.890	Carlito_syrichta
ENSSBOG00000012868	-	87	86.667	ENSTSYG00000030635	-	87	86.667	Carlito_syrichta
ENSSBOG00000012868	-	87	93.421	ENSTSYG00000036502	-	87	93.421	Carlito_syrichta
ENSSBOG00000012868	-	99	98.824	ENSCAPG00000007242	SNRPF	100	98.824	Cavia_aperea
ENSSBOG00000012868	-	100	98.837	ENSCPOG00000013898	SNRPF	100	98.837	Cavia_porcellus
ENSSBOG00000012868	-	100	97.674	ENSCCAG00000017356	-	100	97.674	Cebus_capucinus
ENSSBOG00000012868	-	100	87.209	ENSCCAG00000033627	-	59	89.333	Cebus_capucinus
ENSSBOG00000012868	-	100	98.837	ENSCCAG00000037378	-	100	98.837	Cebus_capucinus
ENSSBOG00000012868	-	100	98.837	ENSCLAG00000007200	SNRPF	100	98.837	Chinchilla_lanigera
ENSSBOG00000012868	-	100	98.837	ENSCSAG00000003602	-	70	98.837	Chlorocebus_sabaeus
ENSSBOG00000012868	-	74	100.000	ENSCHOG00000009392	SNRPF	100	100.000	Choloepus_hoffmanni
ENSSBOG00000012868	-	99	94.118	ENSCPBG00000024287	-	67	94.118	Chrysemys_picta_bellii
ENSSBOG00000012868	-	100	88.372	ENSCPBG00000001985	-	89	90.667	Chrysemys_picta_bellii
ENSSBOG00000012868	-	100	88.372	ENSCPBG00000026463	-	87	90.667	Chrysemys_picta_bellii
ENSSBOG00000012868	-	87	92.000	ENSCPBG00000006227	-	87	92.000	Chrysemys_picta_bellii
ENSSBOG00000012868	-	99	88.235	ENSCSAVG00000007498	-	84	89.189	Ciona_savignyi
ENSSBOG00000012868	-	100	98.837	ENSCGRG00001017100	-	100	98.837	Cricetulus_griseus_chok1gshd
ENSSBOG00000012868	-	87	92.000	ENSCGRG00001008965	-	58	92.000	Cricetulus_griseus_chok1gshd
ENSSBOG00000012868	-	93	91.250	ENSCGRG00000018878	-	94	92.000	Cricetulus_griseus_crigri
ENSSBOG00000012868	-	100	98.837	ENSCGRG00000000336	-	100	98.837	Cricetulus_griseus_crigri
ENSSBOG00000012868	-	87	96.000	ENSCSEG00000004748	snrpf	87	96.000	Cynoglossus_semilaevis
ENSSBOG00000012868	-	99	96.471	ENSCVAG00000000397	snrpf	67	96.471	Cyprinodon_variegatus
ENSSBOG00000012868	-	100	94.318	ENSDARG00000105037	snrpf	100	94.318	Danio_rerio
ENSSBOG00000012868	-	87	84.000	ENSDNOG00000049373	-	65	84.000	Dasypus_novemcinctus
ENSSBOG00000012868	-	100	98.837	ENSDNOG00000043775	-	55	98.837	Dasypus_novemcinctus
ENSSBOG00000012868	-	100	97.674	ENSDNOG00000048989	-	77	97.674	Dasypus_novemcinctus
ENSSBOG00000012868	-	84	88.889	ENSDORG00000025351	-	100	88.889	Dipodomys_ordii
ENSSBOG00000012868	-	81	97.143	ENSDORG00000029740	-	85	97.143	Dipodomys_ordii
ENSSBOG00000012868	-	98	79.762	FBgn0000426	SmF	83	82.192	Drosophila_melanogaster
ENSSBOG00000012868	-	100	98.837	ENSETEG00000001558	-	100	98.837	Echinops_telfairi
ENSSBOG00000012868	-	95	75.610	ENSEBUG00000001793	-	72	86.567	Eptatretus_burgeri
ENSSBOG00000012868	-	100	98.837	ENSECAG00000019817	SNRPF	70	98.837	Equus_caballus
ENSSBOG00000012868	-	99	98.824	ENSEEUG00000013509	SNRPF	100	98.824	Erinaceus_europaeus
ENSSBOG00000012868	-	87	94.667	ENSELUG00000003121	RUXF	87	94.667	Esox_lucius
ENSSBOG00000012868	-	100	90.698	ENSELUG00000007737	RUXF	86	93.333	Esox_lucius
ENSSBOG00000012868	-	98	77.381	ENSFCAG00000031148	-	69	76.000	Felis_catus
ENSSBOG00000012868	-	100	98.837	ENSFCAG00000029966	-	100	98.837	Felis_catus
ENSSBOG00000012868	-	87	76.000	ENSFCAG00000021942	-	87	76.000	Felis_catus
ENSSBOG00000012868	-	99	98.824	ENSFALG00000010799	SNRPF	99	98.824	Ficedula_albicollis
ENSSBOG00000012868	-	100	98.837	ENSFDAG00000002831	-	100	98.837	Fukomys_damarensis
ENSSBOG00000012868	-	99	96.471	ENSFHEG00000003240	snrpf	75	96.471	Fundulus_heteroclitus
ENSSBOG00000012868	-	99	96.471	ENSGMOG00000007741	snrpf	100	96.471	Gadus_morhua
ENSSBOG00000012868	-	100	98.837	ENSGALG00000011409	SNRPF	100	98.837	Gallus_gallus
ENSSBOG00000012868	-	98	96.429	ENSGAFG00000016187	snrpf	97	96.429	Gambusia_affinis
ENSSBOG00000012868	-	86	95.946	ENSGACG00000020055	snrpf	87	95.946	Gasterosteus_aculeatus
ENSSBOG00000012868	-	86	93.243	ENSGAGG00000012945	-	69	94.667	Gopherus_agassizii
ENSSBOG00000012868	-	70	91.667	ENSGAGG00000011163	-	100	91.667	Gopherus_agassizii
ENSSBOG00000012868	-	80	86.957	ENSGAGG00000014132	-	83	86.957	Gopherus_agassizii
ENSSBOG00000012868	-	72	96.774	ENSGAGG00000020974	-	52	96.774	Gopherus_agassizii
ENSSBOG00000012868	-	92	91.139	ENSGAGG00000022991	-	80	94.118	Gopherus_agassizii
ENSSBOG00000012868	-	98	79.762	ENSGGOG00000039936	-	83	78.667	Gorilla_gorilla
ENSSBOG00000012868	-	100	98.837	ENSGGOG00000001127	-	100	98.837	Gorilla_gorilla
ENSSBOG00000012868	-	92	74.684	ENSGGOG00000039564	-	90	74.667	Gorilla_gorilla
ENSSBOG00000012868	-	100	97.674	ENSHGLG00000021172	-	100	97.674	Heterocephalus_glaber_female
ENSSBOG00000012868	-	100	98.837	ENSHGLG00000009108	SNRPF	100	98.837	Heterocephalus_glaber_female
ENSSBOG00000012868	-	100	97.674	ENSHGLG00100019596	-	100	97.674	Heterocephalus_glaber_male
ENSSBOG00000012868	-	99	98.824	ENSHGLG00100008103	-	100	98.824	Heterocephalus_glaber_male
ENSSBOG00000012868	-	73	85.714	ENSHCOG00000018663	snrpf	55	85.714	Hippocampus_comes
ENSSBOG00000012868	-	100	96.512	ENSIPUG00000018994	snrpf	100	96.512	Ictalurus_punctatus
ENSSBOG00000012868	-	100	98.837	ENSSTOG00000010434	-	100	98.837	Ictidomys_tridecemlineatus
ENSSBOG00000012868	-	100	84.884	ENSJJAG00000010502	-	89	86.667	Jaculus_jaculus
ENSSBOG00000012868	-	100	81.395	ENSJJAG00000004558	-	89	82.667	Jaculus_jaculus
ENSSBOG00000012868	-	78	94.030	ENSJJAG00000004828	-	100	94.030	Jaculus_jaculus
ENSSBOG00000012868	-	100	98.837	ENSJJAG00000011272	-	100	98.837	Jaculus_jaculus
ENSSBOG00000012868	-	87	96.000	ENSKMAG00000013566	snrpf	87	96.000	Kryptolebias_marmoratus
ENSSBOG00000012868	-	87	96.000	ENSLBEG00000008800	snrpf	87	96.000	Labrus_bergylta
ENSSBOG00000012868	-	100	97.674	ENSLACG00000002456	-	74	97.674	Latimeria_chalumnae
ENSSBOG00000012868	-	87	94.667	ENSLOCG00000015744	snrpf	87	94.667	Lepisosteus_oculatus
ENSSBOG00000012868	-	99	98.824	ENSLAFG00000017426	SNRPF	99	98.824	Loxodonta_africana
ENSSBOG00000012868	-	85	95.890	ENSMAMG00000016593	snrpf	86	95.890	Mastacembelus_armatus
ENSSBOG00000012868	-	98	96.429	ENSMZEG00005014701	snrpf	99	96.429	Maylandia_zebra
ENSSBOG00000012868	-	98	98.810	ENSMGAG00000011453	-	76	98.810	Meleagris_gallopavo
ENSSBOG00000012868	-	86	98.649	ENSMAUG00000019737	-	100	98.649	Mesocricetus_auratus
ENSSBOG00000012868	-	97	74.699	ENSMAUG00000010289	-	96	74.699	Mesocricetus_auratus
ENSSBOG00000012868	-	86	98.649	ENSMAUG00000016909	-	100	98.649	Mesocricetus_auratus
ENSSBOG00000012868	-	87	94.667	ENSMAUG00000008799	-	87	94.667	Mesocricetus_auratus
ENSSBOG00000012868	-	100	98.837	ENSMICG00000012153	-	100	98.837	Microcebus_murinus
ENSSBOG00000012868	-	87	93.333	ENSMICG00000030494	-	60	93.333	Microcebus_murinus
ENSSBOG00000012868	-	100	98.837	ENSMOCG00000020437	Snrpf	100	98.837	Microtus_ochrogaster
ENSSBOG00000012868	-	87	85.333	ENSMOCG00000022166	-	82	85.333	Microtus_ochrogaster
ENSSBOG00000012868	-	79	83.824	ENSMOCG00000020220	-	87	83.824	Microtus_ochrogaster
ENSSBOG00000012868	-	99	95.294	ENSMMOG00000007127	snrpf	100	95.294	Mola_mola
ENSSBOG00000012868	-	100	98.837	ENSMODG00000008091	SNRPF	75	98.837	Monodelphis_domestica
ENSSBOG00000012868	-	98	96.429	ENSMALG00000012328	snrpf	99	96.429	Monopterus_albus
ENSSBOG00000012868	-	100	98.837	MGP_CAROLIEiJ_G0015735	-	100	98.837	Mus_caroli
ENSSBOG00000012868	-	100	98.837	ENSMUSG00000020018	Snrpf	100	98.837	Mus_musculus
ENSSBOG00000012868	-	100	98.837	MGP_PahariEiJ_G0031350	Snrpf	100	98.837	Mus_pahari
ENSSBOG00000012868	-	100	98.837	MGP_SPRETEiJ_G0016553	Snrpf	100	98.837	Mus_spretus
ENSSBOG00000012868	-	100	98.837	ENSMPUG00000007176	-	77	98.837	Mustela_putorius_furo
ENSSBOG00000012868	-	100	79.070	ENSMLUG00000026269	-	71	78.667	Myotis_lucifugus
ENSSBOG00000012868	-	100	98.837	ENSMLUG00000027932	-	81	98.837	Myotis_lucifugus
ENSSBOG00000012868	-	99	98.824	ENSMLUG00000013577	-	100	98.824	Myotis_lucifugus
ENSSBOG00000012868	-	100	98.837	ENSMLUG00000029201	-	81	98.837	Myotis_lucifugus
ENSSBOG00000012868	-	100	98.837	ENSMLUG00000026149	-	81	98.837	Myotis_lucifugus
ENSSBOG00000012868	-	73	88.889	ENSNGAG00000005851	-	71	90.000	Nannospalax_galili
ENSSBOG00000012868	-	100	98.837	ENSNGAG00000024292	-	100	98.837	Nannospalax_galili
ENSSBOG00000012868	-	99	96.471	ENSNBRG00000011682	snrpf	87	96.471	Neolamprologus_brichardi
ENSSBOG00000012868	-	86	70.270	ENSMEUG00000000671	SNRPF	87	70.270	Notamacropus_eugenii
ENSSBOG00000012868	-	100	98.837	ENSODEG00000010328	-	100	98.837	Octodon_degus
ENSSBOG00000012868	-	100	97.674	ENSOCUG00000010925	SNRPF	76	97.674	Oryctolagus_cuniculus
ENSSBOG00000012868	-	86	94.595	ENSORLG00020008216	snrpf	87	94.595	Oryzias_latipes_hni
ENSSBOG00000012868	-	86	94.595	ENSORLG00015007418	snrpf	87	94.595	Oryzias_latipes_hsok
ENSSBOG00000012868	-	85	95.890	ENSOMEG00000003018	snrpf	86	95.890	Oryzias_melastigma
ENSSBOG00000012868	-	100	96.512	ENSOGAG00000030323	-	100	96.512	Otolemur_garnettii
ENSSBOG00000012868	-	100	98.837	ENSOARG00000011853	-	75	98.837	Ovis_aries
ENSSBOG00000012868	-	92	74.684	ENSPPAG00000037479	-	91	74.667	Pan_paniscus
ENSSBOG00000012868	-	98	79.762	ENSPPAG00000037544	-	83	78.667	Pan_paniscus
ENSSBOG00000012868	-	98	76.190	ENSPPRG00000007449	-	77	77.333	Panthera_pardus
ENSSBOG00000012868	-	100	98.837	ENSPPRG00000005875	-	100	98.837	Panthera_pardus
ENSSBOG00000012868	-	98	78.571	ENSPTIG00000005117	-	89	77.333	Panthera_tigris_altaica
ENSSBOG00000012868	-	100	98.837	ENSPTIG00000007520	SNRPF	100	98.837	Panthera_tigris_altaica
ENSSBOG00000012868	-	98	79.762	ENSPTRG00000043814	-	83	78.667	Pan_troglodytes
ENSSBOG00000012868	-	92	74.684	ENSPTRG00000047717	-	91	74.667	Pan_troglodytes
ENSSBOG00000012868	-	99	96.471	ENSPKIG00000014784	snrpf	93	96.471	Paramormyrops_kingsleyae
ENSSBOG00000012868	-	99	98.824	ENSPSIG00000016462	SNRPF	99	98.824	Pelodiscus_sinensis
ENSSBOG00000012868	-	99	95.294	ENSPMGG00000023548	snrpf	100	95.294	Periophthalmus_magnuspinnatus
ENSSBOG00000012868	-	100	98.837	ENSPEMG00000023326	Snrpf	100	98.837	Peromyscus_maniculatus_bairdii
ENSSBOG00000012868	-	98	96.429	ENSPLAG00000023932	snrpf	99	96.429	Poecilia_latipinna
ENSSBOG00000012868	-	98	96.429	ENSPMEG00000003377	snrpf	99	96.429	Poecilia_mexicana
ENSSBOG00000012868	-	98	96.429	ENSPREG00000022635	snrpf	97	96.429	Poecilia_reticulata
ENSSBOG00000012868	-	100	98.837	ENSPPYG00000004847	-	100	98.837	Pongo_abelii
ENSSBOG00000012868	-	100	98.837	ENSPCOG00000023833	-	100	98.837	Propithecus_coquereli
ENSSBOG00000012868	-	100	98.837	ENSPVAG00000009036	SNRPF	100	98.837	Pteropus_vampyrus
ENSSBOG00000012868	-	98	96.429	ENSPNYG00000021712	snrpf	99	96.429	Pundamilia_nyererei
ENSSBOG00000012868	-	85	95.890	ENSPNAG00000019117	snrpf	86	95.890	Pygocentrus_nattereri
ENSSBOG00000012868	-	100	98.837	ENSRNOG00000005556	Snrpf	100	98.837	Rattus_norvegicus
ENSSBOG00000012868	-	87	97.333	ENSRBIG00000030414	-	87	97.333	Rhinopithecus_bieti
ENSSBOG00000012868	-	87	97.333	ENSRROG00000021975	-	87	97.333	Rhinopithecus_roxellana
ENSSBOG00000012868	-	81	59.155	YPR182W	SMX3	83	59.155	Saccharomyces_cerevisiae
ENSSBOG00000012868	-	99	98.824	ENSSHAG00000012294	SNRPF	77	98.824	Sarcophilus_harrisii
ENSSBOG00000012868	-	74	96.875	ENSSFOG00015021523	snrpf	96	96.875	Scleropages_formosus
ENSSBOG00000012868	-	87	94.667	ENSSMAG00000005533	snrpf	86	94.667	Scophthalmus_maximus
ENSSBOG00000012868	-	76	96.923	ENSSDUG00000016283	snrpf	77	96.923	Seriola_dumerili
ENSSBOG00000012868	-	87	96.000	ENSSLDG00000005119	snrpf	87	96.000	Seriola_lalandi_dorsalis
ENSSBOG00000012868	-	92	76.250	ENSSLDG00000003885	-	90	77.027	Seriola_lalandi_dorsalis
ENSSBOG00000012868	-	98	98.810	ENSSPUG00000014590	-	99	98.810	Sphenodon_punctatus
ENSSBOG00000012868	-	99	96.471	ENSSPAG00000003283	snrpf	97	96.471	Stegastes_partitus
ENSSBOG00000012868	-	100	98.837	ENSSSCG00000000895	SNRPF	100	98.837	Sus_scrofa
ENSSBOG00000012868	-	67	94.828	ENSTRUG00000014956	snrpf	84	94.828	Takifugu_rubripes
ENSSBOG00000012868	-	87	96.000	ENSTNIG00000012672	snrpf	87	96.000	Tetraodon_nigroviridis
ENSSBOG00000012868	-	87	70.667	ENSTTRG00000006070	SNRPF	87	70.667	Tursiops_truncatus
ENSSBOG00000012868	-	100	98.837	ENSUAMG00000008176	-	100	98.837	Ursus_americanus
ENSSBOG00000012868	-	100	86.047	ENSUAMG00000001101	-	88	89.333	Ursus_americanus
ENSSBOG00000012868	-	100	98.837	ENSUMAG00000003528	-	100	98.837	Ursus_maritimus
ENSSBOG00000012868	-	87	89.333	ENSUMAG00000006177	-	88	89.333	Ursus_maritimus
ENSSBOG00000012868	-	100	98.837	ENSVPAG00000008712	-	100	98.837	Vicugna_pacos
ENSSBOG00000012868	-	91	91.026	ENSVVUG00000023821	-	96	92.000	Vulpes_vulpes
ENSSBOG00000012868	-	86	75.000	ENSXETG00000021630	snrpf	87	75.000	Xenopus_tropicalis
ENSSBOG00000012868	-	98	96.429	ENSXCOG00000013860	snrpf	97	96.429	Xiphophorus_couchianus
ENSSBOG00000012868	-	98	96.429	ENSXMAG00000015448	snrpf	99	96.429	Xiphophorus_maculatus