EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000014441 (Gene tree)
Gene ID: -
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 49998 bases
Position: chrJH378135.1:4858608-4908605
Accession: 17906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000002850	GUCT	PF08152.12	7.6e-16	1	1
ENSSBOP00000002836	GUCT	PF08152.12	2.5e-15	1	1
ENSSBOP00000002859	GUCT	PF08152.12	4.1e-14	1	1
ENSSBOP00000002859	ResIII	PF04851.15	3.5e-10	1	1
ENSSBOP00000002850	ResIII	PF04851.15	4.7e-10	1	1
ENSSBOP00000002836	ResIII	PF04851.15	5e-10	1	1
ENSSBOP00000002859	DEAD	PF00270.29	1.6e-47	1	1
ENSSBOP00000002850	DEAD	PF00270.29	2e-47	1	1
ENSSBOP00000002836	DEAD	PF00270.29	2.2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000016007	DDX50-204	156	-	ENSSBOP00000002867	51 (aa)	-	A0A2K6S654
ENSSBOT00000015976	DDX50-203	2248	XM_010339426	ENSSBOP00000002859	577 (aa)	XP_010337728	A0A2K6S657
ENSSBOT00000015903	DDX50-201	2007	-	ENSSBOP00000002836	668 (aa)	-	A0A2K6S630
ENSSBOT00000015939	DDX50-202	1953	-	ENSSBOP00000002850	651 (aa)	-	A0A2K6S635

Gene Model

Click here to download ENSSBOG00000014441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000014441's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000014441	DDX50	79	45.175	ENSSBOG00000025801	-	78	42.531
ENSSBOG00000014441	DDX50	52	30.000	ENSSBOG00000033581	DDX41	56	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000014441	DDX50	100	88.874	ENSG00000107625	DDX50	100	88.874	Homo_sapiens
ENSSBOG00000014441	DDX50	99	87.322	ENSAMEG00000017992	DDX50	92	85.862	Ailuropoda_melanoleuca
ENSSBOG00000014441	DDX50	99	71.069	ENSANAG00000017785	-	91	71.450	Aotus_nancymaae
ENSSBOG00000014441	DDX50	99	97.222	ENSBTAG00000033413	DDX50	100	95.022	Bos_taurus
ENSSBOG00000014441	DDX50	100	89.145	ENSCJAG00000018844	DDX50	100	89.145	Callithrix_jacchus
ENSSBOG00000014441	DDX50	99	87.639	ENSCAFG00000013776	DDX50	99	86.303	Canis_familiaris
ENSSBOG00000014441	DDX50	99	87.639	ENSCAFG00020025977	DDX50	92	86.303	Canis_lupus_dingo
ENSSBOG00000014441	DDX50	100	86.431	ENSCHIG00000000285	DDX50	92	85.841	Capra_hircus
ENSSBOG00000014441	DDX50	100	87.653	ENSTSYG00000004192	DDX50	100	87.653	Carlito_syrichta
ENSSBOG00000014441	DDX50	99	72.559	ENSCAPG00000007230	-	87	74.430	Cavia_aperea
ENSSBOG00000014441	DDX50	99	86.349	ENSCPOG00000002131	-	92	85.103	Cavia_porcellus
ENSSBOG00000014441	DDX50	87	95.556	ENSCCAG00000030543	DDX50	90	88.298	Cebus_capucinus
ENSSBOG00000014441	DDX50	99	60.447	ENSCATG00000039259	-	89	59.912	Cercocebus_atys
ENSSBOG00000014441	DDX50	99	86.169	ENSCATG00000032463	DDX50	99	86.141	Cercocebus_atys
ENSSBOG00000014441	DDX50	99	65.190	ENSCATG00000035153	-	95	65.294	Cercocebus_atys
ENSSBOG00000014441	DDX50	99	87.302	ENSCLAG00000012957	-	92	86.136	Chinchilla_lanigera
ENSSBOG00000014441	DDX50	96	64.051	ENSCLAG00000001938	-	91	64.174	Chinchilla_lanigera
ENSSBOG00000014441	DDX50	100	89.145	ENSCSAG00000007703	DDX50	100	89.145	Chlorocebus_sabaeus
ENSSBOG00000014441	DDX50	95	85.191	ENSCHOG00000000233	DDX50	97	83.975	Choloepus_hoffmanni
ENSSBOG00000014441	DDX50	100	78.014	ENSCANG00000036450	-	100	78.014	Colobus_angolensis_palliatus
ENSSBOG00000014441	DDX50	99	62.839	ENSCANG00000028077	-	91	62.519	Colobus_angolensis_palliatus
ENSSBOG00000014441	DDX50	86	63.226	ENSCANG00000018820	-	88	63.304	Colobus_angolensis_palliatus
ENSSBOG00000014441	DDX50	99	86.032	ENSCGRG00001020223	Ddx50	92	84.661	Cricetulus_griseus_chok1gshd
ENSSBOG00000014441	DDX50	99	86.032	ENSCGRG00000015884	Ddx50	92	84.661	Cricetulus_griseus_crigri
ENSSBOG00000014441	DDX50	99	81.240	ENSDNOG00000001675	DDX50	97	81.210	Dasypus_novemcinctus
ENSSBOG00000014441	DDX50	99	86.984	ENSDORG00000007310	Ddx50	92	85.546	Dipodomys_ordii
ENSSBOG00000014441	DDX50	87	91.549	ENSETEG00000014069	DDX50	83	91.549	Echinops_telfairi
ENSSBOG00000014441	DDX50	100	86.839	ENSEASG00005015595	DDX50	99	86.839	Equus_asinus_asinus
ENSSBOG00000014441	DDX50	100	86.974	ENSECAG00000023044	DDX50	99	86.974	Equus_caballus
ENSSBOG00000014441	DDX50	90	89.655	ENSEEUG00000005782	DDX50	89	89.655	Erinaceus_europaeus
ENSSBOG00000014441	DDX50	100	87.534	ENSFCAG00000012678	DDX50	99	87.534	Felis_catus
ENSSBOG00000014441	DDX50	94	85.235	ENSFDAG00000016109	-	91	81.504	Fukomys_damarensis
ENSSBOG00000014441	DDX50	100	88.874	ENSGGOG00000010100	DDX50	100	88.874	Gorilla_gorilla
ENSSBOG00000014441	DDX50	99	85.714	ENSHGLG00000013466	DDX50	92	84.366	Heterocephalus_glaber_female
ENSSBOG00000014441	DDX50	99	78.163	ENSHGLG00100006568	-	94	77.120	Heterocephalus_glaber_male
ENSSBOG00000014441	DDX50	99	85.714	ENSHGLG00100017191	DDX50	92	84.366	Heterocephalus_glaber_male
ENSSBOG00000014441	DDX50	100	88.797	ENSSTOG00000021852	-	100	88.797	Ictidomys_tridecemlineatus
ENSSBOG00000014441	DDX50	100	65.021	ENSJJAG00000019626	-	91	63.914	Jaculus_jaculus
ENSSBOG00000014441	DDX50	100	84.261	ENSJJAG00000023928	-	92	83.333	Jaculus_jaculus
ENSSBOG00000014441	DDX50	99	88.254	ENSLAFG00000006186	DDX50	100	87.246	Loxodonta_africana
ENSSBOG00000014441	DDX50	100	89.145	ENSMFAG00000044067	DDX50	100	89.145	Macaca_fascicularis
ENSSBOG00000014441	DDX50	99	65.190	ENSMFAG00000045339	-	89	72.669	Macaca_fascicularis
ENSSBOG00000014441	DDX50	100	89.145	ENSMMUG00000001006	DDX50	100	89.145	Macaca_mulatta
ENSSBOG00000014441	DDX50	92	56.449	ENSMMUG00000045343	-	90	56.317	Macaca_mulatta
ENSSBOG00000014441	DDX50	100	82.768	ENSMNEG00000031664	DDX50	100	82.768	Macaca_nemestrina
ENSSBOG00000014441	DDX50	99	66.142	ENSMNEG00000045530	-	95	66.179	Macaca_nemestrina
ENSSBOG00000014441	DDX50	85	73.669	ENSMLEG00000041988	-	89	74.406	Mandrillus_leucophaeus
ENSSBOG00000014441	DDX50	100	90.355	ENSMLEG00000037313	DDX50	100	90.355	Mandrillus_leucophaeus
ENSSBOG00000014441	DDX50	72	94.431	ENSMAUG00000022192	Ddx50	100	94.431	Mesocricetus_auratus
ENSSBOG00000014441	DDX50	100	80.190	ENSMICG00000017539	DDX50	100	80.190	Microcebus_murinus
ENSSBOG00000014441	DDX50	99	85.601	ENSMOCG00000001676	Ddx50	92	84.265	Microtus_ochrogaster
ENSSBOG00000014441	DDX50	99	70.440	ENSMODG00000010741	DDX50	92	69.971	Monodelphis_domestica
ENSSBOG00000014441	DDX50	99	84.286	MGP_CAROLIEiJ_G0015389	Ddx50	92	83.776	Mus_caroli
ENSSBOG00000014441	DDX50	99	84.762	ENSMUSG00000020076	Ddx50	92	84.071	Mus_musculus
ENSSBOG00000014441	DDX50	99	84.921	MGP_PahariEiJ_G0030805	Ddx50	92	84.218	Mus_pahari
ENSSBOG00000014441	DDX50	99	84.762	MGP_SPRETEiJ_G0016200	Ddx50	92	84.071	Mus_spretus
ENSSBOG00000014441	DDX50	99	86.688	ENSMPUG00000004589	DDX50	98	86.478	Mustela_putorius_furo
ENSSBOG00000014441	DDX50	99	86.190	ENSMLUG00000017590	DDX50	92	84.808	Myotis_lucifugus
ENSSBOG00000014441	DDX50	99	86.508	ENSNGAG00000004283	Ddx50	92	85.103	Nannospalax_galili
ENSSBOG00000014441	DDX50	100	89.009	ENSNLEG00000011631	DDX50	100	89.009	Nomascus_leucogenys
ENSSBOG00000014441	DDX50	98	59.770	ENSNLEG00000035506	-	94	60.153	Nomascus_leucogenys
ENSSBOG00000014441	DDX50	99	83.968	ENSOPRG00000001619	DDX50	92	83.333	Ochotona_princeps
ENSSBOG00000014441	DDX50	99	85.714	ENSODEG00000014597	-	92	84.956	Octodon_degus
ENSSBOG00000014441	DDX50	91	61.604	ENSOANG00000004776	DDX50	76	62.647	Ornithorhynchus_anatinus
ENSSBOG00000014441	DDX50	99	85.873	ENSOCUG00000002879	DDX50	95	84.661	Oryctolagus_cuniculus
ENSSBOG00000014441	DDX50	100	87.788	ENSOGAG00000001844	DDX50	100	87.788	Otolemur_garnettii
ENSSBOG00000014441	DDX50	100	86.431	ENSOARG00000005264	DDX50	92	85.841	Ovis_aries
ENSSBOG00000014441	DDX50	100	88.738	ENSPPAG00000040723	DDX50	100	88.738	Pan_paniscus
ENSSBOG00000014441	DDX50	100	87.534	ENSPPRG00000015826	DDX50	100	87.534	Panthera_pardus
ENSSBOG00000014441	DDX50	100	87.534	ENSPTIG00000008454	DDX50	100	87.534	Panthera_tigris_altaica
ENSSBOG00000014441	DDX50	100	88.738	ENSPTRG00000002562	DDX50	100	88.738	Pan_troglodytes
ENSSBOG00000014441	DDX50	99	81.429	ENSPANG00000022143	-	92	80.531	Papio_anubis
ENSSBOG00000014441	DDX50	99	84.762	ENSPEMG00000020899	-	92	83.481	Peromyscus_maniculatus_bairdii
ENSSBOG00000014441	DDX50	99	70.973	ENSPCIG00000016036	DDX50	94	69.400	Phascolarctos_cinereus
ENSSBOG00000014441	DDX50	92	87.801	ENSPPYG00000002390	DDX50	100	87.946	Pongo_abelii
ENSSBOG00000014441	DDX50	86	99.390	ENSPCAG00000009692	DDX50	81	99.390	Procavia_capensis
ENSSBOG00000014441	DDX50	77	95.455	ENSPCOG00000012574	DDX50	91	95.455	Propithecus_coquereli
ENSSBOG00000014441	DDX50	85	99.091	ENSPVAG00000009519	DDX50	69	100.000	Pteropus_vampyrus
ENSSBOG00000014441	DDX50	99	84.127	ENSRNOG00000000396	Ddx50	98	77.807	Rattus_norvegicus
ENSSBOG00000014441	DDX50	99	60.163	ENSRBIG00000039673	-	90	58.529	Rhinopithecus_bieti
ENSSBOG00000014441	DDX50	99	60.573	ENSRBIG00000036573	-	92	59.941	Rhinopithecus_bieti
ENSSBOG00000014441	DDX50	99	88.038	ENSRBIG00000042841	-	97	87.566	Rhinopithecus_bieti
ENSSBOG00000014441	DDX50	99	58.231	ENSRROG00000022853	-	91	57.249	Rhinopithecus_roxellana
ENSSBOG00000014441	DDX50	100	88.874	ENSRROG00000032158	DDX50	100	88.874	Rhinopithecus_roxellana
ENSSBOG00000014441	DDX50	90	58.092	ENSSHAG00000005334	-	86	55.505	Sarcophilus_harrisii
ENSSBOG00000014441	DDX50	95	71.405	ENSSHAG00000005690	DDX50	91	70.455	Sarcophilus_harrisii
ENSSBOG00000014441	DDX50	91	96.951	ENSSARG00000013553	DDX50	72	96.951	Sorex_araneus
ENSSBOG00000014441	DDX50	99	96.354	ENSSSCG00000010246	DDX50	91	93.910	Sus_scrofa
ENSSBOG00000014441	DDX50	84	97.561	ENSTBEG00000001085	DDX50	66	97.561	Tupaia_belangeri
ENSSBOG00000014441	DDX50	100	81.275	ENSTTRG00000012408	DDX50	99	81.275	Tursiops_truncatus
ENSSBOG00000014441	DDX50	99	87.480	ENSUAMG00000010976	DDX50	99	85.495	Ursus_americanus
ENSSBOG00000014441	DDX50	99	87.480	ENSUMAG00000007726	DDX50	92	86.156	Ursus_maritimus
ENSSBOG00000014441	DDX50	99	86.825	ENSVPAG00000000626	DDX50	92	85.398	Vicugna_pacos
ENSSBOG00000014441	DDX50	95	81.954	ENSVVUG00000020366	DDX50	98	83.163	Vulpes_vulpes