EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000016810 (Gene tree)
Gene ID: 101047975
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 10498 bases
Position: chrJH378122.1:1775810-1786307
Accession: 6919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000003504	MBD	PF01429.19	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000018555	MBD4-201	2266	XM_003926160	ENSSBOP00000003504	573 (aa)	XP_003926209	A0A2K6S7Z6

Gene Model

Click here to download ENSSBOG00000016810's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000016810's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000016810	MBD4	100	89.100	ENSG00000129071	MBD4	99	89.619	Homo_sapiens
ENSSBOG00000016810	MBD4	99	75.610	ENSAMEG00000004562	MBD4	99	75.610	Ailuropoda_melanoleuca
ENSSBOG00000016810	MBD4	99	69.231	ENSBTAG00000021645	MBD4	100	69.231	Bos_taurus
ENSSBOG00000016810	MBD4	100	92.535	ENSCJAG00000017293	MBD4	99	92.708	Callithrix_jacchus
ENSSBOG00000016810	MBD4	99	73.958	ENSCAFG00000004867	MBD4	99	73.958	Canis_familiaris
ENSSBOG00000016810	MBD4	99	73.958	ENSCAFG00020007082	MBD4	99	73.958	Canis_lupus_dingo
ENSSBOG00000016810	MBD4	99	67.832	ENSCHIG00000009760	MBD4	100	67.832	Capra_hircus
ENSSBOG00000016810	MBD4	100	93.241	ENSCCAG00000029796	MBD4	99	93.414	Cebus_capucinus
ENSSBOG00000016810	MBD4	100	86.806	ENSCATG00000035211	MBD4	99	87.326	Cercocebus_atys
ENSSBOG00000016810	MBD4	98	68.607	ENSCLAG00000008974	MBD4	99	68.607	Chinchilla_lanigera
ENSSBOG00000016810	MBD4	100	86.285	ENSCSAG00000009037	MBD4	99	86.806	Chlorocebus_sabaeus
ENSSBOG00000016810	MBD4	86	50.870	ENSCPBG00000014704	MBD4	89	50.870	Chrysemys_picta_bellii
ENSSBOG00000016810	MBD4	100	86.979	ENSCANG00000007120	MBD4	99	87.500	Colobus_angolensis_palliatus
ENSSBOG00000016810	MBD4	99	65.734	ENSCGRG00001003507	Mbd4	100	66.084	Cricetulus_griseus_chok1gshd
ENSSBOG00000016810	MBD4	99	65.734	ENSCGRG00000010974	Mbd4	100	66.084	Cricetulus_griseus_crigri
ENSSBOG00000016810	MBD4	99	73.822	ENSDNOG00000049619	MBD4	100	73.822	Dasypus_novemcinctus
ENSSBOG00000016810	MBD4	81	63.226	ENSDORG00000000902	-	97	62.658	Dipodomys_ordii
ENSSBOG00000016810	MBD4	55	48.062	ENSEBUG00000010816	mbd4	73	48.062	Eptatretus_burgeri
ENSSBOG00000016810	MBD4	99	77.622	ENSEASG00005014800	MBD4	100	77.622	Equus_asinus_asinus
ENSSBOG00000016810	MBD4	99	77.622	ENSECAG00000022106	MBD4	100	77.622	Equus_caballus
ENSSBOG00000016810	MBD4	96	60.870	ENSEEUG00000011459	MBD4	99	60.870	Erinaceus_europaeus
ENSSBOG00000016810	MBD4	100	75.868	ENSFCAG00000000083	MBD4	99	75.868	Felis_catus
ENSSBOG00000016810	MBD4	82	45.021	ENSFALG00000013663	MBD4	99	45.272	Ficedula_albicollis
ENSSBOG00000016810	MBD4	86	51.068	ENSGAGG00000018644	MBD4	89	51.068	Gopherus_agassizii
ENSSBOG00000016810	MBD4	100	88.235	ENSGGOG00000010698	MBD4	99	88.754	Gorilla_gorilla
ENSSBOG00000016810	MBD4	98	71.076	ENSHGLG00000009034	MBD4	99	71.076	Heterocephalus_glaber_female
ENSSBOG00000016810	MBD4	98	71.076	ENSHGLG00100000135	MBD4	99	71.076	Heterocephalus_glaber_male
ENSSBOG00000016810	MBD4	99	70.855	ENSSTOG00000020663	MBD4	100	70.855	Ictidomys_tridecemlineatus
ENSSBOG00000016810	MBD4	86	39.458	ENSLBEG00000005669	MBD4	86	39.961	Labrus_bergylta
ENSSBOG00000016810	MBD4	99	72.222	ENSLAFG00000010609	MBD4	99	72.222	Loxodonta_africana
ENSSBOG00000016810	MBD4	100	86.806	ENSMFAG00000002266	MBD4	99	87.326	Macaca_fascicularis
ENSSBOG00000016810	MBD4	100	86.851	ENSMMUG00000012723	MBD4	99	87.370	Macaca_mulatta
ENSSBOG00000016810	MBD4	96	86.462	ENSMNEG00000029752	MBD4	99	87.004	Macaca_nemestrina
ENSSBOG00000016810	MBD4	100	86.632	ENSMLEG00000024859	MBD4	99	87.153	Mandrillus_leucophaeus
ENSSBOG00000016810	MBD4	100	79.514	ENSMICG00000008022	MBD4	99	79.514	Microcebus_murinus
ENSSBOG00000016810	MBD4	68	47.342	ENSMOCG00000002466	-	97	47.342	Microtus_ochrogaster
ENSSBOG00000016810	MBD4	86	60.081	ENSMODG00000006399	-	99	60.081	Monodelphis_domestica
ENSSBOG00000016810	MBD4	99	66.087	MGP_CAROLIEiJ_G0028760	Mbd4	100	66.087	Mus_caroli
ENSSBOG00000016810	MBD4	99	66.087	ENSMUSG00000030322	Mbd4	100	66.087	Mus_musculus
ENSSBOG00000016810	MBD4	99	65.854	MGP_PahariEiJ_G0022511	-	100	65.854	Mus_pahari
ENSSBOG00000016810	MBD4	99	65.391	MGP_SPRETEiJ_G0029788	Mbd4	100	65.391	Mus_spretus
ENSSBOG00000016810	MBD4	99	73.391	ENSMPUG00000017195	MBD4	99	73.391	Mustela_putorius_furo
ENSSBOG00000016810	MBD4	93	77.757	ENSMLUG00000014766	MBD4	98	77.757	Myotis_lucifugus
ENSSBOG00000016810	MBD4	100	88.889	ENSNLEG00000005337	MBD4	99	89.410	Nomascus_leucogenys
ENSSBOG00000016810	MBD4	50	100.000	ENSMEUG00000015599	-	77	100.000	Notamacropus_eugenii
ENSSBOG00000016810	MBD4	100	64.818	ENSOPRG00000000473	MBD4	99	64.818	Ochotona_princeps
ENSSBOG00000016810	MBD4	85	40.530	ENSONIG00000017212	mbd4	99	40.530	Oreochromis_niloticus
ENSSBOG00000016810	MBD4	74	43.418	ENSOANG00000004589	-	96	43.418	Ornithorhynchus_anatinus
ENSSBOG00000016810	MBD4	100	66.897	ENSOCUG00000013006	MBD4	99	66.897	Oryctolagus_cuniculus
ENSSBOG00000016810	MBD4	99	74.042	ENSOGAG00000010236	MBD4	100	74.042	Otolemur_garnettii
ENSSBOG00000016810	MBD4	99	68.007	ENSOARG00000014699	MBD4	100	68.007	Ovis_aries
ENSSBOG00000016810	MBD4	100	87.716	ENSPPAG00000036528	MBD4	99	88.235	Pan_paniscus
ENSSBOG00000016810	MBD4	100	74.826	ENSPPRG00000016480	MBD4	99	74.826	Panthera_pardus
ENSSBOG00000016810	MBD4	100	88.581	ENSPTRG00000015377	MBD4	99	89.100	Pan_troglodytes
ENSSBOG00000016810	MBD4	100	87.674	ENSPANG00000015047	MBD4	99	88.194	Papio_anubis
ENSSBOG00000016810	MBD4	86	50.382	ENSPSIG00000007892	MBD4	88	50.382	Pelodiscus_sinensis
ENSSBOG00000016810	MBD4	94	59.007	ENSPEMG00000006226	Mbd4	99	59.158	Peromyscus_maniculatus_bairdii
ENSSBOG00000016810	MBD4	89	58.382	ENSPCIG00000002276	-	98	58.382	Phascolarctos_cinereus
ENSSBOG00000016810	MBD4	100	87.002	ENSPPYG00000013417	MBD4	99	87.522	Pongo_abelii
ENSSBOG00000016810	MBD4	96	68.659	ENSPCAG00000012915	MBD4	99	68.659	Procavia_capensis
ENSSBOG00000016810	MBD4	100	76.389	ENSPVAG00000005238	MBD4	99	76.389	Pteropus_vampyrus
ENSSBOG00000016810	MBD4	99	65.043	ENSRNOG00000010919	Mbd4	100	65.043	Rattus_norvegicus
ENSSBOG00000016810	MBD4	100	87.500	ENSRBIG00000027722	MBD4	99	88.021	Rhinopithecus_bieti
ENSSBOG00000016810	MBD4	100	87.326	ENSRROG00000029136	MBD4	99	87.847	Rhinopithecus_roxellana
ENSSBOG00000016810	MBD4	93	56.667	ENSSHAG00000012953	MBD4	94	56.852	Sarcophilus_harrisii
ENSSBOG00000016810	MBD4	86	42.998	ENSSFOG00015016292	mbd4	95	42.998	Scleropages_formosus
ENSSBOG00000016810	MBD4	64	78.161	ENSSMAG00000013958	-	68	44.055	Scophthalmus_maximus
ENSSBOG00000016810	MBD4	81	60.086	ENSSARG00000004496	-	80	60.086	Sorex_araneus
ENSSBOG00000016810	MBD4	86	50.888	ENSSPUG00000017344	MBD4	91	50.888	Sphenodon_punctatus
ENSSBOG00000016810	MBD4	99	73.380	ENSSSCG00000033303	MBD4	100	73.380	Sus_scrofa
ENSSBOG00000016810	MBD4	85	36.986	ENSTNIG00000017927	mbd4	99	36.986	Tetraodon_nigroviridis
ENSSBOG00000016810	MBD4	87	60.550	ENSTBEG00000003041	-	87	60.550	Tupaia_belangeri
ENSSBOG00000016810	MBD4	98	74.468	ENSTTRG00000011265	MBD4	100	74.468	Tursiops_truncatus
ENSSBOG00000016810	MBD4	86	78.226	ENSUAMG00000000814	MBD4	99	78.226	Ursus_americanus
ENSSBOG00000016810	MBD4	99	76.049	ENSUMAG00000017542	MBD4	100	76.049	Ursus_maritimus
ENSSBOG00000016810	MBD4	65	68.981	ENSVPAG00000004040	-	67	68.981	Vicugna_pacos
ENSSBOG00000016810	MBD4	99	74.132	ENSVVUG00000014222	MBD4	99	74.132	Vulpes_vulpes