EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000016930 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 2294 bases
Position: chrJH378116.1:3611173-3613466
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000003648	GTP_EFTU	PF00009.27	1.5e-35	1	1
ENSSBOP00000003630	GTP_EFTU	PF00009.27	2.3e-33	1	1
ENSSBOP00000003648	MMR_HSR1	PF01926.23	3.3e-07	1	1
ENSSBOP00000003630	MMR_HSR1	PF01926.23	7.7e-07	1	1
ENSSBOP00000003655	GTP_EFTU_D2	PF03144.25	3.9e-07	1	1
ENSSBOP00000003655	GTP_EFTU_D3	PF03143.17	9.8e-23	1	1
ENSSBOP00000003648	GTP_EFTU_D3	PF03143.17	4.3e-22	1	1
ENSSBOP00000003630	GTP_EFTU_D3	PF03143.17	4.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000018979	-	1932	-	ENSSBOP00000003630	643 (aa)	-	A0A2K6S8B9
ENSSBOT00000019031	-	1821	-	ENSSBOP00000003648	606 (aa)	-	A0A2K6S8F7
ENSSBOT00000019074	-	456	-	ENSSBOP00000003668	151 (aa)	-	A0A2K6S8H7
ENSSBOT00000019048	-	564	-	ENSSBOP00000003655	187 (aa)	-	A0A2K6S8E3
ENSSBOT00000018561	-	714	-	ENSSBOP00000003505	237 (aa)	-	A0A2K6S7Z5

Gene Model

Click here to download ENSSBOG00000016930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000016930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000016930	-	94	32.402	ENSSBOG00000017761	GSPT1	80	38.278
ENSSBOG00000016930	-	94	32.402	ENSSBOG00000036422	GSPT2	66	38.278
ENSSBOG00000016930	-	54	30.939	ENSSBOG00000022443	-	87	30.939
ENSSBOG00000016930	-	62	33.411	ENSSBOG00000021512	EEF1A2	99	33.411
ENSSBOG00000016930	-	64	32.723	ENSSBOG00000033014	-	95	32.723
ENSSBOG00000016930	-	64	31.106	ENSSBOG00000032457	-	95	31.106
ENSSBOG00000016930	-	98	90.957	ENSSBOG00000019696	-	100	88.613
ENSSBOG00000016930	-	61	31.894	ENSSBOG00000015022	-	98	31.894
ENSSBOG00000016930	-	61	33.493	ENSSBOG00000031399	-	98	33.493

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000016930	-	98	89.362	ENSG00000112339	HBS1L	100	87.413	Homo_sapiens
ENSSBOG00000016930	-	79	75.871	ENSAPOG00000013169	hbs1l	91	75.871	Acanthochromis_polyacanthus
ENSSBOG00000016930	-	97	88.172	ENSAMEG00000009749	HBS1L	99	83.333	Ailuropoda_melanoleuca
ENSSBOG00000016930	-	98	77.660	ENSACIG00000017087	hbs1l	90	69.088	Amphilophus_citrinellus
ENSSBOG00000016930	-	96	77.717	ENSAOCG00000021197	hbs1l	93	78.378	Amphiprion_ocellaris
ENSSBOG00000016930	-	98	77.128	ENSAPEG00000008320	hbs1l	100	63.766	Amphiprion_percula
ENSSBOG00000016930	-	98	77.128	ENSATEG00000004459	hbs1l	100	63.239	Anabas_testudineus
ENSSBOG00000016930	-	98	85.106	ENSAPLG00000007791	HBS1L	99	72.929	Anas_platyrhynchos
ENSSBOG00000016930	-	98	81.915	ENSACAG00000010120	HBS1L	100	71.988	Anolis_carolinensis
ENSSBOG00000016930	-	98	90.426	ENSANAG00000038076	HBS1L	100	88.175	Aotus_nancymaae
ENSSBOG00000016930	-	98	79.787	ENSACLG00000010469	hbs1l	100	64.074	Astatotilapia_calliptera
ENSSBOG00000016930	-	98	79.787	ENSAMXG00000004260	hbs1l	97	70.000	Astyanax_mexicanus
ENSSBOG00000016930	-	98	87.766	ENSBTAG00000020174	HBS1L	100	83.236	Bos_taurus
ENSSBOG00000016930	-	97	30.688	WBGene00010622	K07A12.4	71	43.499	Caenorhabditis_elegans
ENSSBOG00000016930	-	98	90.426	ENSCJAG00000007678	HBS1L	100	88.321	Callithrix_jacchus
ENSSBOG00000016930	-	98	88.830	ENSCAFG00000000226	HBS1L	100	82.799	Canis_familiaris
ENSSBOG00000016930	-	98	88.830	ENSCAFG00020021904	HBS1L	100	82.799	Canis_lupus_dingo
ENSSBOG00000016930	-	98	87.234	ENSCHIG00000010299	HBS1L	100	82.070	Capra_hircus
ENSSBOG00000016930	-	98	88.830	ENSTSYG00000007089	HBS1L	100	82.653	Carlito_syrichta
ENSSBOG00000016930	-	96	85.870	ENSCAPG00000004378	-	94	86.096	Cavia_aperea
ENSSBOG00000016930	-	97	85.484	ENSCPOG00000007015	HBS1L	99	72.363	Cavia_porcellus
ENSSBOG00000016930	-	100	88.954	ENSCCAG00000033863	HBS1L	100	88.796	Cebus_capucinus
ENSSBOG00000016930	-	98	89.894	ENSCATG00000043042	HBS1L	100	85.985	Cercocebus_atys
ENSSBOG00000016930	-	98	87.234	ENSCLAG00000004937	HBS1L	100	81.050	Chinchilla_lanigera
ENSSBOG00000016930	-	98	88.360	ENSCSAG00000016791	HBS1L	99	85.924	Chlorocebus_sabaeus
ENSSBOG00000016930	-	91	78.431	ENSCHOG00000001852	HBS1L	91	78.431	Choloepus_hoffmanni
ENSSBOG00000016930	-	98	84.043	ENSCPBG00000017635	HBS1L	100	75.581	Chrysemys_picta_bellii
ENSSBOG00000016930	-	96	50.811	ENSCING00000005592	-	99	43.562	Ciona_intestinalis
ENSSBOG00000016930	-	96	49.730	ENSCSAVG00000002297	-	99	55.556	Ciona_savignyi
ENSSBOG00000016930	-	98	90.426	ENSCANG00000031208	HBS1L	100	86.131	Colobus_angolensis_palliatus
ENSSBOG00000016930	-	98	88.830	ENSCGRG00001024531	Hbs1l	100	81.341	Cricetulus_griseus_chok1gshd
ENSSBOG00000016930	-	98	88.830	ENSCGRG00000017361	Hbs1l	100	81.341	Cricetulus_griseus_crigri
ENSSBOG00000016930	-	98	79.679	ENSCSEG00000002794	hbs1l	94	65.131	Cynoglossus_semilaevis
ENSSBOG00000016930	-	98	77.660	ENSCVAG00000001462	hbs1l	100	63.314	Cyprinodon_variegatus
ENSSBOG00000016930	-	98	78.191	ENSDARG00000036778	hbs1l	100	64.985	Danio_rerio
ENSSBOG00000016930	-	98	87.766	ENSDORG00000005958	Hbs1l	100	81.752	Dipodomys_ordii
ENSSBOG00000016930	-	98	45.213	FBgn0042712	HBS1	100	42.373	Drosophila_melanogaster
ENSSBOG00000016930	-	98	88.830	ENSETEG00000000913	HBS1L	100	77.599	Echinops_telfairi
ENSSBOG00000016930	-	98	67.380	ENSEBUG00000010759	hbs1l	100	58.167	Eptatretus_burgeri
ENSSBOG00000016930	-	98	87.766	ENSEASG00005011148	HBS1L	100	81.951	Equus_asinus_asinus
ENSSBOG00000016930	-	98	87.766	ENSECAG00000004470	HBS1L	100	81.805	Equus_caballus
ENSSBOG00000016930	-	98	89.362	ENSEEUG00000013582	HBS1L	100	77.147	Erinaceus_europaeus
ENSSBOG00000016930	-	91	57.454	ENSELUG00000006444	hbs1l	95	57.860	Esox_lucius
ENSSBOG00000016930	-	98	89.362	ENSFCAG00000001810	HBS1L	100	84.261	Felis_catus
ENSSBOG00000016930	-	98	84.574	ENSFALG00000011898	HBS1L	100	74.415	Ficedula_albicollis
ENSSBOG00000016930	-	98	88.298	ENSFDAG00000011841	HBS1L	100	81.487	Fukomys_damarensis
ENSSBOG00000016930	-	98	75.000	ENSFHEG00000006942	hbs1l	100	63.713	Fundulus_heteroclitus
ENSSBOG00000016930	-	98	78.723	ENSGMOG00000011843	hbs1l	100	64.971	Gadus_morhua
ENSSBOG00000016930	-	98	84.043	ENSGALG00000013962	HBS1L	100	73.004	Gallus_gallus
ENSSBOG00000016930	-	98	79.255	ENSGAFG00000004157	hbs1l	100	64.731	Gambusia_affinis
ENSSBOG00000016930	-	98	77.540	ENSGACG00000011035	hbs1l	100	64.151	Gasterosteus_aculeatus
ENSSBOG00000016930	-	98	83.511	ENSGAGG00000002033	HBS1L	100	74.891	Gopherus_agassizii
ENSSBOG00000016930	-	98	89.362	ENSGGOG00000034956	-	97	87.047	Gorilla_gorilla
ENSSBOG00000016930	-	98	79.787	ENSHBUG00000013424	hbs1l	100	64.215	Haplochromis_burtoni
ENSSBOG00000016930	-	98	87.766	ENSHGLG00000000516	HBS1L	100	80.612	Heterocephalus_glaber_female
ENSSBOG00000016930	-	98	87.766	ENSHGLG00100003550	HBS1L	100	80.612	Heterocephalus_glaber_male
ENSSBOG00000016930	-	98	77.660	ENSHCOG00000007581	hbs1l	93	64.370	Hippocampus_comes
ENSSBOG00000016930	-	98	77.660	ENSIPUG00000010748	hbs1l	100	64.296	Ictalurus_punctatus
ENSSBOG00000016930	-	98	89.362	ENSSTOG00000007551	HBS1L	100	83.382	Ictidomys_tridecemlineatus
ENSSBOG00000016930	-	97	86.022	ENSJJAG00000017024	-	97	76.281	Jaculus_jaculus
ENSSBOG00000016930	-	96	76.087	ENSJJAG00000012660	-	100	66.066	Jaculus_jaculus
ENSSBOG00000016930	-	98	78.191	ENSKMAG00000012130	hbs1l	96	68.864	Kryptolebias_marmoratus
ENSSBOG00000016930	-	98	78.723	ENSLBEG00000002784	hbs1l	100	64.950	Labrus_bergylta
ENSSBOG00000016930	-	73	81.022	ENSLACG00000004528	HBS1L	99	70.935	Latimeria_chalumnae
ENSSBOG00000016930	-	98	80.319	ENSLOCG00000016221	hbs1l	100	64.276	Lepisosteus_oculatus
ENSSBOG00000016930	-	98	87.766	ENSLAFG00000007835	HBS1L	100	80.640	Loxodonta_africana
ENSSBOG00000016930	-	98	89.894	ENSMFAG00000003766	HBS1L	100	85.985	Macaca_fascicularis
ENSSBOG00000016930	-	98	89.894	ENSMMUG00000004802	HBS1L	98	85.424	Macaca_mulatta
ENSSBOG00000016930	-	98	89.894	ENSMNEG00000043942	HBS1L	100	85.985	Macaca_nemestrina
ENSSBOG00000016930	-	98	89.894	ENSMLEG00000043218	HBS1L	98	85.777	Mandrillus_leucophaeus
ENSSBOG00000016930	-	98	78.191	ENSMAMG00000016498	hbs1l	98	70.377	Mastacembelus_armatus
ENSSBOG00000016930	-	98	79.787	ENSMZEG00005024018	-	88	70.810	Maylandia_zebra
ENSSBOG00000016930	-	98	79.787	ENSMZEG00005015575	hbs1l	100	64.074	Maylandia_zebra
ENSSBOG00000016930	-	98	82.979	ENSMGAG00000013065	HBS1L	98	73.254	Meleagris_gallopavo
ENSSBOG00000016930	-	98	87.234	ENSMAUG00000001077	Hbs1l	100	81.341	Mesocricetus_auratus
ENSSBOG00000016930	-	97	89.247	ENSMICG00000001533	-	98	83.057	Microcebus_murinus
ENSSBOG00000016930	-	97	87.027	ENSMICG00000030043	-	96	87.097	Microcebus_murinus
ENSSBOG00000016930	-	98	87.234	ENSMOCG00000023038	Hbs1l	100	81.050	Microtus_ochrogaster
ENSSBOG00000016930	-	98	79.255	ENSMMOG00000015507	hbs1l	99	65.663	Mola_mola
ENSSBOG00000016930	-	98	86.170	ENSMODG00000017499	HBS1L	100	77.875	Monodelphis_domestica
ENSSBOG00000016930	-	98	78.723	ENSMALG00000010768	hbs1l	100	63.508	Monopterus_albus
ENSSBOG00000016930	-	58	76.147	ENSMALG00000006007	-	86	76.147	Monopterus_albus
ENSSBOG00000016930	-	98	87.234	MGP_CAROLIEiJ_G0015162	Hbs1l	100	79.446	Mus_caroli
ENSSBOG00000016930	-	98	87.234	ENSMUSG00000019977	Hbs1l	100	80.916	Mus_musculus
ENSSBOG00000016930	-	98	85.106	MGP_PahariEiJ_G0023782	Hbs1l	100	78.134	Mus_pahari
ENSSBOG00000016930	-	98	87.234	MGP_SPRETEiJ_G0015970	Hbs1l	100	79.592	Mus_spretus
ENSSBOG00000016930	-	98	88.830	ENSMPUG00000014810	HBS1L	100	83.090	Mustela_putorius_furo
ENSSBOG00000016930	-	98	88.298	ENSMLUG00000010618	HBS1L	100	83.942	Myotis_lucifugus
ENSSBOG00000016930	-	98	88.298	ENSNGAG00000015184	Hbs1l	100	80.438	Nannospalax_galili
ENSSBOG00000016930	-	98	80.319	ENSNBRG00000020095	hbs1l	100	64.778	Neolamprologus_brichardi
ENSSBOG00000016930	-	98	88.830	ENSNLEG00000014721	HBS1L	100	85.839	Nomascus_leucogenys
ENSSBOG00000016930	-	82	87.432	ENSMEUG00000003907	HBS1L	79	87.432	Notamacropus_eugenii
ENSSBOG00000016930	-	73	85.124	ENSOPRG00000013595	HBS1L	76	85.124	Ochotona_princeps
ENSSBOG00000016930	-	98	87.766	ENSODEG00000008959	HBS1L	99	81.940	Octodon_degus
ENSSBOG00000016930	-	98	79.787	ENSONIG00000000460	hbs1l	100	63.994	Oreochromis_niloticus
ENSSBOG00000016930	-	98	82.888	ENSOANG00000002684	-	99	74.855	Ornithorhynchus_anatinus
ENSSBOG00000016930	-	100	78.280	ENSOCUG00000011619	HBS1L	99	81.260	Oryctolagus_cuniculus
ENSSBOG00000016930	-	98	76.596	ENSORLG00000016559	hbs1l	100	62.890	Oryzias_latipes
ENSSBOG00000016930	-	98	76.596	ENSORLG00020003827	hbs1l	100	62.748	Oryzias_latipes_hni
ENSSBOG00000016930	-	97	77.297	ENSORLG00015023105	hbs1l	100	62.606	Oryzias_latipes_hsok
ENSSBOG00000016930	-	98	79.255	ENSOMEG00000016715	hbs1l	100	64.448	Oryzias_melastigma
ENSSBOG00000016930	-	98	89.894	ENSOGAG00000012604	HBS1L	100	84.380	Otolemur_garnettii
ENSSBOG00000016930	-	97	88.172	ENSOARG00000014798	-	99	82.456	Ovis_aries
ENSSBOG00000016930	-	98	87.766	ENSOARG00000005671	-	100	82.070	Ovis_aries
ENSSBOG00000016930	-	98	89.894	ENSPPAG00000029900	HBS1L	100	86.861	Pan_paniscus
ENSSBOG00000016930	-	98	89.362	ENSPPRG00000005285	HBS1L	100	83.819	Panthera_pardus
ENSSBOG00000016930	-	98	89.362	ENSPTIG00000015803	HBS1L	100	83.673	Panthera_tigris_altaica
ENSSBOG00000016930	-	98	89.894	ENSPTRG00000018630	HBS1L	100	86.861	Pan_troglodytes
ENSSBOG00000016930	-	98	89.894	ENSPANG00000007075	HBS1L	100	85.985	Papio_anubis
ENSSBOG00000016930	-	98	76.596	ENSPKIG00000023171	hbs1l	100	64.203	Paramormyrops_kingsleyae
ENSSBOG00000016930	-	87	72.804	ENSPSIG00000016467	HBS1L	96	73.480	Pelodiscus_sinensis
ENSSBOG00000016930	-	96	79.891	ENSPMGG00000018051	hbs1l	96	79.787	Periophthalmus_magnuspinnatus
ENSSBOG00000016930	-	98	88.298	ENSPEMG00000014369	Hbs1l	100	80.904	Peromyscus_maniculatus_bairdii
ENSSBOG00000016930	-	97	72.432	ENSPMAG00000002516	hbs1l	100	58.960	Petromyzon_marinus
ENSSBOG00000016930	-	97	87.027	ENSPCIG00000013363	-	96	86.702	Phascolarctos_cinereus
ENSSBOG00000016930	-	98	78.723	ENSPFOG00000021764	hbs1l	100	63.842	Poecilia_formosa
ENSSBOG00000016930	-	98	78.191	ENSPLAG00000006193	hbs1l	100	64.164	Poecilia_latipinna
ENSSBOG00000016930	-	98	78.723	ENSPMEG00000000925	hbs1l	100	64.164	Poecilia_mexicana
ENSSBOG00000016930	-	98	78.191	ENSPREG00000011270	hbs1l	100	63.739	Poecilia_reticulata
ENSSBOG00000016930	-	100	87.958	ENSPPYG00000017027	HBS1L	100	86.277	Pongo_abelii
ENSSBOG00000016930	-	98	86.702	ENSPCAG00000007002	HBS1L	90	82.625	Procavia_capensis
ENSSBOG00000016930	-	97	88.649	ENSPVAG00000015229	HBS1L	90	81.331	Pteropus_vampyrus
ENSSBOG00000016930	-	98	79.787	ENSPNYG00000013360	hbs1l	100	64.074	Pundamilia_nyererei
ENSSBOG00000016930	-	98	79.255	ENSPNAG00000026721	hbs1l	100	65.468	Pygocentrus_nattereri
ENSSBOG00000016930	-	98	87.766	ENSRNOG00000014531	Hbs1l	100	79.446	Rattus_norvegicus
ENSSBOG00000016930	-	98	89.894	ENSRBIG00000004484	HBS1L	100	86.423	Rhinopithecus_bieti
ENSSBOG00000016930	-	98	89.894	ENSRROG00000026176	HBS1L	100	86.277	Rhinopithecus_roxellana
ENSSBOG00000016930	-	64	34.234	YKR084C	-	73	34.234	Saccharomyces_cerevisiae
ENSSBOG00000016930	-	98	86.702	ENSSHAG00000013509	HBS1L	100	79.767	Sarcophilus_harrisii
ENSSBOG00000016930	-	98	76.471	ENSSFOG00015017544	hbs1l	96	62.680	Scleropages_formosus
ENSSBOG00000016930	-	98	77.128	ENSSMAG00000010621	hbs1l	100	63.225	Scophthalmus_maximus
ENSSBOG00000016930	-	98	78.723	ENSSDUG00000012974	hbs1l	100	64.074	Seriola_dumerili
ENSSBOG00000016930	-	98	78.723	ENSSLDG00000004960	hbs1l	98	70.377	Seriola_lalandi_dorsalis
ENSSBOG00000016930	-	98	88.298	ENSSARG00000006747	HBS1L	99	82.212	Sorex_araneus
ENSSBOG00000016930	-	97	81.720	ENSSPUG00000012389	HBS1L	99	73.032	Sphenodon_punctatus
ENSSBOG00000016930	-	97	82.857	ENSSSCG00000004169	HBS1L	100	83.150	Sus_scrofa
ENSSBOG00000016930	-	98	83.333	ENSTGUG00000011507	HBS1L	99	72.344	Taeniopygia_guttata
ENSSBOG00000016930	-	98	78.610	ENSTRUG00000016128	hbs1l	99	64.275	Takifugu_rubripes
ENSSBOG00000016930	-	97	79.032	ENSTNIG00000016320	hbs1l	99	66.035	Tetraodon_nigroviridis
ENSSBOG00000016930	-	97	89.730	ENSTBEG00000009950	HBS1L	100	74.161	Tupaia_belangeri
ENSSBOG00000016930	-	98	87.701	ENSTTRG00000003715	HBS1L	99	83.163	Tursiops_truncatus
ENSSBOG00000016930	-	98	88.830	ENSUAMG00000001064	HBS1L	100	83.965	Ursus_americanus
ENSSBOG00000016930	-	98	88.830	ENSUMAG00000024395	HBS1L	100	84.375	Ursus_maritimus
ENSSBOG00000016930	-	98	88.298	ENSVPAG00000006280	HBS1L	90	82.625	Vicugna_pacos
ENSSBOG00000016930	-	98	88.830	ENSVVUG00000000295	HBS1L	100	82.945	Vulpes_vulpes
ENSSBOG00000016930	-	98	80.319	ENSXETG00000003726	hbs1l	100	67.733	Xenopus_tropicalis
ENSSBOG00000016930	-	98	78.075	ENSXCOG00000005323	hbs1l	100	65.452	Xiphophorus_couchianus
ENSSBOG00000016930	-	98	79.255	ENSXMAG00000004359	hbs1l	100	64.589	Xiphophorus_maculatus