EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000018208 (Gene tree)
Gene ID: 101035383
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 14084 bases
Position: chrJH378157.1:10499398-10513481
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000003969	APOBEC_N	PF08210.11	8.6e-77	1	2
ENSSBOP00000003969	APOBEC_N	PF08210.11	8.6e-77	2	2
ENSSBOP00000003969	APOBEC_C	PF05240.14	4.1e-64	1	2
ENSSBOP00000003969	APOBEC_C	PF05240.14	4.1e-64	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000020021	-	5458	XM_010343448	ENSSBOP00000003969	314 (aa)	XP_010341750	A0A2K6S9A3

Gene Model

Click here to download ENSSBOG00000018208's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000018208's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000018208	-	99	70.526	ENSSBOG00000029091	-	92	70.526
ENSSBOG00000018208	-	67	47.826	ENSSBOG00000035758	AICDA	85	47.826
ENSSBOG00000018208	-	99	83.974	ENSSBOG00000021384	-	95	83.974
ENSSBOG00000018208	-	92	37.838	ENSSBOG00000030005	APOBEC3H	93	42.647
ENSSBOG00000018208	-	100	80.255	ENSSBOG00000026566	-	97	80.255
ENSSBOG00000018208	-	99	52.381	ENSSBOG00000032780	-	94	52.381
ENSSBOG00000018208	-	94	32.143	ENSSBOG00000028496	APOBEC2	83	32.143
ENSSBOG00000018208	-	100	65.924	ENSSBOG00000025673	-	100	65.924
ENSSBOG00000018208	-	99	82.692	ENSSBOG00000023468	-	78	82.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000018208	-	99	65.605	ENSG00000239713	APOBEC3G	97	65.605	Homo_sapiens
ENSSBOG00000018208	-	98	48.958	ENSAMEG00000010815	-	81	48.958	Ailuropoda_melanoleuca
ENSSBOG00000018208	-	99	74.211	ENSANAG00000020573	-	95	74.211	Aotus_nancymaae
ENSSBOG00000018208	-	99	74.441	ENSANAG00000027961	-	99	74.441	Aotus_nancymaae
ENSSBOG00000018208	-	99	73.463	ENSANAG00000028416	-	97	73.463	Aotus_nancymaae
ENSSBOG00000018208	-	100	82.803	ENSANAG00000031271	APOBEC3G	97	82.803	Aotus_nancymaae
ENSSBOG00000018208	-	99	48.936	ENSBTAG00000037800	-	100	48.936	Bos_taurus
ENSSBOG00000018208	-	100	78.662	ENSCJAG00000023368	APOBEC3G	97	78.662	Callithrix_jacchus
ENSSBOG00000018208	-	95	72.432	ENSCJAG00000011578	-	75	72.432	Callithrix_jacchus
ENSSBOG00000018208	-	79	51.200	ENSCAFG00000023589	-	89	51.200	Canis_familiaris
ENSSBOG00000018208	-	99	43.434	ENSCAFG00000015211	-	98	43.434	Canis_familiaris
ENSSBOG00000018208	-	98	46.316	ENSCAFG00020002641	-	80	46.316	Canis_lupus_dingo
ENSSBOG00000018208	-	98	44.211	ENSCAFG00020002661	-	80	44.211	Canis_lupus_dingo
ENSSBOG00000018208	-	99	47.340	ENSCHIG00000012694	-	93	47.340	Capra_hircus
ENSSBOG00000018208	-	100	77.707	ENSCCAG00000032232	-	97	77.707	Cebus_capucinus
ENSSBOG00000018208	-	99	72.632	ENSCCAG00000030928	-	92	72.632	Cebus_capucinus
ENSSBOG00000018208	-	99	84.444	ENSCCAG00000033147	-	93	83.974	Cebus_capucinus
ENSSBOG00000018208	-	100	72.611	ENSCCAG00000032509	-	99	72.611	Cebus_capucinus
ENSSBOG00000018208	-	99	66.667	ENSCSAG00000006376	APOBEC3G	85	66.667	Chlorocebus_sabaeus
ENSSBOG00000018208	-	99	67.935	ENSCANG00000029968	-	75	67.935	Colobus_angolensis_palliatus
ENSSBOG00000018208	-	96	36.957	ENSDNOG00000039749	-	88	36.957	Dasypus_novemcinctus
ENSSBOG00000018208	-	99	51.515	ENSEASG00005018643	-	87	51.515	Equus_asinus_asinus
ENSSBOG00000018208	-	99	51.010	ENSECAG00000022371	APOBEC3Z1B	95	51.010	Equus_caballus
ENSSBOG00000018208	-	100	51.010	ENSECAG00000032756	-	72	51.010	Equus_caballus
ENSSBOG00000018208	-	99	63.816	ENSGGOG00000013750	APOBEC3G	96	63.816	Gorilla_gorilla
ENSSBOG00000018208	-	99	51.337	ENSLAFG00000008890	-	90	51.337	Loxodonta_africana
ENSSBOG00000018208	-	98	55.914	ENSLAFG00000005275	-	99	55.914	Loxodonta_africana
ENSSBOG00000018208	-	99	45.860	ENSLAFG00000020906	-	97	45.860	Loxodonta_africana
ENSSBOG00000018208	-	99	68.690	ENSMFAG00000044711	APOBEC3G	85	68.690	Macaca_fascicularis
ENSSBOG00000018208	-	99	68.471	ENSMMUG00000039346	APOBEC3G	95	68.404	Macaca_mulatta
ENSSBOG00000018208	-	99	68.690	ENSMNEG00000038847	APOBEC3G	94	68.471	Macaca_nemestrina
ENSSBOG00000018208	-	99	66.454	ENSMLEG00000024444	APOBEC3G	93	66.454	Mandrillus_leucophaeus
ENSSBOG00000018208	-	99	59.239	ENSMICG00000043748	-	91	59.239	Microcebus_murinus
ENSSBOG00000018208	-	99	54.891	ENSMICG00000047191	-	98	54.891	Microcebus_murinus
ENSSBOG00000018208	-	98	48.108	ENSMPUG00000013235	-	94	48.108	Mustela_putorius_furo
ENSSBOG00000018208	-	92	45.503	ENSMLUG00000014565	-	100	45.503	Myotis_lucifugus
ENSSBOG00000018208	-	99	50.802	ENSMLUG00000023022	-	86	50.802	Myotis_lucifugus
ENSSBOG00000018208	-	99	54.615	ENSMLUG00000008631	-	97	54.615	Myotis_lucifugus
ENSSBOG00000018208	-	95	43.787	ENSMLUG00000026771	-	96	43.787	Myotis_lucifugus
ENSSBOG00000018208	-	93	42.857	ENSMLUG00000000517	-	100	42.857	Myotis_lucifugus
ENSSBOG00000018208	-	99	45.699	ENSMLUG00000000977	-	97	45.699	Myotis_lucifugus
ENSSBOG00000018208	-	99	48.872	ENSMLUG00000024853	-	100	48.872	Myotis_lucifugus
ENSSBOG00000018208	-	99	46.524	ENSMLUG00000024957	-	88	46.524	Myotis_lucifugus
ENSSBOG00000018208	-	72	47.706	ENSMLUG00000022226	-	95	47.706	Myotis_lucifugus
ENSSBOG00000018208	-	97	42.077	ENSMLUG00000028652	-	80	41.935	Myotis_lucifugus
ENSSBOG00000018208	-	99	52.941	ENSNLEG00000018922	-	98	52.941	Nomascus_leucogenys
ENSSBOG00000018208	-	98	50.811	ENSOPRG00000002326	-	98	50.811	Ochotona_princeps
ENSSBOG00000018208	-	91	47.208	ENSOCUG00000023532	-	75	47.423	Oryctolagus_cuniculus
ENSSBOG00000018208	-	98	61.458	ENSOGAG00000024822	-	95	61.458	Otolemur_garnettii
ENSSBOG00000018208	-	99	66.667	ENSOGAG00000032518	-	98	66.667	Otolemur_garnettii
ENSSBOG00000018208	-	99	47.368	ENSOARG00000016213	APOBEC3Z1	100	47.368	Ovis_aries
ENSSBOG00000018208	-	99	65.176	ENSPPAG00000033277	-	76	65.176	Pan_paniscus
ENSSBOG00000018208	-	99	65.605	ENSPTRG00000014387	APOBEC3G	97	65.605	Pan_troglodytes
ENSSBOG00000018208	-	99	64.013	ENSPPYG00000011833	APOBEC3G	93	64.013	Pongo_abelii
ENSSBOG00000018208	-	79	56.000	ENSPCAG00000001848	-	91	56.000	Procavia_capensis
ENSSBOG00000018208	-	99	48.065	ENSPCAG00000015518	-	75	48.065	Procavia_capensis
ENSSBOG00000018208	-	92	56.571	ENSPCOG00000016357	-	86	56.571	Propithecus_coquereli
ENSSBOG00000018208	-	99	51.351	ENSPVAG00000004045	-	94	51.351	Pteropus_vampyrus
ENSSBOG00000018208	-	99	66.454	ENSRBIG00000035436	APOBEC3G	90	66.242	Rhinopithecus_bieti
ENSSBOG00000018208	-	91	50.829	ENSTTRG00000009395	-	89	50.829	Tursiops_truncatus
ENSSBOG00000018208	-	93	48.469	ENSUMAG00000014447	-	95	48.469	Ursus_maritimus
ENSSBOG00000018208	-	99	48.168	ENSUMAG00000002249	-	89	48.168	Ursus_maritimus
ENSSBOG00000018208	-	59	50.588	ENSVVUG00000022583	-	60	50.588	Vulpes_vulpes