EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000018280 (Gene tree)
Gene ID: 101030998
Gene Symbol: EFL1
Alias: EFTUD1|FAM42A|FLJ13119|HsT19294|RIA1
Full Name: elongation factor like GTPase 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 117165 bases
Position: chrJH378108.1:51891427-52008591
Accession: 25789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000004249	GTP_EFTU	PF00009.27	7.9e-61	1	1
ENSSBOP00000004275	GTP_EFTU	PF00009.27	5.3e-39	1	1
ENSSBOP00000004267	GTP_EFTU	PF00009.27	3e-32	1	2
ENSSBOP00000004267	GTP_EFTU	PF00009.27	3e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000020560	EFL1-202	3303	-	ENSSBOP00000004267	1100 (aa)	-	A0A2K6SA64
ENSSBOT00000020530	EFL1-201	3671	XM_003921674	ENSSBOP00000004249	1120 (aa)	XP_003921723	A0A2K6SA51
ENSSBOT00000020573	EFL1-203	3210	-	ENSSBOP00000004275	1069 (aa)	-	A0A2K6SA63

Gene Model

Click here to download ENSSBOG00000018280's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000018280's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000018280	EFL1	84	34.794	ENSSBOG00000022776	-	73	67.308
ENSSBOG00000018280	EFL1	92	35.398	ENSSBOG00000006731	-	96	51.724

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000018280	EFL1	100	97.768	ENSG00000140598	EFL1	100	100.000	Homo_sapiens
ENSSBOG00000018280	EFL1	99	68.278	ENSAPOG00000000188	efl1	99	68.278	Acanthochromis_polyacanthus
ENSSBOG00000018280	EFL1	100	92.730	ENSAMEG00000006031	EFL1	100	92.730	Ailuropoda_melanoleuca
ENSSBOG00000018280	EFL1	99	69.142	ENSACIG00000017802	efl1	99	69.319	Amphilophus_citrinellus
ENSSBOG00000018280	EFL1	99	68.314	ENSAOCG00000023933	efl1	99	68.342	Amphiprion_ocellaris
ENSSBOG00000018280	EFL1	99	68.981	ENSAPEG00000000262	efl1	99	68.981	Amphiprion_percula
ENSSBOG00000018280	EFL1	100	68.607	ENSATEG00000012373	efl1	100	68.634	Anabas_testudineus
ENSSBOG00000018280	EFL1	99	77.342	ENSAPLG00000011147	EFL1	99	77.342	Anas_platyrhynchos
ENSSBOG00000018280	EFL1	100	74.558	ENSACAG00000011040	EFL1	100	74.558	Anolis_carolinensis
ENSSBOG00000018280	EFL1	100	98.482	ENSANAG00000027459	EFL1	100	98.482	Aotus_nancymaae
ENSSBOG00000018280	EFL1	99	68.375	ENSACLG00000025780	efl1	100	68.282	Astatotilapia_calliptera
ENSSBOG00000018280	EFL1	100	69.137	ENSAMXG00000019529	efl1	100	68.854	Astyanax_mexicanus
ENSSBOG00000018280	EFL1	100	91.585	ENSBTAG00000003410	EFL1	100	91.585	Bos_taurus
ENSSBOG00000018280	EFL1	93	37.349	WBGene00010732	K10C3.5	92	57.658	Caenorhabditis_elegans
ENSSBOG00000018280	EFL1	85	100.000	ENSCJAG00000015607	-	93	100.000	Callithrix_jacchus
ENSSBOG00000018280	EFL1	100	91.223	ENSCAFG00000013671	EFL1	100	91.223	Canis_familiaris
ENSSBOG00000018280	EFL1	100	91.674	ENSCHIG00000001883	EFL1	100	91.674	Capra_hircus
ENSSBOG00000018280	EFL1	100	94.375	ENSTSYG00000000348	EFL1	100	94.375	Carlito_syrichta
ENSSBOG00000018280	EFL1	100	76.211	ENSCAPG00000017944	EFL1	100	76.035	Cavia_aperea
ENSSBOG00000018280	EFL1	100	90.071	ENSCPOG00000001924	EFL1	100	90.071	Cavia_porcellus
ENSSBOG00000018280	EFL1	100	98.597	ENSCCAG00000034450	EFL1	100	98.597	Cebus_capucinus
ENSSBOG00000018280	EFL1	100	96.352	ENSCATG00000031678	-	100	96.352	Cercocebus_atys
ENSSBOG00000018280	EFL1	100	90.071	ENSCLAG00000010155	EFL1	100	90.071	Chinchilla_lanigera
ENSSBOG00000018280	EFL1	100	96.786	ENSCSAG00000015165	EFL1	100	96.786	Chlorocebus_sabaeus
ENSSBOG00000018280	EFL1	76	90.299	ENSCHOG00000014029	EFL1	78	90.299	Choloepus_hoffmanni
ENSSBOG00000018280	EFL1	99	79.335	ENSCPBG00000017638	EFL1	99	79.335	Chrysemys_picta_bellii
ENSSBOG00000018280	EFL1	94	63.532	ENSCSAVG00000001787	-	99	62.615	Ciona_savignyi
ENSSBOG00000018280	EFL1	100	97.007	ENSCANG00000038093	EFL1	100	97.007	Colobus_angolensis_palliatus
ENSSBOG00000018280	EFL1	100	86.879	ENSCGRG00001010826	Efl1	100	86.879	Cricetulus_griseus_chok1gshd
ENSSBOG00000018280	EFL1	100	90.603	ENSCGRG00000003273	Efl1	100	90.603	Cricetulus_griseus_crigri
ENSSBOG00000018280	EFL1	99	65.313	ENSCSEG00000005856	efl1	99	65.402	Cynoglossus_semilaevis
ENSSBOG00000018280	EFL1	97	65.998	ENSCVAG00000011863	efl1	95	65.807	Cyprinodon_variegatus
ENSSBOG00000018280	EFL1	99	70.294	ENSDARG00000079672	efl1	98	70.205	Danio_rerio
ENSSBOG00000018280	EFL1	100	92.730	ENSDNOG00000006097	EFL1	100	92.730	Dasypus_novemcinctus
ENSSBOG00000018280	EFL1	100	88.064	ENSDORG00000000719	Efl1	100	88.064	Dipodomys_ordii
ENSSBOG00000018280	EFL1	99	44.880	FBgn0053158	CG33158	99	44.858	Drosophila_melanogaster
ENSSBOG00000018280	EFL1	97	82.500	ENSETEG00000004309	EFL1	100	82.500	Echinops_telfairi
ENSSBOG00000018280	EFL1	83	67.773	ENSEBUG00000010738	efl1	99	67.773	Eptatretus_burgeri
ENSSBOG00000018280	EFL1	100	89.760	ENSEASG00005007108	EFL1	100	89.760	Equus_asinus_asinus
ENSSBOG00000018280	EFL1	99	87.208	ENSECAG00000016354	EFL1	99	89.252	Equus_caballus
ENSSBOG00000018280	EFL1	72	86.494	ENSEEUG00000006326	EFL1	79	86.494	Erinaceus_europaeus
ENSSBOG00000018280	EFL1	100	64.385	ENSELUG00000002520	efl1	99	74.915	Esox_lucius
ENSSBOG00000018280	EFL1	100	90.357	ENSFCAG00000007741	EFL1	100	90.357	Felis_catus
ENSSBOG00000018280	EFL1	100	77.807	ENSFALG00000011103	EFL1	100	77.807	Ficedula_albicollis
ENSSBOG00000018280	EFL1	100	89.007	ENSFDAG00000009023	EFL1	100	89.007	Fukomys_damarensis
ENSSBOG00000018280	EFL1	100	67.611	ENSFHEG00000017795	efl1	100	67.522	Fundulus_heteroclitus
ENSSBOG00000018280	EFL1	99	64.737	ENSGMOG00000005041	efl1	100	64.648	Gadus_morhua
ENSSBOG00000018280	EFL1	100	78.021	ENSGALG00000006225	EFL1	100	78.021	Gallus_gallus
ENSSBOG00000018280	EFL1	99	66.726	ENSGACG00000012495	efl1	99	66.637	Gasterosteus_aculeatus
ENSSBOG00000018280	EFL1	100	79.353	ENSGAGG00000022841	EFL1	100	79.353	Gopherus_agassizii
ENSSBOG00000018280	EFL1	97	92.997	ENSGGOG00000005017	EFL1	100	92.997	Gorilla_gorilla
ENSSBOG00000018280	EFL1	99	68.138	ENSHBUG00000022667	efl1	100	68.218	Haplochromis_burtoni
ENSSBOG00000018280	EFL1	100	86.525	ENSHGLG00000011798	EFL1	100	86.525	Heterocephalus_glaber_female
ENSSBOG00000018280	EFL1	100	89.982	ENSHGLG00100010319	EFTUD1	100	95.181	Heterocephalus_glaber_male
ENSSBOG00000018280	EFL1	99	68.314	ENSHCOG00000007325	efl1	99	67.961	Hippocampus_comes
ENSSBOG00000018280	EFL1	99	68.510	ENSIPUG00000023360	EFTUD1	99	68.510	Ictalurus_punctatus
ENSSBOG00000018280	EFL1	100	90.884	ENSSTOG00000022945	EFL1	100	90.884	Ictidomys_tridecemlineatus
ENSSBOG00000018280	EFL1	100	89.982	ENSJJAG00000018598	Efl1	100	89.982	Jaculus_jaculus
ENSSBOG00000018280	EFL1	99	67.634	ENSLBEG00000015269	efl1	99	67.282	Labrus_bergylta
ENSSBOG00000018280	EFL1	100	71.716	ENSLACG00000016121	EFL1	100	71.716	Latimeria_chalumnae
ENSSBOG00000018280	EFL1	99	71.416	ENSLOCG00000012862	efl1	99	70.874	Lepisosteus_oculatus
ENSSBOG00000018280	EFL1	100	89.982	ENSLAFG00000012504	EFL1	100	89.982	Loxodonta_africana
ENSSBOG00000018280	EFL1	100	96.726	ENSMFAG00000032657	-	100	96.726	Macaca_fascicularis
ENSSBOG00000018280	EFL1	100	96.726	ENSMMUG00000023353	EFL1	100	96.726	Macaca_mulatta
ENSSBOG00000018280	EFL1	100	96.726	ENSMNEG00000041671	-	100	96.726	Macaca_nemestrina
ENSSBOG00000018280	EFL1	100	96.632	ENSMLEG00000033735	EFL1	100	96.632	Mandrillus_leucophaeus
ENSSBOG00000018280	EFL1	99	68.700	ENSMAMG00000011336	efl1	99	68.347	Mastacembelus_armatus
ENSSBOG00000018280	EFL1	99	68.402	ENSMZEG00005003012	efl1	99	68.574	Maylandia_zebra
ENSSBOG00000018280	EFL1	100	78.603	ENSMGAG00000007991	EFL1	100	78.603	Meleagris_gallopavo
ENSSBOG00000018280	EFL1	100	90.160	ENSMAUG00000010709	Efl1	100	90.160	Mesocricetus_auratus
ENSSBOG00000018280	EFL1	100	94.491	ENSMICG00000027853	EFL1	100	94.491	Microcebus_murinus
ENSSBOG00000018280	EFL1	100	89.894	ENSMOCG00000007470	Efl1	100	89.894	Microtus_ochrogaster
ENSSBOG00000018280	EFL1	100	65.520	ENSMMOG00000015370	efl1	100	65.428	Mola_mola
ENSSBOG00000018280	EFL1	100	83.908	ENSMODG00000019386	EFL1	100	83.908	Monodelphis_domestica
ENSSBOG00000018280	EFL1	100	67.422	ENSMALG00000018810	efl1	100	67.334	Monopterus_albus
ENSSBOG00000018280	EFL1	100	89.894	MGP_CAROLIEiJ_G0029936	Efl1	100	94.262	Mus_caroli
ENSSBOG00000018280	EFL1	100	89.894	ENSMUSG00000038563	Efl1	100	94.017	Mus_musculus
ENSSBOG00000018280	EFL1	100	89.628	MGP_PahariEiJ_G0013157	Efl1	100	93.590	Mus_pahari
ENSSBOG00000018280	EFL1	100	93.333	MGP_SPRETEiJ_G0031038	Efl1	99	90.741	Mus_spretus
ENSSBOG00000018280	EFL1	100	89.096	ENSMPUG00000015494	EFL1	100	89.096	Mustela_putorius_furo
ENSSBOG00000018280	EFL1	100	90.426	ENSNGAG00000017740	Efl1	100	90.426	Nannospalax_galili
ENSSBOG00000018280	EFL1	97	97.110	ENSNLEG00000010679	EFL1	100	97.110	Nomascus_leucogenys
ENSSBOG00000018280	EFL1	63	94.340	ENSMEUG00000012049	-	70	94.340	Notamacropus_eugenii
ENSSBOG00000018280	EFL1	63	90.244	ENSOPRG00000012488	-	63	90.244	Ochotona_princeps
ENSSBOG00000018280	EFL1	100	89.184	ENSODEG00000016193	EFL1	100	89.184	Octodon_degus
ENSSBOG00000018280	EFL1	99	68.291	ENSONIG00000003394	efl1	100	68.198	Oreochromis_niloticus
ENSSBOG00000018280	EFL1	100	90.756	ENSOCUG00000012163	EFL1	100	90.756	Oryctolagus_cuniculus
ENSSBOG00000018280	EFL1	66	63.254	ENSORLG00000020390	efl1	100	63.955	Oryzias_latipes
ENSSBOG00000018280	EFL1	95	72.650	ENSORLG00015012031	efl1	99	66.874	Oryzias_latipes_hsok
ENSSBOG00000018280	EFL1	99	67.231	ENSOMEG00000022784	efl1	99	67.409	Oryzias_melastigma
ENSSBOG00000018280	EFL1	100	91.947	ENSOARG00000014452	EFL1	100	91.947	Ovis_aries
ENSSBOG00000018280	EFL1	100	91.339	ENSPPAG00000039672	EFL1	100	91.339	Pan_paniscus
ENSSBOG00000018280	EFL1	100	90.982	ENSPPRG00000002193	EFL1	100	90.982	Panthera_pardus
ENSSBOG00000018280	EFL1	100	90.804	ENSPTIG00000007053	EFL1	100	90.804	Panthera_tigris_altaica
ENSSBOG00000018280	EFL1	100	97.411	ENSPTRG00000007374	EFL1	100	97.411	Pan_troglodytes
ENSSBOG00000018280	EFL1	100	96.726	ENSPANG00000015635	-	100	96.726	Papio_anubis
ENSSBOG00000018280	EFL1	99	76.062	ENSPKIG00000018456	efl1	100	68.271	Paramormyrops_kingsleyae
ENSSBOG00000018280	EFL1	100	78.897	ENSPSIG00000007790	EFL1	100	78.897	Pelodiscus_sinensis
ENSSBOG00000018280	EFL1	97	61.488	ENSPMAG00000002026	efl1	100	61.395	Petromyzon_marinus
ENSSBOG00000018280	EFL1	100	84.071	ENSPCIG00000004372	EFL1	100	84.071	Phascolarctos_cinereus
ENSSBOG00000018280	EFL1	99	67.553	ENSPFOG00000018687	efl1	99	67.496	Poecilia_formosa
ENSSBOG00000018280	EFL1	99	67.642	ENSPLAG00000001988	efl1	99	67.465	Poecilia_latipinna
ENSSBOG00000018280	EFL1	99	67.376	ENSPMEG00000000402	efl1	99	67.318	Poecilia_mexicana
ENSSBOG00000018280	EFL1	99	67.822	ENSPREG00000022085	efl1	99	67.822	Poecilia_reticulata
ENSSBOG00000018280	EFL1	100	97.589	ENSPPYG00000006724	EFL1	100	97.589	Pongo_abelii
ENSSBOG00000018280	EFL1	100	90.804	ENSPVAG00000003189	EFL1	100	90.804	Pteropus_vampyrus
ENSSBOG00000018280	EFL1	99	63.339	ENSPNYG00000019406	efl1	100	63.524	Pundamilia_nyererei
ENSSBOG00000018280	EFL1	99	70.449	ENSPNAG00000012104	efl1	99	70.403	Pygocentrus_nattereri
ENSSBOG00000018280	EFL1	100	89.805	ENSRNOG00000032723	Efl1	100	89.805	Rattus_norvegicus
ENSSBOG00000018280	EFL1	100	97.007	ENSRBIG00000040576	EFL1	100	97.007	Rhinopithecus_bieti
ENSSBOG00000018280	EFL1	100	93.304	ENSRROG00000031475	EFL1	100	93.304	Rhinopithecus_roxellana
ENSSBOG00000018280	EFL1	96	46.316	YNL163C	RIA1	86	46.833	Saccharomyces_cerevisiae
ENSSBOG00000018280	EFL1	100	79.541	ENSSHAG00000018863	EFL1	100	79.541	Sarcophilus_harrisii
ENSSBOG00000018280	EFL1	100	70.583	ENSSFOG00015016244	efl1	100	70.583	Scleropages_formosus
ENSSBOG00000018280	EFL1	99	67.673	ENSSMAG00000016928	efl1	99	67.673	Scophthalmus_maximus
ENSSBOG00000018280	EFL1	99	68.435	ENSSDUG00000013271	efl1	99	68.347	Seriola_dumerili
ENSSBOG00000018280	EFL1	99	68.700	ENSSLDG00000014655	efl1	99	68.612	Seriola_lalandi_dorsalis
ENSSBOG00000018280	EFL1	100	77.185	ENSSPUG00000000941	EFL1	100	77.185	Sphenodon_punctatus
ENSSBOG00000018280	EFL1	99	67.926	ENSSPAG00000011885	efl1	99	67.838	Stegastes_partitus
ENSSBOG00000018280	EFL1	100	91.844	ENSSSCG00000001792	EFL1	100	91.844	Sus_scrofa
ENSSBOG00000018280	EFL1	100	78.280	ENSTGUG00000007850	EFL1	100	78.280	Taeniopygia_guttata
ENSSBOG00000018280	EFL1	100	61.140	ENSTNIG00000003399	efl1	100	61.140	Tetraodon_nigroviridis
ENSSBOG00000018280	EFL1	77	95.890	ENSTBEG00000011804	EFL1	79	95.890	Tupaia_belangeri
ENSSBOG00000018280	EFL1	100	91.882	ENSTTRG00000011243	EFL1	100	91.882	Tursiops_truncatus
ENSSBOG00000018280	EFL1	100	92.730	ENSUAMG00000022106	EFL1	100	92.730	Ursus_americanus
ENSSBOG00000018280	EFL1	100	92.908	ENSUMAG00000010303	EFL1	100	92.908	Ursus_maritimus
ENSSBOG00000018280	EFL1	94	96.721	ENSVPAG00000005735	EFL1	93	96.721	Vicugna_pacos
ENSSBOG00000018280	EFL1	100	91.223	ENSVVUG00000004967	EFL1	100	91.223	Vulpes_vulpes
ENSSBOG00000018280	EFL1	100	74.579	ENSXETG00000015701	EFL1	100	74.779	Xenopus_tropicalis
ENSSBOG00000018280	EFL1	100	67.493	ENSXMAG00000023705	efl1	100	67.551	Xiphophorus_maculatus