EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000018911 (Gene tree)
Gene ID: 101050081
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 45737 bases
Position: chrJH378120.1:1920172-1965908
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000004558	MRP-S27	PF10037.9	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000021009	PTCD2-201	2602	XM_010336532	ENSSBOP00000004558	383 (aa)	XP_010334834	A0A2K6SB01
ENSSBOT00000021017	PTCD2-202	840	-	ENSSBOP00000004566	279 (aa)	-	A0A2K6SB07
ENSSBOT00000021024	PTCD2-203	651	XM_010336531	ENSSBOP00000004573	216 (aa)	XP_010334833	A0A2K6SB16

Gene Model

Click here to download ENSSBOG00000018911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000018911's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000018911	PTCD2	100	85.901	ENSG00000049883	PTCD2	99	85.901	Homo_sapiens
ENSSBOG00000018911	PTCD2	91	47.550	ENSAPOG00000020682	ptcd2	91	47.550	Acanthochromis_polyacanthus
ENSSBOG00000018911	PTCD2	100	77.807	ENSAMEG00000007194	PTCD2	99	77.807	Ailuropoda_melanoleuca
ENSSBOG00000018911	PTCD2	90	40.401	ENSACIG00000002053	ptcd2	100	40.401	Amphilophus_citrinellus
ENSSBOG00000018911	PTCD2	98	45.093	ENSAOCG00000006616	ptcd2	96	45.093	Amphiprion_ocellaris
ENSSBOG00000018911	PTCD2	91	46.686	ENSAPEG00000022926	ptcd2	89	46.686	Amphiprion_percula
ENSSBOG00000018911	PTCD2	99	55.937	ENSACAG00000009747	PTCD2	95	55.937	Anolis_carolinensis
ENSSBOG00000018911	PTCD2	100	93.211	ENSANAG00000029353	PTCD2	99	93.211	Aotus_nancymaae
ENSSBOG00000018911	PTCD2	98	41.910	ENSACLG00000027742	ptcd2	94	41.910	Astatotilapia_calliptera
ENSSBOG00000018911	PTCD2	86	44.207	ENSAMXG00000029404	ptcd2	88	44.207	Astyanax_mexicanus
ENSSBOG00000018911	PTCD2	100	79.688	ENSBTAG00000014675	PTCD2	100	79.688	Bos_taurus
ENSSBOG00000018911	PTCD2	100	91.906	ENSCJAG00000016364	PTCD2	99	91.906	Callithrix_jacchus
ENSSBOG00000018911	PTCD2	100	76.823	ENSCAFG00000007982	PTCD2	90	76.823	Canis_familiaris
ENSSBOG00000018911	PTCD2	91	78.161	ENSCAFG00020019147	PTCD2	98	78.161	Canis_lupus_dingo
ENSSBOG00000018911	PTCD2	100	80.469	ENSCHIG00000017118	PTCD2	100	80.469	Capra_hircus
ENSSBOG00000018911	PTCD2	100	73.890	ENSCPOG00000040168	PTCD2	100	73.890	Cavia_porcellus
ENSSBOG00000018911	PTCD2	100	91.906	ENSCCAG00000029389	-	99	91.906	Cebus_capucinus
ENSSBOG00000018911	PTCD2	83	84.953	ENSCCAG00000021996	-	98	84.953	Cebus_capucinus
ENSSBOG00000018911	PTCD2	100	84.334	ENSCATG00000019069	PTCD2	100	84.334	Cercocebus_atys
ENSSBOG00000018911	PTCD2	100	73.368	ENSCLAG00000000072	PTCD2	100	73.368	Chinchilla_lanigera
ENSSBOG00000018911	PTCD2	100	86.945	ENSCSAG00000015623	PTCD2	100	86.945	Chlorocebus_sabaeus
ENSSBOG00000018911	PTCD2	90	56.609	ENSCHOG00000010634	PTCD2	100	56.609	Choloepus_hoffmanni
ENSSBOG00000018911	PTCD2	100	54.427	ENSCPBG00000000216	PTCD2	98	54.427	Chrysemys_picta_bellii
ENSSBOG00000018911	PTCD2	100	84.856	ENSCANG00000035636	PTCD2	99	84.856	Colobus_angolensis_palliatus
ENSSBOG00000018911	PTCD2	100	73.368	ENSCGRG00001015289	Ptcd2	84	73.368	Cricetulus_griseus_chok1gshd
ENSSBOG00000018911	PTCD2	100	73.368	ENSCGRG00000006193	Ptcd2	84	73.368	Cricetulus_griseus_crigri
ENSSBOG00000018911	PTCD2	91	44.160	ENSCVAG00000001285	ptcd2	89	44.160	Cyprinodon_variegatus
ENSSBOG00000018911	PTCD2	97	44.533	ENSDARG00000035391	ptcd2	97	44.533	Danio_rerio
ENSSBOG00000018911	PTCD2	100	75.457	ENSDNOG00000008719	PTCD2	100	75.457	Dasypus_novemcinctus
ENSSBOG00000018911	PTCD2	100	75.452	ENSDORG00000004921	Ptcd2	100	75.452	Dipodomys_ordii
ENSSBOG00000018911	PTCD2	100	66.927	ENSETEG00000016542	PTCD2	99	66.927	Echinops_telfairi
ENSSBOG00000018911	PTCD2	100	78.590	ENSEASG00005018038	PTCD2	100	78.590	Equus_asinus_asinus
ENSSBOG00000018911	PTCD2	100	78.329	ENSECAG00000007022	PTCD2	98	78.329	Equus_caballus
ENSSBOG00000018911	PTCD2	100	71.802	ENSEEUG00000014031	PTCD2	99	71.802	Erinaceus_europaeus
ENSSBOG00000018911	PTCD2	99	47.120	ENSELUG00000003584	ptcd2	99	47.120	Esox_lucius
ENSSBOG00000018911	PTCD2	100	71.279	ENSFCAG00000045432	PTCD2	82	71.279	Felis_catus
ENSSBOG00000018911	PTCD2	85	50.765	ENSFALG00000010299	PTCD2	99	50.765	Ficedula_albicollis
ENSSBOG00000018911	PTCD2	100	74.151	ENSFDAG00000018461	PTCD2	100	74.151	Fukomys_damarensis
ENSSBOG00000018911	PTCD2	91	49.429	ENSGMOG00000003637	ptcd2	91	49.429	Gadus_morhua
ENSSBOG00000018911	PTCD2	92	50.000	ENSGALG00000038260	PTCD2	93	50.000	Gallus_gallus
ENSSBOG00000018911	PTCD2	99	56.806	ENSGAGG00000021952	PTCD2	98	56.806	Gopherus_agassizii
ENSSBOG00000018911	PTCD2	100	86.162	ENSGGOG00000010695	PTCD2	99	86.162	Gorilla_gorilla
ENSSBOG00000018911	PTCD2	98	41.910	ENSHBUG00000009191	ptcd2	94	41.910	Haplochromis_burtoni
ENSSBOG00000018911	PTCD2	100	74.674	ENSHGLG00000001234	PTCD2	100	74.674	Heterocephalus_glaber_female
ENSSBOG00000018911	PTCD2	100	74.674	ENSHGLG00100015419	PTCD2	100	74.674	Heterocephalus_glaber_male
ENSSBOG00000018911	PTCD2	98	45.093	ENSHCOG00000001703	ptcd2	95	45.093	Hippocampus_comes
ENSSBOG00000018911	PTCD2	85	44.343	ENSIPUG00000006080	ptcd2	91	44.413	Ictalurus_punctatus
ENSSBOG00000018911	PTCD2	99	76.702	ENSSTOG00000006596	PTCD2	99	76.702	Ictidomys_tridecemlineatus
ENSSBOG00000018911	PTCD2	100	76.501	ENSJJAG00000024388	Ptcd2	100	76.501	Jaculus_jaculus
ENSSBOG00000018911	PTCD2	98	40.800	ENSKMAG00000009329	ptcd2	97	40.800	Kryptolebias_marmoratus
ENSSBOG00000018911	PTCD2	98	43.501	ENSLBEG00000024871	ptcd2	94	43.501	Labrus_bergylta
ENSSBOG00000018911	PTCD2	98	52.394	ENSLOCG00000011122	ptcd2	94	53.889	Lepisosteus_oculatus
ENSSBOG00000018911	PTCD2	81	78.135	ENSLAFG00000004115	PTCD2	100	78.135	Loxodonta_africana
ENSSBOG00000018911	PTCD2	100	84.856	ENSMFAG00000031516	PTCD2	99	84.856	Macaca_fascicularis
ENSSBOG00000018911	PTCD2	100	84.595	ENSMNEG00000007537	PTCD2	100	84.595	Macaca_nemestrina
ENSSBOG00000018911	PTCD2	100	84.595	ENSMLEG00000031093	PTCD2	99	84.595	Mandrillus_leucophaeus
ENSSBOG00000018911	PTCD2	91	47.126	ENSMAMG00000018529	ptcd2	91	47.126	Mastacembelus_armatus
ENSSBOG00000018911	PTCD2	98	41.910	ENSMZEG00005003625	ptcd2	94	41.910	Maylandia_zebra
ENSSBOG00000018911	PTCD2	91	50.432	ENSMGAG00000005033	PTCD2	99	50.432	Meleagris_gallopavo
ENSSBOG00000018911	PTCD2	100	57.963	ENSMAUG00000020253	Ptcd2	100	57.963	Mesocricetus_auratus
ENSSBOG00000018911	PTCD2	100	80.157	ENSMICG00000004535	PTCD2	99	80.157	Microcebus_murinus
ENSSBOG00000018911	PTCD2	100	72.585	ENSMOCG00000019985	Ptcd2	100	72.585	Microtus_ochrogaster
ENSSBOG00000018911	PTCD2	100	55.990	ENSMODG00000001695	PTCD2	100	55.990	Monodelphis_domestica
ENSSBOG00000018911	PTCD2	98	46.524	ENSMALG00000022372	ptcd2	95	46.524	Monopterus_albus
ENSSBOG00000018911	PTCD2	100	72.021	MGP_CAROLIEiJ_G0018829	Ptcd2	100	72.021	Mus_caroli
ENSSBOG00000018911	PTCD2	100	70.984	ENSMUSG00000021650	Ptcd2	100	70.984	Mus_musculus
ENSSBOG00000018911	PTCD2	100	73.890	MGP_PahariEiJ_G0015904	Ptcd2	100	73.890	Mus_pahari
ENSSBOG00000018911	PTCD2	100	71.244	MGP_SPRETEiJ_G0019711	Ptcd2	100	71.244	Mus_spretus
ENSSBOG00000018911	PTCD2	100	78.851	ENSMPUG00000014401	PTCD2	100	78.851	Mustela_putorius_furo
ENSSBOG00000018911	PTCD2	100	76.762	ENSMLUG00000007374	PTCD2	99	76.762	Myotis_lucifugus
ENSSBOG00000018911	PTCD2	100	73.107	ENSNGAG00000005027	Ptcd2	100	73.107	Nannospalax_galili
ENSSBOG00000018911	PTCD2	86	42.727	ENSNBRG00000000092	-	100	42.727	Neolamprologus_brichardi
ENSSBOG00000018911	PTCD2	98	42.175	ENSNBRG00000008174	ptcd2	96	42.175	Neolamprologus_brichardi
ENSSBOG00000018911	PTCD2	100	87.206	ENSNLEG00000004516	PTCD2	99	87.206	Nomascus_leucogenys
ENSSBOG00000018911	PTCD2	82	52.396	ENSMEUG00000014012	-	82	52.396	Notamacropus_eugenii
ENSSBOG00000018911	PTCD2	100	72.846	ENSOPRG00000007290	PTCD2	99	72.846	Ochotona_princeps
ENSSBOG00000018911	PTCD2	100	75.718	ENSODEG00000016417	PTCD2	100	75.718	Octodon_degus
ENSSBOG00000018911	PTCD2	83	43.396	ENSONIG00000011269	ptcd2	90	43.396	Oreochromis_niloticus
ENSSBOG00000018911	PTCD2	95	76.986	ENSOCUG00000007970	PTCD2	100	75.718	Oryctolagus_cuniculus
ENSSBOG00000018911	PTCD2	90	46.705	ENSORLG00000003851	ptcd2	88	46.705	Oryzias_latipes
ENSSBOG00000018911	PTCD2	90	46.132	ENSORLG00020009823	ptcd2	90	46.132	Oryzias_latipes_hni
ENSSBOG00000018911	PTCD2	90	46.132	ENSORLG00015016777	ptcd2	99	46.439	Oryzias_latipes_hsok
ENSSBOG00000018911	PTCD2	94	42.257	ENSOMEG00000012396	ptcd2	92	42.257	Oryzias_melastigma
ENSSBOG00000018911	PTCD2	100	72.846	ENSOGAG00000008390	PTCD2	99	72.846	Otolemur_garnettii
ENSSBOG00000018911	PTCD2	100	80.208	ENSOARG00000005087	PTCD2	99	80.208	Ovis_aries
ENSSBOG00000018911	PTCD2	100	85.901	ENSPPAG00000028480	PTCD2	99	85.901	Pan_paniscus
ENSSBOG00000018911	PTCD2	100	85.640	ENSPTRG00000016968	PTCD2	99	85.640	Pan_troglodytes
ENSSBOG00000018911	PTCD2	90	85.217	ENSPANG00000006611	PTCD2	89	85.217	Papio_anubis
ENSSBOG00000018911	PTCD2	93	46.348	ENSPKIG00000019896	ptcd2	93	46.348	Paramormyrops_kingsleyae
ENSSBOG00000018911	PTCD2	83	58.991	ENSPSIG00000014559	PTCD2	98	58.991	Pelodiscus_sinensis
ENSSBOG00000018911	PTCD2	100	72.727	ENSPEMG00000000884	Ptcd2	100	72.727	Peromyscus_maniculatus_bairdii
ENSSBOG00000018911	PTCD2	100	60.156	ENSPCIG00000029047	PTCD2	100	60.156	Phascolarctos_cinereus
ENSSBOG00000018911	PTCD2	91	43.516	ENSPLAG00000010456	ptcd2	90	43.516	Poecilia_latipinna
ENSSBOG00000018911	PTCD2	91	43.804	ENSPREG00000021797	ptcd2	88	43.804	Poecilia_reticulata
ENSSBOG00000018911	PTCD2	100	75.457	ENSPPYG00000015543	PTCD2	99	75.457	Pongo_abelii
ENSSBOG00000018911	PTCD2	81	66.667	ENSPCAG00000006806	PTCD2	98	66.667	Procavia_capensis
ENSSBOG00000018911	PTCD2	100	76.240	ENSPVAG00000010935	PTCD2	99	76.240	Pteropus_vampyrus
ENSSBOG00000018911	PTCD2	98	41.910	ENSPNYG00000003122	ptcd2	94	41.910	Pundamilia_nyererei
ENSSBOG00000018911	PTCD2	94	47.238	ENSPNAG00000021490	ptcd2	94	47.238	Pygocentrus_nattereri
ENSSBOG00000018911	PTCD2	100	71.503	ENSRNOG00000028403	Ptcd2	100	71.503	Rattus_norvegicus
ENSSBOG00000018911	PTCD2	100	79.634	ENSRBIG00000032929	PTCD2	99	79.634	Rhinopithecus_bieti
ENSSBOG00000018911	PTCD2	100	85.117	ENSRROG00000000080	PTCD2	100	85.117	Rhinopithecus_roxellana
ENSSBOG00000018911	PTCD2	100	60.156	ENSSHAG00000003833	PTCD2	99	60.156	Sarcophilus_harrisii
ENSSBOG00000018911	PTCD2	94	43.889	ENSSFOG00015015415	ptcd2	93	43.889	Scleropages_formosus
ENSSBOG00000018911	PTCD2	91	42.363	ENSSMAG00000010350	ptcd2	90	42.363	Scophthalmus_maximus
ENSSBOG00000018911	PTCD2	98	45.623	ENSSDUG00000008142	ptcd2	91	45.623	Seriola_dumerili
ENSSBOG00000018911	PTCD2	98	45.623	ENSSLDG00000015284	ptcd2	96	45.623	Seriola_lalandi_dorsalis
ENSSBOG00000018911	PTCD2	81	70.227	ENSSARG00000004983	PTCD2	99	70.227	Sorex_araneus
ENSSBOG00000018911	PTCD2	100	51.436	ENSSPUG00000000176	PTCD2	96	51.436	Sphenodon_punctatus
ENSSBOG00000018911	PTCD2	91	45.402	ENSSPAG00000008591	ptcd2	89	45.402	Stegastes_partitus
ENSSBOG00000018911	PTCD2	100	80.940	ENSSSCG00000016975	PTCD2	90	80.940	Sus_scrofa
ENSSBOG00000018911	PTCD2	90	50.725	ENSTGUG00000005705	PTCD2	99	50.725	Taeniopygia_guttata
ENSSBOG00000018911	PTCD2	100	75.718	ENSTBEG00000016559	PTCD2	99	75.718	Tupaia_belangeri
ENSSBOG00000018911	PTCD2	100	80.729	ENSTTRG00000011851	PTCD2	99	80.729	Tursiops_truncatus
ENSSBOG00000018911	PTCD2	100	78.068	ENSUAMG00000007583	PTCD2	90	78.068	Ursus_americanus
ENSSBOG00000018911	PTCD2	100	77.807	ENSUMAG00000007666	PTCD2	100	77.807	Ursus_maritimus
ENSSBOG00000018911	PTCD2	100	79.167	ENSVPAG00000009597	PTCD2	99	79.167	Vicugna_pacos
ENSSBOG00000018911	PTCD2	100	76.762	ENSVVUG00000007299	-	100	76.762	Vulpes_vulpes
ENSSBOG00000018911	PTCD2	94	51.111	ENSXETG00000031652	PTCD2	94	51.111	Xenopus_tropicalis
ENSSBOG00000018911	PTCD2	91	43.228	ENSXMAG00000005940	ptcd2	82	43.228	Xiphophorus_maculatus