EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000018921 (Gene tree)
Gene ID: 101053887
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 2552 bases
Position: chrJH378182.1:10290315-10292866
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000004580	Exo_endo_phos	PF03372.23	4.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000021038	-	45	-	ENSSBOP00000004586	14 (aa)	-	A0A2K6SB28
ENSSBOT00000021031	-	1418	XM_010346284	ENSSBOP00000004580	318 (aa)	XP_010344586	A0A2K6SB18

Gene Model

Click here to download ENSSBOG00000018921's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000018921's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000018921	-	100	83.648	ENSSBOG00000031372	-	100	83.492

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000018921	-	100	98.113	ENSG00000100823	APEX1	100	98.113	Homo_sapiens
ENSSBOG00000018921	-	88	69.892	ENSAPOG00000017002	apex1	91	69.892	Acanthochromis_polyacanthus
ENSSBOG00000018921	-	100	96.226	ENSAMEG00000005418	APEX1	100	96.226	Ailuropoda_melanoleuca
ENSSBOG00000018921	-	87	71.583	ENSACIG00000010653	apex1	94	71.685	Amphilophus_citrinellus
ENSSBOG00000018921	-	88	69.892	ENSAOCG00000009649	apex1	90	69.892	Amphiprion_ocellaris
ENSSBOG00000018921	-	88	69.892	ENSAPEG00000021453	apex1	90	69.892	Amphiprion_percula
ENSSBOG00000018921	-	86	71.898	ENSATEG00000002883	apex1	97	67.405	Anabas_testudineus
ENSSBOG00000018921	-	100	70.186	ENSACAG00000008099	APEX1	100	70.186	Anolis_carolinensis
ENSSBOG00000018921	-	100	99.057	ENSANAG00000030117	APEX1	100	99.057	Aotus_nancymaae
ENSSBOG00000018921	-	86	72.364	ENSACLG00000018441	apex1	99	67.089	Astatotilapia_calliptera
ENSSBOG00000018921	-	100	65.938	ENSAMXG00000034699	apex1	100	65.938	Astyanax_mexicanus
ENSSBOG00000018921	-	100	94.340	ENSBTAG00000002745	APEX1	100	94.340	Bos_taurus
ENSSBOG00000018921	-	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSSBOG00000018921	-	100	99.686	ENSCJAG00000009726	APEX1	100	99.686	Callithrix_jacchus
ENSSBOG00000018921	-	100	96.226	ENSCAFG00000032033	APEX1	100	96.226	Canis_familiaris
ENSSBOG00000018921	-	100	96.226	ENSCAFG00020014377	-	100	96.226	Canis_lupus_dingo
ENSSBOG00000018921	-	54	93.023	ENSCAFG00020023002	-	96	93.023	Canis_lupus_dingo
ENSSBOG00000018921	-	98	75.641	ENSCHIG00000014537	-	99	75.641	Capra_hircus
ENSSBOG00000018921	-	100	94.340	ENSCHIG00000007298	-	100	94.340	Capra_hircus
ENSSBOG00000018921	-	100	95.283	ENSTSYG00000034813	APEX1	100	95.283	Carlito_syrichta
ENSSBOG00000018921	-	85	88.930	ENSCAPG00000016235	APEX1	91	97.881	Cavia_aperea
ENSSBOG00000018921	-	100	95.283	ENSCPOG00000030909	APEX1	100	95.283	Cavia_porcellus
ENSSBOG00000018921	-	100	99.686	ENSCCAG00000033056	-	100	99.686	Cebus_capucinus
ENSSBOG00000018921	-	100	85.535	ENSCCAG00000031931	-	100	85.535	Cebus_capucinus
ENSSBOG00000018921	-	100	97.799	ENSCATG00000015580	APEX1	100	97.799	Cercocebus_atys
ENSSBOG00000018921	-	100	94.969	ENSCLAG00000001002	APEX1	100	94.969	Chinchilla_lanigera
ENSSBOG00000018921	-	100	97.484	ENSCSAG00000016685	-	100	97.484	Chlorocebus_sabaeus
ENSSBOG00000018921	-	100	97.484	ENSCSAG00000016670	-	100	97.484	Chlorocebus_sabaeus
ENSSBOG00000018921	-	100	72.100	ENSCPBG00000009567	APEX1	100	72.100	Chrysemys_picta_bellii
ENSSBOG00000018921	-	93	53.465	ENSCING00000008137	-	84	58.113	Ciona_intestinalis
ENSSBOG00000018921	-	83	51.698	ENSCSAVG00000007144	-	100	52.510	Ciona_savignyi
ENSSBOG00000018921	-	100	97.799	ENSCANG00000030726	APEX1	100	97.799	Colobus_angolensis_palliatus
ENSSBOG00000018921	-	100	92.138	ENSCGRG00001017046	Apex1	100	92.138	Cricetulus_griseus_chok1gshd
ENSSBOG00000018921	-	100	92.138	ENSCGRG00000008984	Apex1	100	92.138	Cricetulus_griseus_crigri
ENSSBOG00000018921	-	99	64.669	ENSCSEG00000017499	apex1	99	65.094	Cynoglossus_semilaevis
ENSSBOG00000018921	-	99	66.772	ENSCVAG00000022075	apex1	99	66.772	Cyprinodon_variegatus
ENSSBOG00000018921	-	100	66.981	ENSDARG00000045843	apex1	100	66.667	Danio_rerio
ENSSBOG00000018921	-	100	89.937	ENSDNOG00000042234	APEX1	95	89.937	Dasypus_novemcinctus
ENSSBOG00000018921	-	100	94.969	ENSDORG00000001616	Apex1	100	94.969	Dipodomys_ordii
ENSSBOG00000018921	-	100	94.340	ENSETEG00000004855	-	100	94.340	Echinops_telfairi
ENSSBOG00000018921	-	75	65.272	ENSEBUG00000000622	-	92	65.272	Eptatretus_burgeri
ENSSBOG00000018921	-	100	96.855	ENSEASG00005017489	APEX1	74	96.855	Equus_asinus_asinus
ENSSBOG00000018921	-	100	96.855	ENSECAG00000022325	APEX1	82	96.855	Equus_caballus
ENSSBOG00000018921	-	91	93.403	ENSEEUG00000012569	APEX1	100	93.403	Erinaceus_europaeus
ENSSBOG00000018921	-	100	65.723	ENSELUG00000021706	apex1	100	65.723	Esox_lucius
ENSSBOG00000018921	-	100	96.855	ENSFCAG00000030869	APEX1	100	96.855	Felis_catus
ENSSBOG00000018921	-	100	94.025	ENSFDAG00000006120	APEX1	100	94.025	Fukomys_damarensis
ENSSBOG00000018921	-	99	68.354	ENSFHEG00000009031	apex1	83	68.354	Fundulus_heteroclitus
ENSSBOG00000018921	-	99	61.950	ENSGMOG00000007943	apex1	99	61.442	Gadus_morhua
ENSSBOG00000018921	-	88	72.401	ENSGAFG00000005311	apex1	99	67.405	Gambusia_affinis
ENSSBOG00000018921	-	99	65.823	ENSGACG00000019497	apex1	99	69.925	Gasterosteus_aculeatus
ENSSBOG00000018921	-	100	71.787	ENSGAGG00000014999	APEX1	100	71.787	Gopherus_agassizii
ENSSBOG00000018921	-	100	98.428	ENSGGOG00000002128	APEX1	100	98.428	Gorilla_gorilla
ENSSBOG00000018921	-	99	66.456	ENSHBUG00000005894	apex1	99	66.246	Haplochromis_burtoni
ENSSBOG00000018921	-	100	94.969	ENSHGLG00000002848	APEX1	100	94.969	Heterocephalus_glaber_female
ENSSBOG00000018921	-	100	94.969	ENSHGLG00100017878	APEX1	100	94.969	Heterocephalus_glaber_male
ENSSBOG00000018921	-	99	66.352	ENSHCOG00000009961	apex1	89	70.968	Hippocampus_comes
ENSSBOG00000018921	-	100	68.025	ENSIPUG00000005799	apex1	100	67.712	Ictalurus_punctatus
ENSSBOG00000018921	-	100	94.340	ENSSTOG00000010096	APEX1	100	94.340	Ictidomys_tridecemlineatus
ENSSBOG00000018921	-	100	84.591	ENSJJAG00000003660	-	100	84.591	Jaculus_jaculus
ENSSBOG00000018921	-	100	94.340	ENSJJAG00000012067	-	100	94.340	Jaculus_jaculus
ENSSBOG00000018921	-	100	80.503	ENSJJAG00000020465	-	96	84.564	Jaculus_jaculus
ENSSBOG00000018921	-	99	66.772	ENSKMAG00000021171	apex1	99	66.772	Kryptolebias_marmoratus
ENSSBOG00000018921	-	88	68.817	ENSLBEG00000010248	apex1	90	68.817	Labrus_bergylta
ENSSBOG00000018921	-	100	67.601	ENSLACG00000008617	APEX1	100	66.981	Latimeria_chalumnae
ENSSBOG00000018921	-	100	67.391	ENSLOCG00000015516	apex1	88	72.043	Lepisosteus_oculatus
ENSSBOG00000018921	-	100	94.654	ENSLAFG00000021872	APEX1	100	94.654	Loxodonta_africana
ENSSBOG00000018921	-	100	97.170	ENSMFAG00000002565	APEX1	100	97.170	Macaca_fascicularis
ENSSBOG00000018921	-	100	97.484	ENSMMUG00000048039	APEX1	100	97.484	Macaca_mulatta
ENSSBOG00000018921	-	100	97.484	ENSMNEG00000036944	APEX1	100	97.484	Macaca_nemestrina
ENSSBOG00000018921	-	100	97.799	ENSMLEG00000042125	APEX1	100	97.799	Mandrillus_leucophaeus
ENSSBOG00000018921	-	99	67.089	ENSMAMG00000023526	apex1	99	67.089	Mastacembelus_armatus
ENSSBOG00000018921	-	86	72.364	ENSMZEG00005014187	apex1	99	67.089	Maylandia_zebra
ENSSBOG00000018921	-	100	92.767	ENSMAUG00000013994	Apex1	100	92.767	Mesocricetus_auratus
ENSSBOG00000018921	-	100	95.912	ENSMICG00000043554	APEX1	100	95.912	Microcebus_murinus
ENSSBOG00000018921	-	100	93.082	ENSMOCG00000013721	Apex1	100	93.082	Microtus_ochrogaster
ENSSBOG00000018921	-	88	67.857	ENSMMOG00000010031	apex1	87	67.857	Mola_mola
ENSSBOG00000018921	-	100	84.062	ENSMODG00000007125	APEX1	100	84.375	Monodelphis_domestica
ENSSBOG00000018921	-	88	64.516	ENSMALG00000011699	apex1	75	64.516	Monopterus_albus
ENSSBOG00000018921	-	99	94.637	MGP_CAROLIEiJ_G0019209	Apex1	99	94.637	Mus_caroli
ENSSBOG00000018921	-	100	95.283	ENSMUSG00000035960	Apex1	100	95.283	Mus_musculus
ENSSBOG00000018921	-	100	95.283	MGP_PahariEiJ_G0030232	Apex1	100	95.283	Mus_pahari
ENSSBOG00000018921	-	100	95.283	MGP_SPRETEiJ_G0020101	Apex1	100	95.283	Mus_spretus
ENSSBOG00000018921	-	100	94.688	ENSMLUG00000028957	APEX1	100	94.688	Myotis_lucifugus
ENSSBOG00000018921	-	100	70.440	ENSNGAG00000021748	-	99	70.440	Nannospalax_galili
ENSSBOG00000018921	-	100	93.396	ENSNGAG00000002725	-	100	93.396	Nannospalax_galili
ENSSBOG00000018921	-	86	72.000	ENSNBRG00000005334	apex1	91	66.772	Neolamprologus_brichardi
ENSSBOG00000018921	-	100	97.799	ENSNLEG00000010839	APEX1	100	97.799	Nomascus_leucogenys
ENSSBOG00000018921	-	100	86.792	ENSMEUG00000014519	APEX1	100	85.580	Notamacropus_eugenii
ENSSBOG00000018921	-	100	94.025	ENSOPRG00000014029	APEX1	100	93.711	Ochotona_princeps
ENSSBOG00000018921	-	97	75.728	ENSODEG00000004777	-	99	75.728	Octodon_degus
ENSSBOG00000018921	-	100	72.222	ENSODEG00000006583	-	100	72.222	Octodon_degus
ENSSBOG00000018921	-	100	95.283	ENSODEG00000001703	-	100	95.283	Octodon_degus
ENSSBOG00000018921	-	87	72.302	ENSONIG00000012089	apex1	99	67.405	Oreochromis_niloticus
ENSSBOG00000018921	-	90	82.807	ENSOANG00000008836	APEX1	80	77.469	Ornithorhynchus_anatinus
ENSSBOG00000018921	-	100	96.226	ENSOCUG00000005022	APEX1	100	96.226	Oryctolagus_cuniculus
ENSSBOG00000018921	-	99	67.296	ENSORLG00000012378	apex1	99	66.981	Oryzias_latipes
ENSSBOG00000018921	-	99	67.296	ENSORLG00020021371	apex1	99	66.981	Oryzias_latipes_hni
ENSSBOG00000018921	-	99	67.296	ENSORLG00015020089	apex1	99	66.981	Oryzias_latipes_hsok
ENSSBOG00000018921	-	99	67.296	ENSOMEG00000018876	apex1	99	67.296	Oryzias_melastigma
ENSSBOG00000018921	-	100	94.969	ENSOGAG00000013335	-	100	94.969	Otolemur_garnettii
ENSSBOG00000018921	-	98	84.295	ENSOGAG00000029355	-	100	84.295	Otolemur_garnettii
ENSSBOG00000018921	-	97	89.935	ENSOARG00000001876	-	100	89.935	Ovis_aries
ENSSBOG00000018921	-	100	93.396	ENSOARG00000019740	-	100	93.396	Ovis_aries
ENSSBOG00000018921	-	99	78.797	ENSOARG00000014424	-	100	78.797	Ovis_aries
ENSSBOG00000018921	-	100	98.428	ENSPPAG00000038760	APEX1	100	98.428	Pan_paniscus
ENSSBOG00000018921	-	100	97.170	ENSPPRG00000011794	APEX1	100	97.170	Panthera_pardus
ENSSBOG00000018921	-	100	96.855	ENSPTIG00000014829	APEX1	100	96.855	Panthera_tigris_altaica
ENSSBOG00000018921	-	100	98.428	ENSPTRG00000006093	APEX1	100	98.428	Pan_troglodytes
ENSSBOG00000018921	-	100	97.799	ENSPANG00000022757	APEX1	100	97.799	Papio_anubis
ENSSBOG00000018921	-	87	69.314	ENSPKIG00000003504	apex1	100	64.798	Paramormyrops_kingsleyae
ENSSBOG00000018921	-	76	67.078	ENSPMGG00000016596	apex1	73	67.078	Periophthalmus_magnuspinnatus
ENSSBOG00000018921	-	100	94.654	ENSPEMG00000019097	Apex1	100	94.654	Peromyscus_maniculatus_bairdii
ENSSBOG00000018921	-	94	66.667	ENSPMAG00000007275	-	95	69.039	Petromyzon_marinus
ENSSBOG00000018921	-	100	84.013	ENSPCIG00000023274	APEX1	100	84.112	Phascolarctos_cinereus
ENSSBOG00000018921	-	88	72.760	ENSPFOG00000004178	apex1	90	72.760	Poecilia_formosa
ENSSBOG00000018921	-	88	72.401	ENSPLAG00000012779	apex1	90	72.401	Poecilia_latipinna
ENSSBOG00000018921	-	88	72.760	ENSPMEG00000019623	apex1	90	72.760	Poecilia_mexicana
ENSSBOG00000018921	-	88	72.043	ENSPREG00000014298	apex1	89	72.043	Poecilia_reticulata
ENSSBOG00000018921	-	100	97.799	ENSPPYG00000005565	APEX1	100	97.799	Pongo_abelii
ENSSBOG00000018921	-	100	92.767	ENSPCAG00000010376	APEX1	100	92.767	Procavia_capensis
ENSSBOG00000018921	-	100	95.912	ENSPCOG00000021564	APEX1	100	95.912	Propithecus_coquereli
ENSSBOG00000018921	-	100	95.625	ENSPVAG00000010736	APEX1	100	95.625	Pteropus_vampyrus
ENSSBOG00000018921	-	86	72.364	ENSPNYG00000023940	apex1	99	67.089	Pundamilia_nyererei
ENSSBOG00000018921	-	93	65.878	ENSPNAG00000020897	apex1	96	65.763	Pygocentrus_nattereri
ENSSBOG00000018921	-	100	94.340	ENSRNOG00000009663	Apex1	100	94.340	Rattus_norvegicus
ENSSBOG00000018921	-	100	97.799	ENSRBIG00000038325	APEX1	99	97.799	Rhinopithecus_bieti
ENSSBOG00000018921	-	100	83.951	ENSSHAG00000013524	APEX1	100	83.951	Sarcophilus_harrisii
ENSSBOG00000018921	-	100	63.208	ENSSFOG00015001948	apex1	100	62.579	Scleropages_formosus
ENSSBOG00000018921	-	87	70.144	ENSSMAG00000013348	apex1	99	66.246	Scophthalmus_maximus
ENSSBOG00000018921	-	99	65.823	ENSSDUG00000016377	apex1	99	65.823	Seriola_dumerili
ENSSBOG00000018921	-	99	66.456	ENSSLDG00000023005	apex1	99	66.456	Seriola_lalandi_dorsalis
ENSSBOG00000018921	-	89	73.239	ENSSPUG00000000531	APEX1	96	73.239	Sphenodon_punctatus
ENSSBOG00000018921	-	99	65.506	ENSSPAG00000000458	apex1	99	65.506	Stegastes_partitus
ENSSBOG00000018921	-	96	56.452	ENSSSCG00000039705	-	92	59.859	Sus_scrofa
ENSSBOG00000018921	-	100	94.969	ENSSSCG00000040060	-	100	94.969	Sus_scrofa
ENSSBOG00000018921	-	74	61.017	ENSTGUG00000014378	APEX1	100	61.017	Taeniopygia_guttata
ENSSBOG00000018921	-	87	68.345	ENSTRUG00000004268	apex1	84	68.459	Takifugu_rubripes
ENSSBOG00000018921	-	99	64.241	ENSTNIG00000005778	apex1	99	64.241	Tetraodon_nigroviridis
ENSSBOG00000018921	-	100	91.824	ENSTBEG00000006405	APEX1	100	91.824	Tupaia_belangeri
ENSSBOG00000018921	-	74	95.763	ENSTTRG00000007860	APEX1	100	95.763	Tursiops_truncatus
ENSSBOG00000018921	-	100	95.912	ENSUAMG00000010457	APEX1	100	95.912	Ursus_americanus
ENSSBOG00000018921	-	100	95.912	ENSUMAG00000009178	APEX1	100	95.912	Ursus_maritimus
ENSSBOG00000018921	-	74	91.102	ENSVPAG00000005083	APEX1	100	91.102	Vicugna_pacos
ENSSBOG00000018921	-	100	95.597	ENSVVUG00000009010	APEX1	100	95.597	Vulpes_vulpes
ENSSBOG00000018921	-	100	66.771	ENSXETG00000024773	apex1	100	66.771	Xenopus_tropicalis
ENSSBOG00000018921	-	88	72.401	ENSXCOG00000015233	apex1	89	72.401	Xiphophorus_couchianus
ENSSBOG00000018921	-	100	67.296	ENSXMAG00000006195	apex1	90	72.401	Xiphophorus_maculatus