EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000019029 (Gene tree)
Gene ID: 101042480
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chrJH378133.1:17445609-17448344
Accession: 6601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000004759	RNA_ligase	PF09414.10	5.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000021220	LIG4-201	2736	XM_010338830	ENSSBOP00000004759	911 (aa)	XP_010337132	A0A2K6SBK8

Gene Model

Click here to download ENSSBOG00000019029's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000019029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000019029	LIG4	100	95.060	ENSG00000174405	LIG4	100	95.060	Homo_sapiens
ENSSBOG00000019029	LIG4	99	65.532	ENSAPOG00000000866	lig4	99	65.752	Acanthochromis_polyacanthus
ENSSBOG00000019029	LIG4	100	87.596	ENSAMEG00000019685	LIG4	99	87.596	Ailuropoda_melanoleuca
ENSSBOG00000019029	LIG4	99	65.787	ENSACIG00000018309	lig4	99	66.007	Amphilophus_citrinellus
ENSSBOG00000019029	LIG4	99	65.532	ENSAOCG00000011768	lig4	99	65.752	Amphiprion_ocellaris
ENSSBOG00000019029	LIG4	99	65.642	ENSAPEG00000017815	lig4	99	65.862	Amphiprion_percula
ENSSBOG00000019029	LIG4	99	65.055	ENSATEG00000005583	lig4	99	65.165	Anabas_testudineus
ENSSBOG00000019029	LIG4	97	74.773	ENSAPLG00000001673	LIG4	99	74.773	Anas_platyrhynchos
ENSSBOG00000019029	LIG4	99	75.526	ENSACAG00000014566	LIG4	99	75.526	Anolis_carolinensis
ENSSBOG00000019029	LIG4	100	97.585	ENSANAG00000012446	LIG4	100	97.585	Aotus_nancymaae
ENSSBOG00000019029	LIG4	99	65.237	ENSACLG00000027051	lig4	99	65.237	Astatotilapia_calliptera
ENSSBOG00000019029	LIG4	99	63.786	ENSAMXG00000008192	lig4	94	63.786	Astyanax_mexicanus
ENSSBOG00000019029	LIG4	100	87.267	ENSBTAG00000015868	LIG4	100	87.267	Bos_taurus
ENSSBOG00000019029	LIG4	100	96.597	ENSCJAG00000014689	LIG4	100	96.597	Callithrix_jacchus
ENSSBOG00000019029	LIG4	100	88.913	ENSCAFG00000006031	LIG4	100	88.913	Canis_familiaris
ENSSBOG00000019029	LIG4	100	88.913	ENSCAFG00020021230	LIG4	100	88.913	Canis_lupus_dingo
ENSSBOG00000019029	LIG4	100	87.267	ENSCHIG00000001019	LIG4	100	87.267	Capra_hircus
ENSSBOG00000019029	LIG4	99	87.597	ENSCAPG00000006284	LIG4	99	87.597	Cavia_aperea
ENSSBOG00000019029	LIG4	100	87.596	ENSCPOG00000014266	LIG4	100	87.596	Cavia_porcellus
ENSSBOG00000019029	LIG4	100	96.707	ENSCCAG00000019971	LIG4	100	96.707	Cebus_capucinus
ENSSBOG00000019029	LIG4	100	94.402	ENSCATG00000021075	LIG4	100	94.402	Cercocebus_atys
ENSSBOG00000019029	LIG4	100	88.364	ENSCLAG00000003376	LIG4	100	88.364	Chinchilla_lanigera
ENSSBOG00000019029	LIG4	100	94.731	ENSCSAG00000000211	LIG4	100	94.731	Chlorocebus_sabaeus
ENSSBOG00000019029	LIG4	99	78.808	ENSCPBG00000023291	LIG4	100	78.214	Chrysemys_picta_bellii
ENSSBOG00000019029	LIG4	68	45.310	ENSCING00000009536	-	95	45.310	Ciona_intestinalis
ENSSBOG00000019029	LIG4	83	45.204	ENSCSAVG00000010336	-	98	45.204	Ciona_savignyi
ENSSBOG00000019029	LIG4	100	94.731	ENSCANG00000005805	LIG4	100	94.731	Colobus_angolensis_palliatus
ENSSBOG00000019029	LIG4	100	85.746	ENSCGRG00001012072	Lig4	100	85.746	Cricetulus_griseus_chok1gshd
ENSSBOG00000019029	LIG4	100	85.746	ENSCGRG00000013417	Lig4	100	85.746	Cricetulus_griseus_crigri
ENSSBOG00000019029	LIG4	97	66.023	ENSCSEG00000013905	lig4	95	66.023	Cynoglossus_semilaevis
ENSSBOG00000019029	LIG4	99	65.891	ENSCVAG00000007896	lig4	99	65.891	Cyprinodon_variegatus
ENSSBOG00000019029	LIG4	99	64.080	ENSDARG00000060620	lig4	98	64.080	Danio_rerio
ENSSBOG00000019029	LIG4	100	89.145	ENSDNOG00000000513	LIG4	100	89.145	Dasypus_novemcinctus
ENSSBOG00000019029	LIG4	100	87.157	ENSDORG00000027303	Lig4	100	87.157	Dipodomys_ordii
ENSSBOG00000019029	LIG4	89	31.059	FBgn0030506	Lig4	90	31.059	Drosophila_melanogaster
ENSSBOG00000019029	LIG4	99	83.703	ENSETEG00000015563	LIG4	100	84.035	Echinops_telfairi
ENSSBOG00000019029	LIG4	99	42.589	ENSEBUG00000014243	lig4	99	42.589	Eptatretus_burgeri
ENSSBOG00000019029	LIG4	100	89.901	ENSEASG00005022073	LIG4	100	89.901	Equus_asinus_asinus
ENSSBOG00000019029	LIG4	100	89.572	ENSECAG00000003257	LIG4	100	89.572	Equus_caballus
ENSSBOG00000019029	LIG4	99	66.262	ENSELUG00000006787	lig4	99	66.373	Esox_lucius
ENSSBOG00000019029	LIG4	100	88.035	ENSFCAG00000031985	LIG4	100	88.035	Felis_catus
ENSSBOG00000019029	LIG4	89	75.277	ENSFALG00000004214	LIG4	98	75.277	Ficedula_albicollis
ENSSBOG00000019029	LIG4	100	87.925	ENSFDAG00000008973	LIG4	100	87.925	Fukomys_damarensis
ENSSBOG00000019029	LIG4	99	64.784	ENSFHEG00000007398	lig4	89	64.784	Fundulus_heteroclitus
ENSSBOG00000019029	LIG4	85	64.744	ENSGMOG00000012843	lig4	99	64.744	Gadus_morhua
ENSSBOG00000019029	LIG4	100	74.454	ENSGALG00000016854	LIG4	100	74.454	Gallus_gallus
ENSSBOG00000019029	LIG4	99	65.145	ENSGAFG00000019779	lig4	95	65.165	Gambusia_affinis
ENSSBOG00000019029	LIG4	99	63.344	ENSGACG00000014135	lig4	99	63.344	Gasterosteus_aculeatus
ENSSBOG00000019029	LIG4	100	94.951	ENSGGOG00000027771	LIG4	100	94.951	Gorilla_gorilla
ENSSBOG00000019029	LIG4	99	65.017	ENSHBUG00000006245	lig4	99	65.017	Haplochromis_burtoni
ENSSBOG00000019029	LIG4	100	88.145	ENSHGLG00000000718	LIG4	100	88.145	Heterocephalus_glaber_female
ENSSBOG00000019029	LIG4	100	88.145	ENSHGLG00100003265	LIG4	100	88.145	Heterocephalus_glaber_male
ENSSBOG00000019029	LIG4	99	64.615	ENSHCOG00000012010	lig4	99	64.615	Hippocampus_comes
ENSSBOG00000019029	LIG4	99	64.435	ENSIPUG00000013748	lig4	99	64.435	Ictalurus_punctatus
ENSSBOG00000019029	LIG4	100	89.243	ENSSTOG00000024303	LIG4	100	89.243	Ictidomys_tridecemlineatus
ENSSBOG00000019029	LIG4	100	86.279	ENSJJAG00000006750	Lig4	100	86.279	Jaculus_jaculus
ENSSBOG00000019029	LIG4	99	65.006	ENSKMAG00000001149	lig4	99	65.006	Kryptolebias_marmoratus
ENSSBOG00000019029	LIG4	91	65.986	ENSLBEG00000014578	lig4	100	66.226	Labrus_bergylta
ENSSBOG00000019029	LIG4	99	71.681	ENSLACG00000003282	LIG4	99	71.681	Latimeria_chalumnae
ENSSBOG00000019029	LIG4	99	69.189	ENSLOCG00000008901	lig4	98	69.189	Lepisosteus_oculatus
ENSSBOG00000019029	LIG4	100	86.418	ENSLAFG00000031152	LIG4	100	86.418	Loxodonta_africana
ENSSBOG00000019029	LIG4	100	94.621	ENSMFAG00000037235	LIG4	100	94.621	Macaca_fascicularis
ENSSBOG00000019029	LIG4	100	94.621	ENSMMUG00000008874	LIG4	100	94.621	Macaca_mulatta
ENSSBOG00000019029	LIG4	100	94.621	ENSMNEG00000023575	LIG4	100	94.621	Macaca_nemestrina
ENSSBOG00000019029	LIG4	100	94.731	ENSMLEG00000026720	LIG4	100	94.731	Mandrillus_leucophaeus
ENSSBOG00000019029	LIG4	99	65.385	ENSMAMG00000008472	lig4	99	65.604	Mastacembelus_armatus
ENSSBOG00000019029	LIG4	99	65.237	ENSMZEG00005001855	lig4	99	65.237	Maylandia_zebra
ENSSBOG00000019029	LIG4	99	75.412	ENSMGAG00000015532	LIG4	99	75.412	Meleagris_gallopavo
ENSSBOG00000019029	LIG4	100	83.425	ENSMOCG00000019000	Lig4	100	83.425	Microtus_ochrogaster
ENSSBOG00000019029	LIG4	99	65.006	ENSMMOG00000004390	lig4	99	65.006	Mola_mola
ENSSBOG00000019029	LIG4	100	82.656	ENSMODG00000025064	LIG4	100	82.656	Monodelphis_domestica
ENSSBOG00000019029	LIG4	99	65.227	ENSMALG00000008555	lig4	99	65.227	Monopterus_albus
ENSSBOG00000019029	LIG4	100	86.169	MGP_CAROLIEiJ_G0030809	Lig4	100	86.169	Mus_caroli
ENSSBOG00000019029	LIG4	100	86.169	ENSMUSG00000049717	Lig4	100	86.169	Mus_musculus
ENSSBOG00000019029	LIG4	100	86.169	MGP_PahariEiJ_G0021270	Lig4	100	86.169	Mus_pahari
ENSSBOG00000019029	LIG4	100	86.279	MGP_SPRETEiJ_G0031917	Lig4	100	86.279	Mus_spretus
ENSSBOG00000019029	LIG4	100	87.047	ENSMPUG00000018675	LIG4	100	87.047	Mustela_putorius_furo
ENSSBOG00000019029	LIG4	100	90.121	ENSMLUG00000001267	LIG4	100	90.121	Myotis_lucifugus
ENSSBOG00000019029	LIG4	100	86.169	ENSNGAG00000013258	Lig4	100	86.169	Nannospalax_galili
ENSSBOG00000019029	LIG4	99	65.457	ENSNBRG00000021252	lig4	99	65.457	Neolamprologus_brichardi
ENSSBOG00000019029	LIG4	100	94.512	ENSNLEG00000007888	LIG4	100	94.512	Nomascus_leucogenys
ENSSBOG00000019029	LIG4	100	86.937	ENSOPRG00000005765	LIG4	100	86.937	Ochotona_princeps
ENSSBOG00000019029	LIG4	100	86.828	ENSODEG00000019683	LIG4	100	86.828	Octodon_degus
ENSSBOG00000019029	LIG4	99	65.165	ENSONIG00000011969	lig4	98	65.385	Oreochromis_niloticus
ENSSBOG00000019029	LIG4	100	89.682	ENSOCUG00000015734	LIG4	100	89.682	Oryctolagus_cuniculus
ENSSBOG00000019029	LIG4	99	63.846	ENSORLG00000004041	lig4	99	64.066	Oryzias_latipes
ENSSBOG00000019029	LIG4	99	64.286	ENSORLG00020019607	lig4	99	64.505	Oryzias_latipes_hni
ENSSBOG00000019029	LIG4	99	63.956	ENSORLG00015017754	lig4	99	64.176	Oryzias_latipes_hsok
ENSSBOG00000019029	LIG4	74	69.822	ENSOMEG00000003459	lig4	98	69.822	Oryzias_melastigma
ENSSBOG00000019029	LIG4	100	90.789	ENSOGAG00000032120	LIG4	99	90.789	Otolemur_garnettii
ENSSBOG00000019029	LIG4	82	89.262	ENSOARG00000005590	LIG4	98	89.262	Ovis_aries
ENSSBOG00000019029	LIG4	100	94.402	ENSPPAG00000032998	LIG4	100	94.402	Pan_paniscus
ENSSBOG00000019029	LIG4	100	88.584	ENSPPRG00000017804	LIG4	100	88.584	Panthera_pardus
ENSSBOG00000019029	LIG4	100	88.474	ENSPTIG00000010051	LIG4	100	88.474	Panthera_tigris_altaica
ENSSBOG00000019029	LIG4	100	94.512	ENSPTRG00000006025	LIG4	100	94.512	Pan_troglodytes
ENSSBOG00000019029	LIG4	100	94.512	ENSPANG00000007562	LIG4	100	94.512	Papio_anubis
ENSSBOG00000019029	LIG4	99	66.191	ENSPKIG00000011645	lig4	98	66.191	Paramormyrops_kingsleyae
ENSSBOG00000019029	LIG4	99	78.132	ENSPSIG00000001504	LIG4	99	78.132	Pelodiscus_sinensis
ENSSBOG00000019029	LIG4	99	63.000	ENSPMGG00000013486	lig4	99	62.569	Periophthalmus_magnuspinnatus
ENSSBOG00000019029	LIG4	100	85.746	ENSPEMG00000000076	Lig4	100	85.746	Peromyscus_maniculatus_bairdii
ENSSBOG00000019029	LIG4	100	82.108	ENSPCIG00000021882	LIG4	100	82.108	Phascolarctos_cinereus
ENSSBOG00000019029	LIG4	99	65.295	ENSPFOG00000000797	lig4	99	65.055	Poecilia_formosa
ENSSBOG00000019029	LIG4	99	65.184	ENSPLAG00000001196	lig4	99	64.945	Poecilia_latipinna
ENSSBOG00000019029	LIG4	99	65.295	ENSPMEG00000021353	lig4	99	65.165	Poecilia_mexicana
ENSSBOG00000019029	LIG4	99	65.072	ENSPREG00000007323	lig4	99	65.093	Poecilia_reticulata
ENSSBOG00000019029	LIG4	100	94.951	ENSPPYG00000005540	LIG4	100	94.951	Pongo_abelii
ENSSBOG00000019029	LIG4	100	89.243	ENSPVAG00000016403	LIG4	100	89.243	Pteropus_vampyrus
ENSSBOG00000019029	LIG4	99	65.127	ENSPNYG00000009660	lig4	99	65.127	Pundamilia_nyererei
ENSSBOG00000019029	LIG4	100	64.145	ENSPNAG00000028069	LIG4	100	64.145	Pygocentrus_nattereri
ENSSBOG00000019029	LIG4	100	64.145	ENSPNAG00000028056	lig4	100	64.145	Pygocentrus_nattereri
ENSSBOG00000019029	LIG4	100	84.852	ENSRNOG00000014605	Lig4	100	84.852	Rattus_norvegicus
ENSSBOG00000019029	LIG4	100	93.414	ENSRBIG00000039962	LIG4	100	93.414	Rhinopithecus_bieti
ENSSBOG00000019029	LIG4	100	94.402	ENSRROG00000006040	LIG4	100	94.402	Rhinopithecus_roxellana
ENSSBOG00000019029	LIG4	100	79.693	ENSSHAG00000009525	LIG4	100	79.693	Sarcophilus_harrisii
ENSSBOG00000019029	LIG4	100	64.410	ENSSFOG00015012835	lig4	100	64.410	Scleropages_formosus
ENSSBOG00000019029	LIG4	99	62.901	ENSSMAG00000011267	lig4	99	62.901	Scophthalmus_maximus
ENSSBOG00000019029	LIG4	99	66.186	ENSSDUG00000010343	lig4	98	66.186	Seriola_dumerili
ENSSBOG00000019029	LIG4	99	64.286	ENSSLDG00000003239	lig4	99	64.286	Seriola_lalandi_dorsalis
ENSSBOG00000019029	LIG4	100	81.729	ENSSARG00000006573	LIG4	100	81.729	Sorex_araneus
ENSSBOG00000019029	LIG4	93	76.422	ENSSPUG00000002444	LIG4	100	76.422	Sphenodon_punctatus
ENSSBOG00000019029	LIG4	99	65.165	ENSSPAG00000001609	lig4	99	65.165	Stegastes_partitus
ENSSBOG00000019029	LIG4	100	87.047	ENSSSCG00000009540	LIG4	100	87.047	Sus_scrofa
ENSSBOG00000019029	LIG4	99	74.226	ENSTGUG00000010795	LIG4	99	74.226	Taeniopygia_guttata
ENSSBOG00000019029	LIG4	99	65.604	ENSTRUG00000009984	lig4	99	65.604	Takifugu_rubripes
ENSSBOG00000019029	LIG4	99	65.275	ENSTNIG00000010348	lig4	99	65.495	Tetraodon_nigroviridis
ENSSBOG00000019029	LIG4	100	89.572	ENSTBEG00000017741	LIG4	100	89.572	Tupaia_belangeri
ENSSBOG00000019029	LIG4	100	88.255	ENSTTRG00000012660	LIG4	100	88.255	Tursiops_truncatus
ENSSBOG00000019029	LIG4	100	87.706	ENSUAMG00000003773	LIG4	100	87.706	Ursus_americanus
ENSSBOG00000019029	LIG4	99	71.696	ENSXETG00000002654	lig4	99	71.696	Xenopus_tropicalis
ENSSBOG00000019029	LIG4	99	65.184	ENSXCOG00000017401	lig4	99	64.725	Xiphophorus_couchianus
ENSSBOG00000019029	LIG4	99	65.444	ENSXMAG00000015142	lig4	99	64.984	Xiphophorus_maculatus