EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000019135 (Gene tree)
Gene ID: 101052910
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 22122 bases
Position: chrJH378164.1:7695935-7718056
Accession: 21185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000004909	CAF1	PF04857.20	1.2e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000021395	PNLDC1-201	1815	XM_003933773	ENSSBOP00000004909	531 (aa)	XP_003933822	A0A2K6SBZ7

Gene Model

Click here to download ENSSBOG00000019135's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000019135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000019135	PNLDC1	99	94.151	ENSG00000146453	PNLDC1	99	94.151	Homo_sapiens
ENSSBOG00000019135	PNLDC1	99	86.364	ENSAMEG00000015371	PNLDC1	99	86.364	Ailuropoda_melanoleuca
ENSSBOG00000019135	PNLDC1	95	57.843	ENSAPLG00000007014	PNLDC1	97	57.843	Anas_platyrhynchos
ENSSBOG00000019135	PNLDC1	99	59.887	ENSACAG00000013667	PNLDC1	99	59.887	Anolis_carolinensis
ENSSBOG00000019135	PNLDC1	100	97.928	ENSANAG00000034713	PNLDC1	100	97.928	Aotus_nancymaae
ENSSBOG00000019135	PNLDC1	95	86.957	ENSBTAG00000015166	PNLDC1	96	86.957	Bos_taurus
ENSSBOG00000019135	PNLDC1	100	97.175	ENSCJAG00000011865	PNLDC1	100	97.175	Callithrix_jacchus
ENSSBOG00000019135	PNLDC1	100	87.382	ENSCAFG00000000740	PNLDC1	100	87.382	Canis_familiaris
ENSSBOG00000019135	PNLDC1	100	85.178	ENSCAFG00020017742	PNLDC1	100	85.178	Canis_lupus_dingo
ENSSBOG00000019135	PNLDC1	100	84.586	ENSCHIG00000003141	PNLDC1	100	84.586	Capra_hircus
ENSSBOG00000019135	PNLDC1	100	89.454	ENSTSYG00000005606	PNLDC1	100	89.454	Carlito_syrichta
ENSSBOG00000019135	PNLDC1	100	60.902	ENSCAPG00000011893	PNLDC1	100	60.902	Cavia_aperea
ENSSBOG00000019135	PNLDC1	100	78.008	ENSCPOG00000019565	PNLDC1	100	78.008	Cavia_porcellus
ENSSBOG00000019135	PNLDC1	100	98.870	ENSCCAG00000026232	PNLDC1	100	98.870	Cebus_capucinus
ENSSBOG00000019135	PNLDC1	100	93.220	ENSCATG00000033196	PNLDC1	100	93.220	Cercocebus_atys
ENSSBOG00000019135	PNLDC1	99	82.264	ENSCLAG00000003228	PNLDC1	99	82.264	Chinchilla_lanigera
ENSSBOG00000019135	PNLDC1	95	92.927	ENSCSAG00000012478	PNLDC1	98	92.927	Chlorocebus_sabaeus
ENSSBOG00000019135	PNLDC1	96	64.648	ENSCPBG00000004050	PNLDC1	100	64.648	Chrysemys_picta_bellii
ENSSBOG00000019135	PNLDC1	95	93.478	ENSCANG00000043076	PNLDC1	97	93.478	Colobus_angolensis_palliatus
ENSSBOG00000019135	PNLDC1	100	66.102	ENSCGRG00001011981	-	99	66.102	Cricetulus_griseus_chok1gshd
ENSSBOG00000019135	PNLDC1	100	81.544	ENSCGRG00001007470	-	99	81.544	Cricetulus_griseus_chok1gshd
ENSSBOG00000019135	PNLDC1	100	68.550	ENSCGRG00000003103	-	99	68.550	Cricetulus_griseus_crigri
ENSSBOG00000019135	PNLDC1	100	81.544	ENSCGRG00000010221	-	99	81.544	Cricetulus_griseus_crigri
ENSSBOG00000019135	PNLDC1	100	84.211	ENSDNOG00000013709	PNLDC1	100	84.211	Dasypus_novemcinctus
ENSSBOG00000019135	PNLDC1	100	79.401	ENSDORG00000011517	Pnldc1	99	87.220	Dipodomys_ordii
ENSSBOG00000019135	PNLDC1	93	75.101	ENSETEG00000007587	PNLDC1	99	75.101	Echinops_telfairi
ENSSBOG00000019135	PNLDC1	100	79.444	ENSEASG00005019029	PNLDC1	100	79.444	Equus_asinus_asinus
ENSSBOG00000019135	PNLDC1	100	87.759	ENSECAG00000012898	PNLDC1	100	87.759	Equus_caballus
ENSSBOG00000019135	PNLDC1	67	90.625	ENSEEUG00000005717	-	86	90.625	Erinaceus_europaeus
ENSSBOG00000019135	PNLDC1	100	87.006	ENSFCAG00000002848	PNLDC1	100	87.006	Felis_catus
ENSSBOG00000019135	PNLDC1	94	57.455	ENSFALG00000012081	PNLDC1	99	57.455	Ficedula_albicollis
ENSSBOG00000019135	PNLDC1	100	83.427	ENSFDAG00000021334	PNLDC1	100	83.427	Fukomys_damarensis
ENSSBOG00000019135	PNLDC1	79	57.957	ENSGALG00000011624	PNLDC1	82	57.957	Gallus_gallus
ENSSBOG00000019135	PNLDC1	99	64.906	ENSGAGG00000015276	PNLDC1	100	66.116	Gopherus_agassizii
ENSSBOG00000019135	PNLDC1	100	93.974	ENSGGOG00000014077	PNLDC1	100	93.974	Gorilla_gorilla
ENSSBOG00000019135	PNLDC1	100	84.369	ENSHGLG00000006889	PNLDC1	100	84.369	Heterocephalus_glaber_female
ENSSBOG00000019135	PNLDC1	100	84.369	ENSHGLG00100018275	PNLDC1	100	84.369	Heterocephalus_glaber_male
ENSSBOG00000019135	PNLDC1	99	88.091	ENSSTOG00000005595	PNLDC1	99	88.091	Ictidomys_tridecemlineatus
ENSSBOG00000019135	PNLDC1	100	79.661	ENSJJAG00000009937	Pnldc1	99	79.661	Jaculus_jaculus
ENSSBOG00000019135	PNLDC1	59	85.079	ENSLAFG00000030189	PNLDC1	92	85.079	Loxodonta_africana
ENSSBOG00000019135	PNLDC1	100	93.597	ENSMFAG00000041296	PNLDC1	100	93.597	Macaca_fascicularis
ENSSBOG00000019135	PNLDC1	100	93.597	ENSMMUG00000004181	PNLDC1	100	93.597	Macaca_mulatta
ENSSBOG00000019135	PNLDC1	100	93.409	ENSMNEG00000034271	PNLDC1	100	93.409	Macaca_nemestrina
ENSSBOG00000019135	PNLDC1	100	90.019	ENSMLEG00000044059	PNLDC1	100	90.019	Mandrillus_leucophaeus
ENSSBOG00000019135	PNLDC1	95	57.874	ENSMGAG00000012470	PNLDC1	97	57.874	Meleagris_gallopavo
ENSSBOG00000019135	PNLDC1	99	67.481	ENSMAUG00000012298	Pnldc1	100	67.481	Mesocricetus_auratus
ENSSBOG00000019135	PNLDC1	100	89.454	ENSMICG00000008021	PNLDC1	100	89.454	Microcebus_murinus
ENSSBOG00000019135	PNLDC1	100	85.929	ENSMOCG00000014287	Pnldc1	100	85.929	Microtus_ochrogaster
ENSSBOG00000019135	PNLDC1	99	74.858	ENSMODG00000007420	PNLDC1	99	74.858	Monodelphis_domestica
ENSSBOG00000019135	PNLDC1	100	85.499	MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.499	Mus_caroli
ENSSBOG00000019135	PNLDC1	100	85.876	ENSMUSG00000073460	Pnldc1	100	88.889	Mus_musculus
ENSSBOG00000019135	PNLDC1	100	85.687	MGP_PahariEiJ_G0023361	Pnldc1	100	85.687	Mus_pahari
ENSSBOG00000019135	PNLDC1	100	85.687	MGP_SPRETEiJ_G0021975	Pnldc1	100	85.687	Mus_spretus
ENSSBOG00000019135	PNLDC1	99	85.849	ENSMPUG00000004920	PNLDC1	99	85.849	Mustela_putorius_furo
ENSSBOG00000019135	PNLDC1	100	85.876	ENSMLUG00000000747	PNLDC1	100	85.876	Myotis_lucifugus
ENSSBOG00000019135	PNLDC1	100	86.817	ENSNGAG00000017714	Pnldc1	99	86.817	Nannospalax_galili
ENSSBOG00000019135	PNLDC1	95	92.899	ENSNLEG00000011282	PNLDC1	98	92.899	Nomascus_leucogenys
ENSSBOG00000019135	PNLDC1	60	62.500	ENSMEUG00000011926	-	64	62.500	Notamacropus_eugenii
ENSSBOG00000019135	PNLDC1	54	64.583	ENSMEUG00000014042	-	100	64.583	Notamacropus_eugenii
ENSSBOG00000019135	PNLDC1	79	85.027	ENSOPRG00000003813	PNLDC1	79	85.027	Ochotona_princeps
ENSSBOG00000019135	PNLDC1	100	83.239	ENSODEG00000008047	PNLDC1	100	83.239	Octodon_degus
ENSSBOG00000019135	PNLDC1	99	56.604	ENSOANG00000012199	PNLDC1	99	58.679	Ornithorhynchus_anatinus
ENSSBOG00000019135	PNLDC1	100	86.252	ENSOCUG00000013867	PNLDC1	100	86.252	Oryctolagus_cuniculus
ENSSBOG00000019135	PNLDC1	99	89.414	ENSOGAG00000007331	PNLDC1	100	89.414	Otolemur_garnettii
ENSSBOG00000019135	PNLDC1	100	84.181	ENSOARG00000004585	PNLDC1	100	84.181	Ovis_aries
ENSSBOG00000019135	PNLDC1	100	93.409	ENSPPAG00000026651	PNLDC1	100	93.409	Pan_paniscus
ENSSBOG00000019135	PNLDC1	100	87.006	ENSPPRG00000012854	PNLDC1	100	87.006	Panthera_pardus
ENSSBOG00000019135	PNLDC1	98	82.634	ENSPTIG00000011501	PNLDC1	98	82.634	Panthera_tigris_altaica
ENSSBOG00000019135	PNLDC1	100	93.409	ENSPTRG00000018762	PNLDC1	100	93.409	Pan_troglodytes
ENSSBOG00000019135	PNLDC1	100	93.785	ENSPANG00000022009	PNLDC1	100	93.785	Papio_anubis
ENSSBOG00000019135	PNLDC1	61	55.692	ENSPSIG00000011419	PNLDC1	99	55.692	Pelodiscus_sinensis
ENSSBOG00000019135	PNLDC1	100	86.252	ENSPEMG00000016301	Pnldc1	99	86.252	Peromyscus_maniculatus_bairdii
ENSSBOG00000019135	PNLDC1	83	76.310	ENSPCIG00000023412	PNLDC1	100	76.310	Phascolarctos_cinereus
ENSSBOG00000019135	PNLDC1	100	87.594	ENSPPYG00000017148	PNLDC1	100	87.594	Pongo_abelii
ENSSBOG00000019135	PNLDC1	99	76.894	ENSPCAG00000014169	PNLDC1	99	76.894	Procavia_capensis
ENSSBOG00000019135	PNLDC1	100	89.077	ENSPCOG00000025722	PNLDC1	100	89.077	Propithecus_coquereli
ENSSBOG00000019135	PNLDC1	73	89.351	ENSPVAG00000005325	PNLDC1	73	89.351	Pteropus_vampyrus
ENSSBOG00000019135	PNLDC1	100	85.499	ENSRNOG00000023140	Pnldc1	100	85.499	Rattus_norvegicus
ENSSBOG00000019135	PNLDC1	100	93.597	ENSRBIG00000033806	PNLDC1	100	93.597	Rhinopithecus_bieti
ENSSBOG00000019135	PNLDC1	95	94.071	ENSRROG00000043919	PNLDC1	97	94.071	Rhinopithecus_roxellana
ENSSBOG00000019135	PNLDC1	95	76.436	ENSSHAG00000015192	PNLDC1	97	76.436	Sarcophilus_harrisii
ENSSBOG00000019135	PNLDC1	54	65.052	ENSSPUG00000004627	PNLDC1	99	64.732	Sphenodon_punctatus
ENSSBOG00000019135	PNLDC1	95	85.207	ENSSSCG00000004046	PNLDC1	99	85.207	Sus_scrofa
ENSSBOG00000019135	PNLDC1	91	58.144	ENSTGUG00000011418	PNLDC1	99	58.144	Taeniopygia_guttata
ENSSBOG00000019135	PNLDC1	95	77.318	ENSTBEG00000009131	PNLDC1	98	77.318	Tupaia_belangeri
ENSSBOG00000019135	PNLDC1	73	81.865	ENSTTRG00000010409	PNLDC1	73	81.865	Tursiops_truncatus
ENSSBOG00000019135	PNLDC1	99	74.074	ENSUAMG00000015783	PNLDC1	99	74.074	Ursus_americanus
ENSSBOG00000019135	PNLDC1	95	80.000	ENSUMAG00000011903	PNLDC1	99	80.000	Ursus_maritimus
ENSSBOG00000019135	PNLDC1	96	88.258	ENSVVUG00000006586	PNLDC1	99	87.680	Vulpes_vulpes