EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000019378 (Gene tree)
Gene ID: 101052302
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 38421 bases
Position: chrJH378227.1:2229693-2268113
Accession: 7658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000005527	MIF4G_like	PF09088.11	2.3e-36	1	1
ENSSBOP00000005558	MIF4G_like	PF09088.11	4.4e-26	1	1
ENSSBOP00000005570	MIF4G_like	PF09088.11	3.2e-25	1	1
ENSSBOP00000005561	MIF4G_like	PF09088.11	7.1e-11	1	1
ENSSBOP00000005527	MIF4G_like_2	PF09090.11	1.6e-85	1	1
ENSSBOP00000005570	MIF4G_like_2	PF09090.11	1.7e-85	1	1
ENSSBOP00000005558	MIF4G_like_2	PF09090.11	2.1e-85	1	1
ENSSBOP00000005561	MIF4G	PF02854.19	2.9e-31	1	1
ENSSBOP00000005558	MIF4G	PF02854.19	4e-31	1	1
ENSSBOP00000005527	MIF4G	PF02854.19	9.5e-31	1	1
ENSSBOP00000005570	MIF4G	PF02854.19	4.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000022176	NCBP1-201	3467	XM_003940066	ENSSBOP00000005527	790 (aa)	XP_003940115	A0A2K6SDS6
ENSSBOT00000022223	NCBP1-205	2130	-	ENSSBOP00000005570	709 (aa)	-	A0A2K6SDU8
ENSSBOT00000022213	NCBP1-204	1257	-	ENSSBOP00000005561	418 (aa)	-	A0A2K6SDV2
ENSSBOT00000022194	NCBP1-202	249	-	ENSSBOP00000005544	82 (aa)	-	A0A2K6SDT4
ENSSBOT00000022208	NCBP1-203	2343	-	ENSSBOP00000005558	780 (aa)	-	A0A2K6SDV8

Gene Model

Click here to download ENSSBOG00000019378's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03013	RNA transport	KEGG
sbq03015	mRNA surveillance pathway	KEGG
sbq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000019378's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000019378	NCBP1	100	99.873	ENSG00000136937	NCBP1	100	99.873	Homo_sapiens
ENSSBOG00000019378	NCBP1	98	88.293	ENSAPOG00000008002	NCBP1	99	82.997	Acanthochromis_polyacanthus
ENSSBOG00000019378	NCBP1	100	99.369	ENSAMEG00000004763	NCBP1	100	99.369	Ailuropoda_melanoleuca
ENSSBOG00000019378	NCBP1	98	88.049	ENSACIG00000000274	NCBP1	99	83.354	Amphilophus_citrinellus
ENSSBOG00000019378	NCBP1	98	88.049	ENSAOCG00000021148	NCBP1	99	83.123	Amphiprion_ocellaris
ENSSBOG00000019378	NCBP1	98	88.049	ENSAPEG00000001701	NCBP1	99	83.123	Amphiprion_percula
ENSSBOG00000019378	NCBP1	98	87.317	ENSATEG00000006929	NCBP1	99	82.746	Anabas_testudineus
ENSSBOG00000019378	NCBP1	99	87.225	ENSAPLG00000016318	NCBP1	100	90.753	Anas_platyrhynchos
ENSSBOG00000019378	NCBP1	100	87.266	ENSACAG00000004409	NCBP1	87	87.141	Anolis_carolinensis
ENSSBOG00000019378	NCBP1	100	96.962	ENSANAG00000025744	NCBP1	99	100.000	Aotus_nancymaae
ENSSBOG00000019378	NCBP1	98	88.049	ENSACLG00000014812	NCBP1	99	82.961	Astatotilapia_calliptera
ENSSBOG00000019378	NCBP1	98	87.073	ENSAMXG00000016364	NCBP1	99	81.281	Astyanax_mexicanus
ENSSBOG00000019378	NCBP1	100	99.241	ENSBTAG00000009732	NCBP1	100	99.241	Bos_taurus
ENSSBOG00000019378	NCBP1	97	40.291	WBGene00018156	ncbp-1	99	34.279	Caenorhabditis_elegans
ENSSBOG00000019378	NCBP1	100	99.873	ENSCJAG00000010840	NCBP1	100	100.000	Callithrix_jacchus
ENSSBOG00000019378	NCBP1	100	99.747	ENSCAFG00000002445	NCBP1	100	99.747	Canis_familiaris
ENSSBOG00000019378	NCBP1	99	98.859	ENSCAFG00020017997	NCBP1	100	99.707	Canis_lupus_dingo
ENSSBOG00000019378	NCBP1	100	98.987	ENSCHIG00000020139	NCBP1	100	98.987	Capra_hircus
ENSSBOG00000019378	NCBP1	98	97.816	ENSTSYG00000011914	NCBP1	98	100.000	Carlito_syrichta
ENSSBOG00000019378	NCBP1	88	88.394	ENSCAPG00000014252	NCBP1	90	89.375	Cavia_aperea
ENSSBOG00000019378	NCBP1	99	96.374	ENSCPOG00000012573	NCBP1	99	97.784	Cavia_porcellus
ENSSBOG00000019378	NCBP1	100	100.000	ENSCCAG00000032297	NCBP1	100	100.000	Cebus_capucinus
ENSSBOG00000019378	NCBP1	100	99.873	ENSCATG00000010052	NCBP1	100	99.873	Cercocebus_atys
ENSSBOG00000019378	NCBP1	100	99.747	ENSCLAG00000014339	NCBP1	100	99.747	Chinchilla_lanigera
ENSSBOG00000019378	NCBP1	100	99.873	ENSCSAG00000010929	NCBP1	100	99.873	Chlorocebus_sabaeus
ENSSBOG00000019378	NCBP1	91	97.458	ENSCHOG00000010332	NCBP1	91	97.458	Choloepus_hoffmanni
ENSSBOG00000019378	NCBP1	96	93.035	ENSCPBG00000024344	NCBP1	99	90.694	Chrysemys_picta_bellii
ENSSBOG00000019378	NCBP1	98	56.763	ENSCING00000008990	-	99	54.362	Ciona_intestinalis
ENSSBOG00000019378	NCBP1	99	53.450	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSSBOG00000019378	NCBP1	100	99.873	ENSCANG00000036913	NCBP1	100	99.873	Colobus_angolensis_palliatus
ENSSBOG00000019378	NCBP1	100	98.481	ENSCGRG00001015771	Ncbp1	100	98.481	Cricetulus_griseus_chok1gshd
ENSSBOG00000019378	NCBP1	99	98.590	ENSCGRG00000010311	Ncbp1	100	98.590	Cricetulus_griseus_crigri
ENSSBOG00000019378	NCBP1	98	87.317	ENSCSEG00000012377	NCBP1	99	83.077	Cynoglossus_semilaevis
ENSSBOG00000019378	NCBP1	96	87.531	ENSCVAG00000008795	NCBP1	99	81.509	Cyprinodon_variegatus
ENSSBOG00000019378	NCBP1	100	98.481	ENSDNOG00000006885	NCBP1	100	98.481	Dasypus_novemcinctus
ENSSBOG00000019378	NCBP1	99	95.531	ENSDORG00000013652	Ncbp1	100	94.207	Dipodomys_ordii
ENSSBOG00000019378	NCBP1	94	31.863	FBgn0038887	CG7907	87	33.871	Drosophila_melanogaster
ENSSBOG00000019378	NCBP1	97	60.837	FBgn0022942	Cbp80	100	57.875	Drosophila_melanogaster
ENSSBOG00000019378	NCBP1	89	93.886	ENSETEG00000009705	NCBP1	89	93.886	Echinops_telfairi
ENSSBOG00000019378	NCBP1	98	76.829	ENSEBUG00000008386	NCBP1	100	73.459	Eptatretus_burgeri
ENSSBOG00000019378	NCBP1	100	99.241	ENSEASG00005022795	NCBP1	100	99.241	Equus_asinus_asinus
ENSSBOG00000019378	NCBP1	100	99.367	ENSECAG00000013847	NCBP1	100	99.367	Equus_caballus
ENSSBOG00000019378	NCBP1	95	94.024	ENSEEUG00000015973	NCBP1	99	93.625	Erinaceus_europaeus
ENSSBOG00000019378	NCBP1	96	87.811	ENSELUG00000022519	NCBP1	99	81.635	Esox_lucius
ENSSBOG00000019378	NCBP1	100	99.620	ENSFCAG00000001206	NCBP1	100	99.620	Felis_catus
ENSSBOG00000019378	NCBP1	98	91.443	ENSFALG00000001193	NCBP1	100	89.567	Ficedula_albicollis
ENSSBOG00000019378	NCBP1	100	99.494	ENSFDAG00000010864	NCBP1	100	99.494	Fukomys_damarensis
ENSSBOG00000019378	NCBP1	98	86.829	ENSFHEG00000000655	NCBP1	99	81.887	Fundulus_heteroclitus
ENSSBOG00000019378	NCBP1	98	85.610	ENSGMOG00000008653	NCBP1	99	79.623	Gadus_morhua
ENSSBOG00000019378	NCBP1	98	91.687	ENSGALG00000002087	NCBP1	100	90.290	Gallus_gallus
ENSSBOG00000019378	NCBP1	98	87.561	ENSGAFG00000017787	NCBP1	99	82.763	Gambusia_affinis
ENSSBOG00000019378	NCBP1	98	86.829	ENSGACG00000016772	NCBP1	98	81.807	Gasterosteus_aculeatus
ENSSBOG00000019378	NCBP1	100	88.805	ENSGAGG00000019483	NCBP1	99	90.417	Gopherus_agassizii
ENSSBOG00000019378	NCBP1	100	99.873	ENSGGOG00000001376	NCBP1	100	99.873	Gorilla_gorilla
ENSSBOG00000019378	NCBP1	98	88.049	ENSHBUG00000020843	NCBP1	99	82.746	Haplochromis_burtoni
ENSSBOG00000019378	NCBP1	100	86.742	ENSHGLG00000018112	-	100	86.742	Heterocephalus_glaber_female
ENSSBOG00000019378	NCBP1	100	99.620	ENSHGLG00000001882	NCBP1	100	99.620	Heterocephalus_glaber_female
ENSSBOG00000019378	NCBP1	100	99.620	ENSHGLG00100013014	NCBP1	100	99.620	Heterocephalus_glaber_male
ENSSBOG00000019378	NCBP1	100	86.490	ENSHGLG00100017373	-	100	86.490	Heterocephalus_glaber_male
ENSSBOG00000019378	NCBP1	86	69.048	ENSHCOG00000000204	NCBP1	92	72.222	Hippocampus_comes
ENSSBOG00000019378	NCBP1	98	86.098	ENSIPUG00000007275	ncbp1	99	81.887	Ictalurus_punctatus
ENSSBOG00000019378	NCBP1	100	99.494	ENSSTOG00000002695	NCBP1	100	99.494	Ictidomys_tridecemlineatus
ENSSBOG00000019378	NCBP1	98	86.585	ENSKMAG00000003594	NCBP1	99	86.179	Kryptolebias_marmoratus
ENSSBOG00000019378	NCBP1	96	87.282	ENSLBEG00000011661	NCBP1	99	80.745	Labrus_bergylta
ENSSBOG00000019378	NCBP1	98	89.078	ENSLACG00000013955	NCBP1	100	79.851	Latimeria_chalumnae
ENSSBOG00000019378	NCBP1	99	72.319	ENSLOCG00000009579	NCBP1	99	72.319	Lepisosteus_oculatus
ENSSBOG00000019378	NCBP1	100	98.987	ENSLAFG00000005999	NCBP1	100	98.987	Loxodonta_africana
ENSSBOG00000019378	NCBP1	100	99.873	ENSMFAG00000030994	NCBP1	100	99.873	Macaca_fascicularis
ENSSBOG00000019378	NCBP1	99	99.872	ENSMMUG00000012281	NCBP1	99	99.872	Macaca_mulatta
ENSSBOG00000019378	NCBP1	100	99.873	ENSMNEG00000042790	NCBP1	100	99.873	Macaca_nemestrina
ENSSBOG00000019378	NCBP1	100	99.873	ENSMLEG00000030374	NCBP1	100	99.873	Mandrillus_leucophaeus
ENSSBOG00000019378	NCBP1	96	88.060	ENSMAMG00000014806	NCBP1	99	82.872	Mastacembelus_armatus
ENSSBOG00000019378	NCBP1	94	89.031	ENSMZEG00005009290	-	99	82.682	Maylandia_zebra
ENSSBOG00000019378	NCBP1	98	88.049	ENSMZEG00005003469	NCBP1	99	82.746	Maylandia_zebra
ENSSBOG00000019378	NCBP1	99	97.837	ENSMAUG00000020583	Ncbp1	99	97.837	Mesocricetus_auratus
ENSSBOG00000019378	NCBP1	100	99.494	ENSMICG00000012682	NCBP1	100	99.494	Microcebus_murinus
ENSSBOG00000019378	NCBP1	100	98.101	ENSMOCG00000015818	Ncbp1	100	98.101	Microtus_ochrogaster
ENSSBOG00000019378	NCBP1	99	79.832	ENSMMOG00000002610	NCBP1	99	82.238	Mola_mola
ENSSBOG00000019378	NCBP1	100	93.924	ENSMODG00000003202	NCBP1	99	93.671	Monodelphis_domestica
ENSSBOG00000019378	NCBP1	98	87.561	ENSMALG00000003547	NCBP1	99	81.990	Monopterus_albus
ENSSBOG00000019378	NCBP1	100	98.101	MGP_CAROLIEiJ_G0025982	Ncbp1	100	98.101	Mus_caroli
ENSSBOG00000019378	NCBP1	100	98.101	ENSMUSG00000028330	Ncbp1	100	98.101	Mus_musculus
ENSSBOG00000019378	NCBP1	100	98.354	MGP_PahariEiJ_G0028318	Ncbp1	100	98.354	Mus_pahari
ENSSBOG00000019378	NCBP1	100	98.101	MGP_SPRETEiJ_G0026945	Ncbp1	100	98.101	Mus_spretus
ENSSBOG00000019378	NCBP1	100	99.620	ENSMPUG00000006399	NCBP1	100	99.620	Mustela_putorius_furo
ENSSBOG00000019378	NCBP1	99	98.203	ENSMLUG00000015201	NCBP1	100	98.203	Myotis_lucifugus
ENSSBOG00000019378	NCBP1	100	98.354	ENSNGAG00000014101	Ncbp1	100	98.354	Nannospalax_galili
ENSSBOG00000019378	NCBP1	76	86.784	ENSNBRG00000014674	NCBP1	97	86.784	Neolamprologus_brichardi
ENSSBOG00000019378	NCBP1	100	99.873	ENSNLEG00000016909	NCBP1	100	99.873	Nomascus_leucogenys
ENSSBOG00000019378	NCBP1	89	95.045	ENSMEUG00000010672	NCBP1	90	92.793	Notamacropus_eugenii
ENSSBOG00000019378	NCBP1	79	100.000	ENSOPRG00000002144	-	83	100.000	Ochotona_princeps
ENSSBOG00000019378	NCBP1	100	99.494	ENSODEG00000003232	NCBP1	100	99.494	Octodon_degus
ENSSBOG00000019378	NCBP1	96	89.303	ENSONIG00000001502	NCBP1	99	82.746	Oreochromis_niloticus
ENSSBOG00000019378	NCBP1	98	93.659	ENSOANG00000001918	NCBP1	100	95.666	Ornithorhynchus_anatinus
ENSSBOG00000019378	NCBP1	98	98.715	ENSOCUG00000013853	NCBP1	97	98.715	Oryctolagus_cuniculus
ENSSBOG00000019378	NCBP1	96	87.811	ENSORLG00000011008	NCBP1	99	80.827	Oryzias_latipes
ENSSBOG00000019378	NCBP1	96	87.811	ENSORLG00020017455	NCBP1	99	80.827	Oryzias_latipes_hni
ENSSBOG00000019378	NCBP1	96	87.811	ENSORLG00015012127	NCBP1	99	80.952	Oryzias_latipes_hsok
ENSSBOG00000019378	NCBP1	97	87.871	ENSOMEG00000020698	NCBP1	99	81.704	Oryzias_melastigma
ENSSBOG00000019378	NCBP1	100	99.621	ENSOGAG00000013888	NCBP1	100	99.621	Otolemur_garnettii
ENSSBOG00000019378	NCBP1	100	98.987	ENSOARG00000011233	NCBP1	100	98.987	Ovis_aries
ENSSBOG00000019378	NCBP1	100	99.873	ENSPPAG00000026462	NCBP1	100	99.873	Pan_paniscus
ENSSBOG00000019378	NCBP1	100	99.747	ENSPPRG00000022574	NCBP1	100	99.747	Panthera_pardus
ENSSBOG00000019378	NCBP1	100	99.747	ENSPTIG00000018507	NCBP1	100	99.747	Panthera_tigris_altaica
ENSSBOG00000019378	NCBP1	100	99.873	ENSPTRG00000021167	NCBP1	100	99.873	Pan_troglodytes
ENSSBOG00000019378	NCBP1	100	99.873	ENSPANG00000025591	NCBP1	100	99.873	Papio_anubis
ENSSBOG00000019378	NCBP1	98	86.585	ENSPKIG00000015861	NCBP1	100	81.006	Paramormyrops_kingsleyae
ENSSBOG00000019378	NCBP1	70	85.547	ENSPSIG00000009558	NCBP1	100	89.648	Pelodiscus_sinensis
ENSSBOG00000019378	NCBP1	98	81.356	ENSPMGG00000020476	NCBP1	99	79.219	Periophthalmus_magnuspinnatus
ENSSBOG00000019378	NCBP1	100	97.975	ENSPEMG00000020105	Ncbp1	100	97.975	Peromyscus_maniculatus_bairdii
ENSSBOG00000019378	NCBP1	98	78.293	ENSPMAG00000005533	NCBP1	100	67.746	Petromyzon_marinus
ENSSBOG00000019378	NCBP1	100	93.671	ENSPCIG00000015800	NCBP1	99	94.715	Phascolarctos_cinereus
ENSSBOG00000019378	NCBP1	98	87.073	ENSPFOG00000004158	NCBP1	99	81.704	Poecilia_formosa
ENSSBOG00000019378	NCBP1	98	86.829	ENSPLAG00000020002	NCBP1	99	82.138	Poecilia_latipinna
ENSSBOG00000019378	NCBP1	98	87.073	ENSPMEG00000019821	NCBP1	99	82.138	Poecilia_mexicana
ENSSBOG00000019378	NCBP1	98	86.829	ENSPREG00000006035	NCBP1	99	82.035	Poecilia_reticulata
ENSSBOG00000019378	NCBP1	100	99.873	ENSPPYG00000019426	NCBP1	100	99.873	Pongo_abelii
ENSSBOG00000019378	NCBP1	89	99.219	ENSPCAG00000009943	NCBP1	85	99.310	Procavia_capensis
ENSSBOG00000019378	NCBP1	89	98.065	ENSPCOG00000020024	NCBP1	98	99.390	Propithecus_coquereli
ENSSBOG00000019378	NCBP1	100	99.114	ENSPVAG00000005924	NCBP1	100	99.114	Pteropus_vampyrus
ENSSBOG00000019378	NCBP1	99	80.168	ENSPNYG00000002140	NCBP1	99	82.961	Pundamilia_nyererei
ENSSBOG00000019378	NCBP1	96	87.313	ENSPNAG00000027753	NCBP1	99	82.035	Pygocentrus_nattereri
ENSSBOG00000019378	NCBP1	100	98.228	ENSRNOG00000023605	Ncbp1	100	98.228	Rattus_norvegicus
ENSSBOG00000019378	NCBP1	100	99.873	ENSRBIG00000043175	NCBP1	100	99.873	Rhinopithecus_bieti
ENSSBOG00000019378	NCBP1	100	99.873	ENSRROG00000029767	NCBP1	100	99.873	Rhinopithecus_roxellana
ENSSBOG00000019378	NCBP1	69	95.720	ENSSHAG00000015882	NCBP1	73	95.720	Sarcophilus_harrisii
ENSSBOG00000019378	NCBP1	96	86.070	ENSSFOG00015001872	NCBP1	100	80.633	Scleropages_formosus
ENSSBOG00000019378	NCBP1	98	86.585	ENSSMAG00000007463	NCBP1	99	81.612	Scophthalmus_maximus
ENSSBOG00000019378	NCBP1	98	87.805	ENSSDUG00000007019	NCBP1	100	82.853	Seriola_dumerili
ENSSBOG00000019378	NCBP1	98	87.805	ENSSLDG00000021924	NCBP1	99	82.620	Seriola_lalandi_dorsalis
ENSSBOG00000019378	NCBP1	85	91.048	ENSSARG00000007274	NCBP1	87	91.048	Sorex_araneus
ENSSBOG00000019378	NCBP1	100	82.152	ENSSPUG00000008609	NCBP1	100	82.152	Sphenodon_punctatus
ENSSBOG00000019378	NCBP1	98	88.049	ENSSPAG00000012550	NCBP1	99	83.123	Stegastes_partitus
ENSSBOG00000019378	NCBP1	100	99.620	ENSSSCG00000005366	NCBP1	100	99.620	Sus_scrofa
ENSSBOG00000019378	NCBP1	100	83.899	ENSTGUG00000001472	NCBP1	100	84.025	Taeniopygia_guttata
ENSSBOG00000019378	NCBP1	98	86.829	ENSTRUG00000005287	NCBP1	99	81.612	Takifugu_rubripes
ENSSBOG00000019378	NCBP1	98	98.537	ENSTBEG00000004035	NCBP1	100	96.076	Tupaia_belangeri
ENSSBOG00000019378	NCBP1	88	99.593	ENSTTRG00000000507	NCBP1	88	99.593	Tursiops_truncatus
ENSSBOG00000019378	NCBP1	100	99.620	ENSUAMG00000005471	NCBP1	100	99.620	Ursus_americanus
ENSSBOG00000019378	NCBP1	100	96.552	ENSUMAG00000011865	NCBP1	100	99.707	Ursus_maritimus
ENSSBOG00000019378	NCBP1	99	96.643	ENSVPAG00000010537	NCBP1	100	95.316	Vicugna_pacos
ENSSBOG00000019378	NCBP1	100	99.747	ENSVVUG00000019725	NCBP1	100	99.747	Vulpes_vulpes
ENSSBOG00000019378	NCBP1	100	81.416	ENSXETG00000010179	ncbp1	100	81.416	Xenopus_tropicalis
ENSSBOG00000019378	NCBP1	98	87.073	ENSXMAG00000018253	NCBP1	99	82.264	Xiphophorus_maculatus