EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000019486 (Gene tree)
Gene ID: 101036949
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 22007 bases
Position: chrJH378127.1:18529537-18551543
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000005314	zf-U11-48K	PF05253.12	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000021932	SNRNP48-201	3044	XM_003927369	ENSSBOP00000005314	339 (aa)	XP_003927418	A0A2K6SD57

Gene Model

Click here to download ENSSBOG00000019486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000019486's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000019486	SNRNP48	100	98.230	ENSG00000168566	SNRNP48	100	98.230	Homo_sapiens
ENSSBOG00000019486	SNRNP48	81	48.057	ENSAPOG00000021430	snrnp48	83	47.751	Acanthochromis_polyacanthus
ENSSBOG00000019486	SNRNP48	99	88.761	ENSAMEG00000017349	SNRNP48	100	87.608	Ailuropoda_melanoleuca
ENSSBOG00000019486	SNRNP48	83	46.290	ENSACIG00000002032	snrnp48	82	46.290	Amphilophus_citrinellus
ENSSBOG00000019486	SNRNP48	81	48.057	ENSAOCG00000010562	snrnp48	96	42.939	Amphiprion_ocellaris
ENSSBOG00000019486	SNRNP48	81	48.399	ENSAPEG00000003231	snrnp48	96	43.188	Amphiprion_percula
ENSSBOG00000019486	SNRNP48	77	50.735	ENSATEG00000020210	snrnp48	81	50.357	Anabas_testudineus
ENSSBOG00000019486	SNRNP48	83	65.068	ENSACAG00000002811	SNRNP48	89	64.828	Anolis_carolinensis
ENSSBOG00000019486	SNRNP48	100	99.410	ENSANAG00000033538	SNRNP48	100	99.410	Aotus_nancymaae
ENSSBOG00000019486	SNRNP48	94	45.679	ENSAMXG00000015309	snrnp48	85	48.084	Astyanax_mexicanus
ENSSBOG00000019486	SNRNP48	100	85.882	ENSBTAG00000001123	SNRNP48	100	86.176	Bos_taurus
ENSSBOG00000019486	SNRNP48	100	98.820	ENSCJAG00000021330	SNRNP48	100	98.820	Callithrix_jacchus
ENSSBOG00000019486	SNRNP48	99	91.071	ENSCAFG00000009574	SNRNP48	83	91.098	Canis_familiaris
ENSSBOG00000019486	SNRNP48	99	91.395	ENSCAFG00020013203	SNRNP48	99	91.395	Canis_lupus_dingo
ENSSBOG00000019486	SNRNP48	100	87.353	ENSCHIG00000015216	SNRNP48	100	87.647	Capra_hircus
ENSSBOG00000019486	SNRNP48	100	92.920	ENSTSYG00000000698	SNRNP48	100	92.920	Carlito_syrichta
ENSSBOG00000019486	SNRNP48	91	87.013	ENSCAPG00000006768	SNRNP48	100	86.688	Cavia_aperea
ENSSBOG00000019486	SNRNP48	100	90.265	ENSCPOG00000007910	SNRNP48	100	90.265	Cavia_porcellus
ENSSBOG00000019486	SNRNP48	100	98.525	ENSCCAG00000035652	SNRNP48	100	98.525	Cebus_capucinus
ENSSBOG00000019486	SNRNP48	100	97.640	ENSCATG00000033947	SNRNP48	100	97.640	Cercocebus_atys
ENSSBOG00000019486	SNRNP48	100	90.560	ENSCLAG00000003765	SNRNP48	100	90.560	Chinchilla_lanigera
ENSSBOG00000019486	SNRNP48	100	98.230	ENSCSAG00000007409	SNRNP48	100	98.230	Chlorocebus_sabaeus
ENSSBOG00000019486	SNRNP48	85	63.487	ENSCPBG00000019146	SNRNP48	90	64.310	Chrysemys_picta_bellii
ENSSBOG00000019486	SNRNP48	94	30.341	ENSCING00000004121	-	61	35.468	Ciona_intestinalis
ENSSBOG00000019486	SNRNP48	100	98.230	ENSCANG00000030017	SNRNP48	100	98.230	Colobus_angolensis_palliatus
ENSSBOG00000019486	SNRNP48	100	88.496	ENSCGRG00001001076	-	100	87.611	Cricetulus_griseus_chok1gshd
ENSSBOG00000019486	SNRNP48	99	69.552	ENSCGRG00001008805	-	95	68.955	Cricetulus_griseus_chok1gshd
ENSSBOG00000019486	SNRNP48	100	88.496	ENSCGRG00000007781	Snrnp48	100	87.611	Cricetulus_griseus_crigri
ENSSBOG00000019486	SNRNP48	76	50.192	ENSCSEG00000000722	snrnp48	72	50.192	Cynoglossus_semilaevis
ENSSBOG00000019486	SNRNP48	89	46.645	ENSCVAG00000019829	snrnp48	73	47.569	Cyprinodon_variegatus
ENSSBOG00000019486	SNRNP48	81	47.203	ENSDARG00000039989	snrnp48	83	45.890	Danio_rerio
ENSSBOG00000019486	SNRNP48	100	90.588	ENSDNOG00000014978	SNRNP48	100	90.588	Dasypus_novemcinctus
ENSSBOG00000019486	SNRNP48	99	88.791	ENSDORG00000015140	Snrnp48	99	88.201	Dipodomys_ordii
ENSSBOG00000019486	SNRNP48	99	92.012	ENSEASG00005012021	SNRNP48	99	92.012	Equus_asinus_asinus
ENSSBOG00000019486	SNRNP48	100	92.625	ENSECAG00000026937	SNRNP48	100	92.625	Equus_caballus
ENSSBOG00000019486	SNRNP48	100	70.588	ENSEEUG00000015437	SNRNP48	99	70.294	Erinaceus_europaeus
ENSSBOG00000019486	SNRNP48	87	47.351	ENSELUG00000009766	snrnp48	77	48.571	Esox_lucius
ENSSBOG00000019486	SNRNP48	100	93.215	ENSFCAG00000018853	SNRNP48	100	93.215	Felis_catus
ENSSBOG00000019486	SNRNP48	83	66.438	ENSFALG00000007797	SNRNP48	92	66.436	Ficedula_albicollis
ENSSBOG00000019486	SNRNP48	99	89.941	ENSFDAG00000009231	SNRNP48	100	89.676	Fukomys_damarensis
ENSSBOG00000019486	SNRNP48	59	57.426	ENSFHEG00000014647	snrnp48	97	46.801	Fundulus_heteroclitus
ENSSBOG00000019486	SNRNP48	73	47.984	ENSGMOG00000018599	-	86	45.936	Gadus_morhua
ENSSBOG00000019486	SNRNP48	78	67.148	ENSGALG00000013005	SNRNP48	82	68.571	Gallus_gallus
ENSSBOG00000019486	SNRNP48	82	48.944	ENSGAFG00000021639	snrnp48	81	44.411	Gambusia_affinis
ENSSBOG00000019486	SNRNP48	71	52.066	ENSGACG00000017756	-	84	48.780	Gasterosteus_aculeatus
ENSSBOG00000019486	SNRNP48	84	62.252	ENSGAGG00000000865	SNRNP48	96	62.963	Gopherus_agassizii
ENSSBOG00000019486	SNRNP48	100	98.230	ENSGGOG00000013220	SNRNP48	100	98.230	Gorilla_gorilla
ENSSBOG00000019486	SNRNP48	76	48.276	ENSHBUG00000017066	snrnp48	83	46.259	Haplochromis_burtoni
ENSSBOG00000019486	SNRNP48	99	91.124	ENSHGLG00000015241	SNRNP48	100	90.855	Heterocephalus_glaber_female
ENSSBOG00000019486	SNRNP48	99	91.124	ENSHGLG00100010027	SNRNP48	100	90.855	Heterocephalus_glaber_male
ENSSBOG00000019486	SNRNP48	72	47.967	ENSHCOG00000014066	snrnp48	81	45.833	Hippocampus_comes
ENSSBOG00000019486	SNRNP48	100	93.805	ENSSTOG00000014635	SNRNP48	100	96.000	Ictidomys_tridecemlineatus
ENSSBOG00000019486	SNRNP48	100	85.546	ENSJJAG00000011495	Snrnp48	100	85.546	Jaculus_jaculus
ENSSBOG00000019486	SNRNP48	90	44.951	ENSKMAG00000016514	snrnp48	80	47.331	Kryptolebias_marmoratus
ENSSBOG00000019486	SNRNP48	76	49.807	ENSLBEG00000026249	snrnp48	95	42.733	Labrus_bergylta
ENSSBOG00000019486	SNRNP48	96	54.491	ENSLACG00000003958	SNRNP48	98	53.061	Latimeria_chalumnae
ENSSBOG00000019486	SNRNP48	83	51.211	ENSLOCG00000004187	snrnp48	95	48.665	Lepisosteus_oculatus
ENSSBOG00000019486	SNRNP48	100	88.791	ENSLAFG00000011152	SNRNP48	100	88.791	Loxodonta_africana
ENSSBOG00000019486	SNRNP48	100	98.525	ENSMFAG00000045216	SNRNP48	100	98.525	Macaca_fascicularis
ENSSBOG00000019486	SNRNP48	100	98.525	ENSMMUG00000014785	SNRNP48	100	98.525	Macaca_mulatta
ENSSBOG00000019486	SNRNP48	100	98.525	ENSMNEG00000042269	SNRNP48	100	98.525	Macaca_nemestrina
ENSSBOG00000019486	SNRNP48	100	98.525	ENSMLEG00000034004	SNRNP48	100	98.525	Mandrillus_leucophaeus
ENSSBOG00000019486	SNRNP48	76	48.289	ENSMAMG00000018673	snrnp48	71	48.387	Mastacembelus_armatus
ENSSBOG00000019486	SNRNP48	83	65.986	ENSMGAG00000006037	SNRNP48	99	65.753	Meleagris_gallopavo
ENSSBOG00000019486	SNRNP48	100	89.086	ENSMAUG00000011944	Snrnp48	100	88.201	Mesocricetus_auratus
ENSSBOG00000019486	SNRNP48	100	92.035	ENSMICG00000012497	SNRNP48	100	92.035	Microcebus_murinus
ENSSBOG00000019486	SNRNP48	100	88.791	ENSMOCG00000015555	Snrnp48	100	87.906	Microtus_ochrogaster
ENSSBOG00000019486	SNRNP48	54	53.514	ENSMMOG00000003072	-	58	53.514	Mola_mola
ENSSBOG00000019486	SNRNP48	98	70.058	ENSMODG00000009996	SNRNP48	93	70.058	Monodelphis_domestica
ENSSBOG00000019486	SNRNP48	74	50.394	ENSMALG00000005725	snrnp48	80	47.331	Monopterus_albus
ENSSBOG00000019486	SNRNP48	100	87.906	MGP_CAROLIEiJ_G0018441	Snrnp48	100	87.021	Mus_caroli
ENSSBOG00000019486	SNRNP48	100	87.021	ENSMUSG00000021431	Snrnp48	100	86.136	Mus_musculus
ENSSBOG00000019486	SNRNP48	100	87.316	MGP_PahariEiJ_G0019509	Snrnp48	100	86.431	Mus_pahari
ENSSBOG00000019486	SNRNP48	100	86.431	MGP_SPRETEiJ_G0019321	Snrnp48	100	85.546	Mus_spretus
ENSSBOG00000019486	SNRNP48	99	87.870	ENSNGAG00000004849	Snrnp48	99	87.870	Nannospalax_galili
ENSSBOG00000019486	SNRNP48	76	47.893	ENSNBRG00000012127	snrnp48	84	45.918	Neolamprologus_brichardi
ENSSBOG00000019486	SNRNP48	100	98.525	ENSNLEG00000011667	SNRNP48	100	98.525	Nomascus_leucogenys
ENSSBOG00000019486	SNRNP48	95	78.328	ENSOPRG00000015471	SNRNP48	100	78.328	Ochotona_princeps
ENSSBOG00000019486	SNRNP48	74	48.438	ENSONIG00000001520	snrnp48	82	46.367	Oreochromis_niloticus
ENSSBOG00000019486	SNRNP48	57	62.500	ENSOANG00000019888	-	100	63.462	Ornithorhynchus_anatinus
ENSSBOG00000019486	SNRNP48	84	90.909	ENSOCUG00000005168	SNRNP48	100	90.461	Oryctolagus_cuniculus
ENSSBOG00000019486	SNRNP48	88	47.403	ENSORLG00000015654	snrnp48	82	47.931	Oryzias_latipes
ENSSBOG00000019486	SNRNP48	88	46.429	ENSORLG00020015976	snrnp48	70	47.241	Oryzias_latipes_hni
ENSSBOG00000019486	SNRNP48	88	47.403	ENSORLG00015022379	snrnp48	71	48.276	Oryzias_latipes_hsok
ENSSBOG00000019486	SNRNP48	83	47.917	ENSOMEG00000022007	snrnp48	82	48.611	Oryzias_melastigma
ENSSBOG00000019486	SNRNP48	92	91.961	ENSOGAG00000005275	SNRNP48	96	92.114	Otolemur_garnettii
ENSSBOG00000019486	SNRNP48	85	87.108	ENSOARG00000017319	SNRNP48	99	87.279	Ovis_aries
ENSSBOG00000019486	SNRNP48	100	98.525	ENSPPAG00000032873	SNRNP48	100	98.525	Pan_paniscus
ENSSBOG00000019486	SNRNP48	100	93.510	ENSPPRG00000004283	SNRNP48	100	93.510	Panthera_pardus
ENSSBOG00000019486	SNRNP48	85	93.728	ENSPTIG00000013502	SNRNP48	99	93.993	Panthera_tigris_altaica
ENSSBOG00000019486	SNRNP48	100	98.525	ENSPTRG00000017703	SNRNP48	100	98.525	Pan_troglodytes
ENSSBOG00000019486	SNRNP48	100	98.525	ENSPANG00000000771	SNRNP48	100	98.525	Papio_anubis
ENSSBOG00000019486	SNRNP48	94	46.377	ENSPKIG00000013703	snrnp48	70	45.238	Paramormyrops_kingsleyae
ENSSBOG00000019486	SNRNP48	87	61.935	ENSPSIG00000002213	SNRNP48	92	62.799	Pelodiscus_sinensis
ENSSBOG00000019486	SNRNP48	72	49.388	ENSPMGG00000008120	snrnp48	86	49.388	Periophthalmus_magnuspinnatus
ENSSBOG00000019486	SNRNP48	100	89.676	ENSPEMG00000008872	Snrnp48	100	89.381	Peromyscus_maniculatus_bairdii
ENSSBOG00000019486	SNRNP48	73	52.988	ENSPFOG00000003578	snrnp48	81	46.012	Poecilia_formosa
ENSSBOG00000019486	SNRNP48	67	52.838	ENSPLAG00000002290	snrnp48	77	52.402	Poecilia_latipinna
ENSSBOG00000019486	SNRNP48	73	52.191	ENSPMEG00000018033	snrnp48	81	45.399	Poecilia_mexicana
ENSSBOG00000019486	SNRNP48	72	52.846	ENSPREG00000018541	snrnp48	80	49.645	Poecilia_reticulata
ENSSBOG00000019486	SNRNP48	100	97.050	ENSPPYG00000016209	SNRNP48	100	97.050	Pongo_abelii
ENSSBOG00000019486	SNRNP48	79	71.161	ENSPCAG00000011991	SNRNP48	99	71.161	Procavia_capensis
ENSSBOG00000019486	SNRNP48	100	90.560	ENSPVAG00000002854	SNRNP48	100	90.560	Pteropus_vampyrus
ENSSBOG00000019486	SNRNP48	76	48.659	ENSPNYG00000015399	snrnp48	92	46.599	Pundamilia_nyererei
ENSSBOG00000019486	SNRNP48	100	87.906	ENSRNOG00000013756	Snrnp48	100	87.021	Rattus_norvegicus
ENSSBOG00000019486	SNRNP48	91	97.742	ENSRBIG00000043856	SNRNP48	98	97.742	Rhinopithecus_bieti
ENSSBOG00000019486	SNRNP48	100	98.230	ENSRROG00000043229	SNRNP48	100	98.230	Rhinopithecus_roxellana
ENSSBOG00000019486	SNRNP48	98	70.930	ENSSHAG00000014483	SNRNP48	99	70.930	Sarcophilus_harrisii
ENSSBOG00000019486	SNRNP48	73	52.569	ENSSFOG00015006610	snrnp48	69	50.338	Scleropages_formosus
ENSSBOG00000019486	SNRNP48	87	47.138	ENSSDUG00000014953	snrnp48	96	42.857	Seriola_dumerili
ENSSBOG00000019486	SNRNP48	83	48.475	ENSSLDG00000005989	snrnp48	97	42.655	Seriola_lalandi_dorsalis
ENSSBOG00000019486	SNRNP48	84	64.094	ENSSPUG00000006257	SNRNP48	84	64.505	Sphenodon_punctatus
ENSSBOG00000019486	SNRNP48	78	49.270	ENSSPAG00000006454	snrnp48	80	48.929	Stegastes_partitus
ENSSBOG00000019486	SNRNP48	83	64.605	ENSTGUG00000007575	SNRNP48	92	64.583	Taeniopygia_guttata
ENSSBOG00000019486	SNRNP48	92	43.038	ENSTRUG00000007031	snrnp48	93	44.272	Takifugu_rubripes
ENSSBOG00000019486	SNRNP48	76	46.154	ENSTNIG00000012977	-	72	47.541	Tetraodon_nigroviridis
ENSSBOG00000019486	SNRNP48	100	74.631	ENSTBEG00000015620	SNRNP48	100	74.631	Tupaia_belangeri
ENSSBOG00000019486	SNRNP48	100	90.265	ENSTTRG00000016715	SNRNP48	100	90.265	Tursiops_truncatus
ENSSBOG00000019486	SNRNP48	100	91.740	ENSUAMG00000003690	SNRNP48	100	90.560	Ursus_americanus
ENSSBOG00000019486	SNRNP48	85	86.760	ENSVPAG00000003557	SNRNP48	99	86.572	Vicugna_pacos
ENSSBOG00000019486	SNRNP48	99	91.098	ENSVVUG00000004996	SNRNP48	99	91.098	Vulpes_vulpes
ENSSBOG00000019486	SNRNP48	89	52.548	ENSXETG00000020447	snrnp48	99	49.153	Xenopus_tropicalis
ENSSBOG00000019486	SNRNP48	67	52.174	ENSXCOG00000004478	snrnp48	69	51.915	Xiphophorus_couchianus
ENSSBOG00000019486	SNRNP48	82	50.538	ENSXMAG00000013595	snrnp48	81	45.619	Xiphophorus_maculatus