EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000019696 (Gene tree)
Gene ID: 101047491
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 87956 bases
Position: chrJH378154.1:14355176-14443131
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000006071	GTP_EFTU	PF00009.27	5.2e-47	1	1
ENSSBOP00000006052	GTP_EFTU	PF00009.27	5.8e-47	1	1
ENSSBOP00000006072	GTP_EFTU	PF00009.27	5.9e-47	1	1
ENSSBOP00000006070	GTP_EFTU	PF00009.27	6e-47	1	1
ENSSBOP00000006071	GTP_EFTU_D2	PF03144.25	1.1e-08	1	1
ENSSBOP00000006070	GTP_EFTU_D2	PF03144.25	1.2e-08	1	1
ENSSBOP00000006052	GTP_EFTU_D2	PF03144.25	1.3e-08	1	1
ENSSBOP00000006072	GTP_EFTU_D2	PF03144.25	3.2e-08	1	1
ENSSBOP00000006052	GTP_EFTU_D3	PF03143.17	1.5e-31	1	1
ENSSBOP00000006071	GTP_EFTU_D3	PF03143.17	8.2e-31	1	1
ENSSBOP00000006072	GTP_EFTU_D3	PF03143.17	9.1e-31	1	1
ENSSBOP00000006070	GTP_EFTU_D3	PF03143.17	9.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000022789	-	645	-	ENSSBOP00000006077	214 (aa)	-	A0A2K6SFC8
ENSSBOT00000022761	-	2916	XM_003932461	ENSSBOP00000006052	685 (aa)	XP_003932510	A0A2K6SFA8
ENSSBOT00000022803	-	354	-	ENSSBOP00000006091	117 (aa)	-	A0A2K6SFC4
ENSSBOT00000022783	-	1941	-	ENSSBOP00000006071	646 (aa)	-	A0A2K6SFA7
ENSSBOT00000022782	-	2067	-	ENSSBOP00000006070	688 (aa)	-	A0A2K6SFA6
ENSSBOT00000022798	-	2783	XM_010343023	ENSSBOP00000006086	628 (aa)	XP_010341325	A0A2K6SFC0
ENSSBOT00000022784	-	1872	-	ENSSBOP00000006072	623 (aa)	-	A0A2K6SFC5

Gene Model

Click here to download ENSSBOG00000019696's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03015	mRNA surveillance pathway	KEGG
sbq05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000019696's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000019696	-	100	88.613	ENSSBOG00000016930	-	98	90.957
ENSSBOG00000019696	-	69	42.593	ENSSBOG00000036422	GSPT2	68	42.757
ENSSBOG00000019696	-	66	39.110	ENSSBOG00000021512	EEF1A2	99	39.110
ENSSBOG00000019696	-	61	35.897	ENSSBOG00000022443	-	94	35.623
ENSSBOG00000019696	-	68	35.714	ENSSBOG00000035539	-	94	35.714
ENSSBOG00000019696	-	68	39.401	ENSSBOG00000033014	-	95	39.130
ENSSBOG00000019696	-	68	32.471	ENSSBOG00000027922	-	93	32.243
ENSSBOG00000019696	-	65	38.129	ENSSBOG00000015022	-	98	38.129
ENSSBOG00000019696	-	68	34.180	ENSSBOG00000034943	-	94	33.945
ENSSBOG00000019696	-	68	35.484	ENSSBOG00000034828	-	95	35.240
ENSSBOG00000019696	-	69	43.287	ENSSBOG00000017761	GSPT1	82	43.458
ENSSBOG00000019696	-	65	39.713	ENSSBOG00000031399	-	98	39.713
ENSSBOG00000019696	-	68	36.782	ENSSBOG00000032457	-	95	36.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000019696	-	100	96.204	ENSG00000112339	HBS1L	100	96.545	Homo_sapiens
ENSSBOG00000019696	-	80	86.059	ENSAPOG00000013169	hbs1l	91	86.059	Acanthochromis_polyacanthus
ENSSBOG00000019696	-	99	93.119	ENSAMEG00000009749	HBS1L	99	93.119	Ailuropoda_melanoleuca
ENSSBOG00000019696	-	85	78.908	ENSACIG00000017087	hbs1l	90	78.464	Amphilophus_citrinellus
ENSSBOG00000019696	-	92	83.333	ENSAPEG00000008320	hbs1l	100	71.897	Amphiprion_percula
ENSSBOG00000019696	-	94	83.333	ENSATEG00000004459	hbs1l	100	71.549	Anabas_testudineus
ENSSBOG00000019696	-	98	80.678	ENSAPLG00000007791	HBS1L	100	80.973	Anas_platyrhynchos
ENSSBOG00000019696	-	97	84.673	ENSACAG00000010120	HBS1L	100	80.987	Anolis_carolinensis
ENSSBOG00000019696	-	100	97.753	ENSANAG00000038076	HBS1L	100	97.753	Aotus_nancymaae
ENSSBOG00000019696	-	95	83.333	ENSACLG00000010469	hbs1l	100	72.277	Astatotilapia_calliptera
ENSSBOG00000019696	-	96	79.630	ENSAMXG00000004260	hbs1l	97	79.074	Astyanax_mexicanus
ENSSBOG00000019696	-	100	92.566	ENSBTAG00000020174	HBS1L	100	92.566	Bos_taurus
ENSSBOG00000019696	-	69	50.922	WBGene00010622	K07A12.4	99	41.176	Caenorhabditis_elegans
ENSSBOG00000019696	-	100	97.956	ENSCJAG00000007678	HBS1L	100	97.956	Callithrix_jacchus
ENSSBOG00000019696	-	99	93.382	ENSCAFG00000000226	HBS1L	100	91.837	Canis_familiaris
ENSSBOG00000019696	-	99	93.382	ENSCAFG00020021904	HBS1L	100	91.837	Canis_lupus_dingo
ENSSBOG00000019696	-	100	91.399	ENSCHIG00000010299	HBS1L	100	91.399	Capra_hircus
ENSSBOG00000019696	-	99	93.012	ENSTSYG00000007089	HBS1L	100	93.012	Carlito_syrichta
ENSSBOG00000019696	-	99	78.477	ENSCPOG00000007015	HBS1L	99	78.477	Cavia_porcellus
ENSSBOG00000019696	-	100	97.080	ENSCCAG00000033863	HBS1L	100	98.161	Cebus_capucinus
ENSSBOG00000019696	-	100	95.620	ENSCATG00000043042	HBS1L	100	95.620	Cercocebus_atys
ENSSBOG00000019696	-	100	90.525	ENSCLAG00000004937	HBS1L	100	90.525	Chinchilla_lanigera
ENSSBOG00000019696	-	100	95.335	ENSCSAG00000016791	HBS1L	100	95.335	Chlorocebus_sabaeus
ENSSBOG00000019696	-	97	89.130	ENSCHOG00000001852	HBS1L	97	89.130	Choloepus_hoffmanni
ENSSBOG00000019696	-	99	87.316	ENSCPBG00000017635	HBS1L	100	84.448	Chrysemys_picta_bellii
ENSSBOG00000019696	-	99	47.606	ENSCING00000005592	-	100	48.634	Ciona_intestinalis
ENSSBOG00000019696	-	87	62.911	ENSCSAVG00000002297	-	99	62.911	Ciona_savignyi
ENSSBOG00000019696	-	100	95.474	ENSCANG00000031208	HBS1L	100	95.652	Colobus_angolensis_palliatus
ENSSBOG00000019696	-	99	92.110	ENSCGRG00001024531	Hbs1l	100	90.671	Cricetulus_griseus_chok1gshd
ENSSBOG00000019696	-	99	92.110	ENSCGRG00000017361	Hbs1l	100	90.671	Cricetulus_griseus_crigri
ENSSBOG00000019696	-	95	82.979	ENSCSEG00000002794	hbs1l	93	76.480	Cynoglossus_semilaevis
ENSSBOG00000019696	-	96	89.130	ENSCVAG00000001462	hbs1l	100	71.388	Cyprinodon_variegatus
ENSSBOG00000019696	-	99	91.304	ENSDARG00000036778	hbs1l	100	72.622	Danio_rerio
ENSSBOG00000019696	-	100	91.387	ENSDORG00000005958	Hbs1l	100	91.387	Dipodomys_ordii
ENSSBOG00000019696	-	99	49.256	FBgn0042712	HBS1	100	47.443	Drosophila_melanogaster
ENSSBOG00000019696	-	100	85.985	ENSETEG00000000913	HBS1L	100	85.985	Echinops_telfairi
ENSSBOG00000019696	-	99	65.293	ENSEBUG00000010759	hbs1l	100	65.833	Eptatretus_burgeri
ENSSBOG00000019696	-	100	91.412	ENSEASG00005011148	HBS1L	100	91.557	Equus_asinus_asinus
ENSSBOG00000019696	-	100	91.557	ENSECAG00000004470	HBS1L	100	92.248	Equus_caballus
ENSSBOG00000019696	-	100	86.317	ENSEEUG00000013582	HBS1L	100	86.317	Erinaceus_europaeus
ENSSBOG00000019696	-	84	80.392	ENSELUG00000006444	hbs1l	95	68.486	Esox_lucius
ENSSBOG00000019696	-	100	93.440	ENSFCAG00000001810	HBS1L	100	95.010	Felis_catus
ENSSBOG00000019696	-	93	82.471	ENSFALG00000011898	HBS1L	100	82.609	Ficedula_albicollis
ENSSBOG00000019696	-	100	91.254	ENSFDAG00000011841	HBS1L	100	91.254	Fukomys_damarensis
ENSSBOG00000019696	-	92	86.957	ENSFHEG00000006942	hbs1l	100	71.308	Fundulus_heteroclitus
ENSSBOG00000019696	-	99	73.178	ENSGMOG00000011843	hbs1l	100	73.295	Gadus_morhua
ENSSBOG00000019696	-	100	81.858	ENSGALG00000013962	HBS1L	100	81.858	Gallus_gallus
ENSSBOG00000019696	-	93	89.130	ENSGAFG00000004157	hbs1l	100	72.521	Gambusia_affinis
ENSSBOG00000019696	-	99	72.344	ENSGACG00000011035	hbs1l	100	72.319	Gasterosteus_aculeatus
ENSSBOG00000019696	-	99	86.949	ENSGAGG00000002033	HBS1L	100	83.745	Gopherus_agassizii
ENSSBOG00000019696	-	88	91.026	ENSGGOG00000034956	-	93	97.312	Gorilla_gorilla
ENSSBOG00000019696	-	95	83.333	ENSHBUG00000013424	hbs1l	100	72.277	Haplochromis_burtoni
ENSSBOG00000019696	-	100	90.379	ENSHGLG00000000516	HBS1L	100	90.379	Heterocephalus_glaber_female
ENSSBOG00000019696	-	100	90.379	ENSHGLG00100003550	HBS1L	100	90.379	Heterocephalus_glaber_male
ENSSBOG00000019696	-	99	89.362	ENSHCOG00000007581	hbs1l	94	70.996	Hippocampus_comes
ENSSBOG00000019696	-	95	79.630	ENSIPUG00000010748	hbs1l	100	72.938	Ictalurus_punctatus
ENSSBOG00000019696	-	99	93.934	ENSSTOG00000007551	HBS1L	100	93.168	Ictidomys_tridecemlineatus
ENSSBOG00000019696	-	99	85.777	ENSJJAG00000017024	-	97	85.777	Jaculus_jaculus
ENSSBOG00000019696	-	100	70.365	ENSJJAG00000012660	-	100	70.949	Jaculus_jaculus
ENSSBOG00000019696	-	93	85.106	ENSKMAG00000012130	hbs1l	99	74.842	Kryptolebias_marmoratus
ENSSBOG00000019696	-	93	82.979	ENSLBEG00000002784	hbs1l	99	76.575	Labrus_bergylta
ENSSBOG00000019696	-	79	79.394	ENSLACG00000004528	HBS1L	100	79.394	Latimeria_chalumnae
ENSSBOG00000019696	-	95	89.362	ENSLOCG00000016221	hbs1l	100	72.893	Lepisosteus_oculatus
ENSSBOG00000019696	-	100	90.393	ENSLAFG00000007835	HBS1L	100	90.393	Loxodonta_africana
ENSSBOG00000019696	-	100	95.620	ENSMFAG00000003766	HBS1L	100	95.652	Macaca_fascicularis
ENSSBOG00000019696	-	99	95.652	ENSMMUG00000004802	HBS1L	100	95.652	Macaca_mulatta
ENSSBOG00000019696	-	100	95.620	ENSMNEG00000043942	HBS1L	100	95.652	Macaca_nemestrina
ENSSBOG00000019696	-	99	95.659	ENSMLEG00000043218	HBS1L	100	95.186	Mandrillus_leucophaeus
ENSSBOG00000019696	-	98	79.362	ENSMAMG00000016498	hbs1l	98	79.096	Mastacembelus_armatus
ENSSBOG00000019696	-	86	79.252	ENSMZEG00005024018	-	90	78.022	Maylandia_zebra
ENSSBOG00000019696	-	95	83.333	ENSMZEG00005015575	hbs1l	100	72.277	Maylandia_zebra
ENSSBOG00000019696	-	99	85.294	ENSMGAG00000013065	HBS1L	99	80.323	Meleagris_gallopavo
ENSSBOG00000019696	-	99	92.110	ENSMAUG00000001077	Hbs1l	100	90.816	Mesocricetus_auratus
ENSSBOG00000019696	-	99	93.594	ENSMICG00000001533	-	99	93.594	Microcebus_murinus
ENSSBOG00000019696	-	100	81.487	ENSMICG00000030043	-	96	94.086	Microcebus_murinus
ENSSBOG00000019696	-	100	90.379	ENSMOCG00000023038	Hbs1l	100	90.379	Microtus_ochrogaster
ENSSBOG00000019696	-	97	71.880	ENSMMOG00000015507	hbs1l	99	72.372	Mola_mola
ENSSBOG00000019696	-	100	87.045	ENSMODG00000017499	HBS1L	100	87.045	Monodelphis_domestica
ENSSBOG00000019696	-	99	79.065	ENSMALG00000010768	hbs1l	99	75.929	Monopterus_albus
ENSSBOG00000019696	-	100	88.630	MGP_CAROLIEiJ_G0015162	Hbs1l	100	88.630	Mus_caroli
ENSSBOG00000019696	-	99	90.476	ENSMUSG00000019977	Hbs1l	100	100.000	Mus_musculus
ENSSBOG00000019696	-	100	87.172	MGP_PahariEiJ_G0023782	Hbs1l	100	87.172	Mus_pahari
ENSSBOG00000019696	-	100	88.776	MGP_SPRETEiJ_G0015970	Hbs1l	100	88.776	Mus_spretus
ENSSBOG00000019696	-	100	92.566	ENSMPUG00000014810	HBS1L	100	92.566	Mustela_putorius_furo
ENSSBOG00000019696	-	100	93.285	ENSMLUG00000010618	HBS1L	100	93.285	Myotis_lucifugus
ENSSBOG00000019696	-	99	92.279	ENSNGAG00000015184	Hbs1l	100	89.927	Nannospalax_galili
ENSSBOG00000019696	-	99	78.532	ENSNBRG00000020095	hbs1l	100	76.640	Neolamprologus_brichardi
ENSSBOG00000019696	-	100	95.182	ENSNLEG00000014721	HBS1L	100	95.186	Nomascus_leucogenys
ENSSBOG00000019696	-	82	93.909	ENSMEUG00000003907	HBS1L	81	93.909	Notamacropus_eugenii
ENSSBOG00000019696	-	85	94.262	ENSOPRG00000013595	HBS1L	76	95.041	Ochotona_princeps
ENSSBOG00000019696	-	99	90.469	ENSODEG00000008959	HBS1L	100	90.462	Octodon_degus
ENSSBOG00000019696	-	99	77.677	ENSONIG00000000460	hbs1l	100	72.011	Oreochromis_niloticus
ENSSBOG00000019696	-	99	83.866	ENSOANG00000002684	-	99	83.866	Ornithorhynchus_anatinus
ENSSBOG00000019696	-	100	87.318	ENSOCUG00000011619	HBS1L	99	90.547	Oryctolagus_cuniculus
ENSSBOG00000019696	-	93	79.135	ENSORLG00000016559	hbs1l	100	70.822	Oryzias_latipes
ENSSBOG00000019696	-	93	79.135	ENSORLG00020003827	hbs1l	100	70.680	Oryzias_latipes_hni
ENSSBOG00000019696	-	93	78.947	ENSORLG00015023105	hbs1l	100	70.538	Oryzias_latipes_hsok
ENSSBOG00000019696	-	96	79.562	ENSOMEG00000016715	hbs1l	100	72.380	Oryzias_melastigma
ENSSBOG00000019696	-	100	94.161	ENSOGAG00000012604	HBS1L	100	94.161	Otolemur_garnettii
ENSSBOG00000019696	-	99	91.813	ENSOARG00000014798	-	99	91.813	Ovis_aries
ENSSBOG00000019696	-	100	91.399	ENSOARG00000005671	-	100	91.399	Ovis_aries
ENSSBOG00000019696	-	100	96.496	ENSPPAG00000029900	HBS1L	100	96.496	Pan_paniscus
ENSSBOG00000019696	-	99	94.485	ENSPPRG00000005285	HBS1L	100	94.373	Panthera_pardus
ENSSBOG00000019696	-	99	94.301	ENSPTIG00000015803	HBS1L	100	94.212	Panthera_tigris_altaica
ENSSBOG00000019696	-	100	96.496	ENSPTRG00000018630	HBS1L	100	96.496	Pan_troglodytes
ENSSBOG00000019696	-	100	95.766	ENSPANG00000007075	HBS1L	100	95.766	Papio_anubis
ENSSBOG00000019696	-	92	84.375	ENSPKIG00000023171	hbs1l	100	71.532	Paramormyrops_kingsleyae
ENSSBOG00000019696	-	86	80.303	ENSPSIG00000016467	HBS1L	97	80.976	Pelodiscus_sinensis
ENSSBOG00000019696	-	99	72.157	ENSPMGG00000018051	hbs1l	96	86.096	Periophthalmus_magnuspinnatus
ENSSBOG00000019696	-	100	89.650	ENSPEMG00000014369	Hbs1l	100	89.650	Peromyscus_maniculatus_bairdii
ENSSBOG00000019696	-	93	82.609	ENSPMAG00000002516	hbs1l	100	67.199	Petromyzon_marinus
ENSSBOG00000019696	-	93	83.673	ENSPFOG00000021764	hbs1l	100	71.469	Poecilia_formosa
ENSSBOG00000019696	-	93	87.234	ENSPLAG00000006193	hbs1l	100	71.813	Poecilia_latipinna
ENSSBOG00000019696	-	93	89.130	ENSPMEG00000000925	hbs1l	100	71.813	Poecilia_mexicana
ENSSBOG00000019696	-	93	89.130	ENSPREG00000011270	hbs1l	100	71.530	Poecilia_reticulata
ENSSBOG00000019696	-	100	95.912	ENSPPYG00000017027	HBS1L	100	95.912	Pongo_abelii
ENSSBOG00000019696	-	99	92.620	ENSPCAG00000007002	HBS1L	90	92.791	Procavia_capensis
ENSSBOG00000019696	-	95	91.856	ENSPVAG00000015229	HBS1L	90	91.497	Pteropus_vampyrus
ENSSBOG00000019696	-	95	83.333	ENSPNYG00000013360	hbs1l	100	72.277	Pundamilia_nyererei
ENSSBOG00000019696	-	93	89.130	ENSPNAG00000026721	hbs1l	100	73.669	Pygocentrus_nattereri
ENSSBOG00000019696	-	100	88.338	ENSRNOG00000014531	Hbs1l	100	88.338	Rattus_norvegicus
ENSSBOG00000019696	-	100	96.058	ENSRBIG00000004484	HBS1L	100	96.058	Rhinopithecus_bieti
ENSSBOG00000019696	-	100	95.912	ENSRROG00000026176	HBS1L	100	95.912	Rhinopithecus_roxellana
ENSSBOG00000019696	-	68	39.367	YKR084C	-	73	39.326	Saccharomyces_cerevisiae
ENSSBOG00000019696	-	100	88.792	ENSSHAG00000013509	HBS1L	100	88.792	Sarcophilus_harrisii
ENSSBOG00000019696	-	99	71.243	ENSSFOG00015017544	hbs1l	96	71.098	Scleropages_formosus
ENSSBOG00000019696	-	98	78.343	ENSSMAG00000010621	hbs1l	100	71.004	Scophthalmus_maximus
ENSSBOG00000019696	-	95	81.250	ENSSDUG00000012974	hbs1l	100	72.136	Seriola_dumerili
ENSSBOG00000019696	-	95	81.250	ENSSLDG00000004960	hbs1l	98	79.545	Seriola_lalandi_dorsalis
ENSSBOG00000019696	-	97	91.728	ENSSARG00000006747	HBS1L	100	90.149	Sorex_araneus
ENSSBOG00000019696	-	99	84.630	ENSSPUG00000012389	HBS1L	99	81.606	Sphenodon_punctatus
ENSSBOG00000019696	-	96	93.487	ENSSSCG00000004169	HBS1L	100	92.598	Sus_scrofa
ENSSBOG00000019696	-	99	80.904	ENSTGUG00000011507	HBS1L	99	80.904	Taeniopygia_guttata
ENSSBOG00000019696	-	93	85.106	ENSTRUG00000016128	hbs1l	90	86.486	Takifugu_rubripes
ENSSBOG00000019696	-	99	73.577	ENSTNIG00000016320	hbs1l	99	74.453	Tetraodon_nigroviridis
ENSSBOG00000019696	-	99	100.000	ENSTBEG00000009950	HBS1L	92	100.000	Tupaia_belangeri
ENSSBOG00000019696	-	99	92.117	ENSTTRG00000003715	HBS1L	99	92.117	Tursiops_truncatus
ENSSBOG00000019696	-	99	94.301	ENSUAMG00000001064	HBS1L	100	93.294	Ursus_americanus
ENSSBOG00000019696	-	100	93.294	ENSUMAG00000024395	HBS1L	100	97.297	Ursus_maritimus
ENSSBOG00000019696	-	99	92.435	ENSVPAG00000006280	HBS1L	90	92.606	Vicugna_pacos
ENSSBOG00000019696	-	99	93.566	ENSVVUG00000000295	HBS1L	100	91.983	Vulpes_vulpes
ENSSBOG00000019696	-	95	82.000	ENSXETG00000003726	hbs1l	100	75.802	Xenopus_tropicalis
ENSSBOG00000019696	-	99	73.538	ENSXCOG00000005323	hbs1l	100	73.324	Xiphophorus_couchianus
ENSSBOG00000019696	-	93	89.130	ENSXMAG00000004359	hbs1l	100	72.238	Xiphophorus_maculatus