EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000019731 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 4272 bases
Position: chrJH378127.1:15268265-15272536
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000005683	zf-RanBP	PF00641.18	6.5e-07	1	1
ENSSBOP00000005704	zf-RanBP	PF00641.18	9.1e-07	1	1
ENSSBOP00000005704	RRM_1	PF00076.22	1.2e-10	1	1
ENSSBOP00000005683	RRM_1	PF00076.22	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000022343	-	1542	-	ENSSBOP00000005683	513 (aa)	-	A0A2K6SE91
ENSSBOT00000022365	-	1395	-	ENSSBOP00000005704	464 (aa)	-	A0A2K6SEA0
ENSSBOT00000022359	-	609	-	ENSSBOP00000005699	202 (aa)	-	A0A2K6SE92
ENSSBOT00000022353	-	411	-	ENSSBOP00000005693	136 (aa)	-	A0A2K6SE96

Gene Model

Click here to download ENSSBOG00000019731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000019731's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000019731	-	74	36.089	ENSSBOG00000029942	EWSR1	65	40.152
ENSSBOG00000019731	-	81	34.068	ENSSBOG00000026631	-	89	33.667
ENSSBOG00000019731	-	64	34.527	ENSSBOG00000032932	-	65	38.520
ENSSBOG00000019731	-	78	68.407	ENSSBOG00000032185	-	72	76.412
ENSSBOG00000019731	-	66	34.925	ENSSBOG00000032705	-	53	40.525

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000019731	-	100	90.517	ENSG00000270647	TAF15	100	93.750	Homo_sapiens
ENSSBOG00000019731	-	77	92.640	ENSAMEG00000014860	TAF15	69	92.132	Ailuropoda_melanoleuca
ENSSBOG00000019731	-	77	67.517	ENSAPLG00000006217	TAF15	90	69.885	Anas_platyrhynchos
ENSSBOG00000019731	-	87	95.964	ENSANAG00000020904	TAF15	75	95.964	Aotus_nancymaae
ENSSBOG00000019731	-	100	90.733	ENSCJAG00000014961	TAF15	100	90.733	Callithrix_jacchus
ENSSBOG00000019731	-	77	94.162	ENSCAFG00000018176	TAF15	69	94.162	Canis_familiaris
ENSSBOG00000019731	-	77	94.162	ENSCAFG00020004027	TAF15	70	94.162	Canis_lupus_dingo
ENSSBOG00000019731	-	65	91.419	ENSCHIG00000019985	-	77	91.419	Capra_hircus
ENSSBOG00000019731	-	77	95.939	ENSTSYG00000003930	TAF15	72	92.640	Carlito_syrichta
ENSSBOG00000019731	-	100	77.468	ENSCAPG00000002530	-	80	94.915	Cavia_aperea
ENSSBOG00000019731	-	100	77.039	ENSCPOG00000010259	-	79	93.220	Cavia_porcellus
ENSSBOG00000019731	-	100	84.483	ENSCCAG00000036025	TAF15	100	84.483	Cebus_capucinus
ENSSBOG00000019731	-	100	90.948	ENSCATG00000044848	TAF15	100	90.948	Cercocebus_atys
ENSSBOG00000019731	-	73	94.149	ENSCLAG00000008940	TAF15	67	94.149	Chinchilla_lanigera
ENSSBOG00000019731	-	87	96.861	ENSCSAG00000006241	TAF15	75	96.861	Chlorocebus_sabaeus
ENSSBOG00000019731	-	73	89.628	ENSCHOG00000002729	TAF15	60	89.628	Choloepus_hoffmanni
ENSSBOG00000019731	-	76	71.960	ENSCPBG00000027820	TAF15	90	72.549	Chrysemys_picta_bellii
ENSSBOG00000019731	-	65	94.389	ENSCANG00000042639	-	84	94.389	Colobus_angolensis_palliatus
ENSSBOG00000019731	-	92	96.923	ENSCANG00000038846	-	100	96.923	Colobus_angolensis_palliatus
ENSSBOG00000019731	-	72	92.560	ENSCGRG00001012011	Taf15	67	87.310	Cricetulus_griseus_chok1gshd
ENSSBOG00000019731	-	76	94.629	ENSCGRG00000005110	Taf15	70	94.629	Cricetulus_griseus_crigri
ENSSBOG00000019731	-	77	94.924	ENSDNOG00000006956	TAF15	73	94.924	Dasypus_novemcinctus
ENSSBOG00000019731	-	77	81.218	ENSDORG00000014619	Taf15	68	82.487	Dipodomys_ordii
ENSSBOG00000019731	-	70	93.593	ENSETEG00000001337	TAF15	64	93.593	Echinops_telfairi
ENSSBOG00000019731	-	99	84.731	ENSEASG00005011235	TAF15	81	100.000	Equus_asinus_asinus
ENSSBOG00000019731	-	77	95.685	ENSECAG00000000718	TAF15	66	95.685	Equus_caballus
ENSSBOG00000019731	-	99	86.825	ENSFCAG00000018167	TAF15	99	86.393	Felis_catus
ENSSBOG00000019731	-	75	71.322	ENSFALG00000009696	TAF15	90	75.373	Ficedula_albicollis
ENSSBOG00000019731	-	77	92.640	ENSFDAG00000008577	TAF15	71	92.640	Fukomys_damarensis
ENSSBOG00000019731	-	76	69.321	ENSGALG00000002060	TAF15	90	69.585	Gallus_gallus
ENSSBOG00000019731	-	100	90.517	ENSGGOG00000005693	TAF15	100	90.517	Gorilla_gorilla
ENSSBOG00000019731	-	77	92.640	ENSHGLG00000005292	-	71	92.640	Heterocephalus_glaber_female
ENSSBOG00000019731	-	97	66.667	ENSHGLG00000002551	-	82	91.837	Heterocephalus_glaber_female
ENSSBOG00000019731	-	99	66.739	ENSHGLG00100002825	-	83	91.525	Heterocephalus_glaber_male
ENSSBOG00000019731	-	74	92.876	ENSHGLG00100013953	-	76	91.339	Heterocephalus_glaber_male
ENSSBOG00000019731	-	77	94.416	ENSSTOG00000002081	TAF15	69	93.909	Ictidomys_tridecemlineatus
ENSSBOG00000019731	-	72	96.131	ENSJJAG00000010606	Taf15	67	91.327	Jaculus_jaculus
ENSSBOG00000019731	-	73	57.107	ENSLACG00000018479	-	91	55.107	Latimeria_chalumnae
ENSSBOG00000019731	-	77	94.670	ENSLAFG00000018332	TAF15	67	94.670	Loxodonta_africana
ENSSBOG00000019731	-	87	97.085	ENSMFAG00000041941	TAF15	76	97.085	Macaca_fascicularis
ENSSBOG00000019731	-	92	98.322	ENSMMUG00000047590	-	70	98.322	Macaca_mulatta
ENSSBOG00000019731	-	87	97.085	ENSMMUG00000047780	TAF15	76	97.085	Macaca_mulatta
ENSSBOG00000019731	-	100	90.948	ENSMNEG00000044227	TAF15	100	90.948	Macaca_nemestrina
ENSSBOG00000019731	-	100	90.948	ENSMLEG00000028534	TAF15	100	90.948	Mandrillus_leucophaeus
ENSSBOG00000019731	-	75	67.051	ENSMGAG00000003842	TAF15	84	68.349	Meleagris_gallopavo
ENSSBOG00000019731	-	77	94.924	ENSMICG00000017057	TAF15	67	94.924	Microcebus_murinus
ENSSBOG00000019731	-	77	94.416	ENSMOCG00000015121	Taf15	70	94.416	Microtus_ochrogaster
ENSSBOG00000019731	-	77	88.608	ENSMODG00000019123	TAF15	88	89.367	Monodelphis_domestica
ENSSBOG00000019731	-	77	94.924	MGP_CAROLIEiJ_G0016876	Taf15	65	97.357	Mus_caroli
ENSSBOG00000019731	-	77	95.178	ENSMUSG00000020680	Taf15	70	97.797	Mus_musculus
ENSSBOG00000019731	-	77	94.670	MGP_PahariEiJ_G0018007	Taf15	67	97.797	Mus_pahari
ENSSBOG00000019731	-	77	95.178	MGP_SPRETEiJ_G0017720	Taf15	67	97.797	Mus_spretus
ENSSBOG00000019731	-	73	95.213	ENSMPUG00000014948	TAF15	85	95.213	Mustela_putorius_furo
ENSSBOG00000019731	-	77	93.909	ENSMLUG00000002870	TAF15	76	93.909	Myotis_lucifugus
ENSSBOG00000019731	-	72	95.522	ENSNGAG00000017633	-	66	89.086	Nannospalax_galili
ENSSBOG00000019731	-	99	71.274	ENSNGAG00000019473	-	100	71.058	Nannospalax_galili
ENSSBOG00000019731	-	100	89.440	ENSNLEG00000014063	TAF15	100	89.440	Nomascus_leucogenys
ENSSBOG00000019731	-	62	87.281	ENSMEUG00000006009	-	65	71.244	Notamacropus_eugenii
ENSSBOG00000019731	-	100	75.693	ENSODEG00000004747	-	83	96.610	Octodon_degus
ENSSBOG00000019731	-	99	87.582	ENSODEG00000012915	-	99	87.582	Octodon_degus
ENSSBOG00000019731	-	81	91.429	ENSODEG00000001772	-	100	70.905	Octodon_degus
ENSSBOG00000019731	-	75	69.863	ENSOANG00000014273	TAF15	82	69.635	Ornithorhynchus_anatinus
ENSSBOG00000019731	-	76	95.663	ENSOCUG00000002838	TAF15	66	95.663	Oryctolagus_cuniculus
ENSSBOG00000019731	-	77	94.177	ENSOGAG00000011719	TAF15	67	94.162	Otolemur_garnettii
ENSSBOG00000019731	-	77	92.640	ENSOARG00000000081	-	76	92.640	Ovis_aries
ENSSBOG00000019731	-	76	95.128	ENSOARG00000005512	-	87	95.165	Ovis_aries
ENSSBOG00000019731	-	100	90.302	ENSPPAG00000043510	-	100	90.302	Pan_paniscus
ENSSBOG00000019731	-	77	94.670	ENSPPRG00000003286	TAF15	68	94.670	Panthera_pardus
ENSSBOG00000019731	-	99	89.201	ENSPTIG00000016445	TAF15	99	84.017	Panthera_tigris_altaica
ENSSBOG00000019731	-	100	90.302	ENSPTRG00000009026	TAF15	100	90.302	Pan_troglodytes
ENSSBOG00000019731	-	100	90.948	ENSPANG00000022930	TAF15	100	90.948	Papio_anubis
ENSSBOG00000019731	-	76	70.720	ENSPSIG00000014222	TAF15	90	72.397	Pelodiscus_sinensis
ENSSBOG00000019731	-	72	96.131	ENSPEMG00000018715	Taf15	67	90.355	Peromyscus_maniculatus_bairdii
ENSSBOG00000019731	-	77	89.873	ENSPCIG00000003783	TAF15	71	89.367	Phascolarctos_cinereus
ENSSBOG00000019731	-	87	95.740	ENSPPYG00000008194	TAF15	72	95.740	Pongo_abelii
ENSSBOG00000019731	-	87	85.682	ENSPCAG00000009582	TAF15	72	85.682	Procavia_capensis
ENSSBOG00000019731	-	77	94.670	ENSPCOG00000007032	TAF15	67	94.670	Propithecus_coquereli
ENSSBOG00000019731	-	87	80.493	ENSPVAG00000003952	TAF15	71	80.493	Pteropus_vampyrus
ENSSBOG00000019731	-	77	94.911	ENSRNOG00000058393	Taf15	70	94.924	Rattus_norvegicus
ENSSBOG00000019731	-	77	94.911	ENSRNOG00000054871	LOC103694865	70	94.924	Rattus_norvegicus
ENSSBOG00000019731	-	100	90.733	ENSRBIG00000043192	TAF15	100	90.733	Rhinopithecus_bieti
ENSSBOG00000019731	-	100	90.733	ENSRROG00000029426	TAF15	100	90.733	Rhinopithecus_roxellana
ENSSBOG00000019731	-	77	90.380	ENSSHAG00000003105	TAF15	92	78.755	Sarcophilus_harrisii
ENSSBOG00000019731	-	86	93.454	ENSSARG00000012092	TAF15	69	93.909	Sorex_araneus
ENSSBOG00000019731	-	76	63.532	ENSSPUG00000006042	TAF15	90	64.719	Sphenodon_punctatus
ENSSBOG00000019731	-	77	93.655	ENSSSCG00000017707	TAF15	65	93.655	Sus_scrofa
ENSSBOG00000019731	-	76	74.307	ENSTGUG00000004702	TAF15	93	76.382	Taeniopygia_guttata
ENSSBOG00000019731	-	77	94.924	ENSTTRG00000014145	TAF15	71	94.924	Tursiops_truncatus
ENSSBOG00000019731	-	78	88.221	ENSUAMG00000004942	TAF15	74	92.042	Ursus_americanus
ENSSBOG00000019731	-	77	93.909	ENSUMAG00000016876	TAF15	69	94.388	Ursus_maritimus
ENSSBOG00000019731	-	63	90.462	ENSVPAG00000001667	TAF15	53	90.462	Vicugna_pacos
ENSSBOG00000019731	-	77	94.162	ENSVVUG00000020375	TAF15	70	94.162	Vulpes_vulpes
ENSSBOG00000019731	-	72	47.477	ENSXETG00000013477	taf15	92	48.421	Xenopus_tropicalis