EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000019775 (Gene tree)
Gene ID: 101047177
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 35941 bases
Position: chrJH378105.1:54763070-54799010
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000006064	CPSF_A	PF03178.15	1e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000022775	DDB1-201	4604	XM_010335354	ENSSBOP00000006064	1140 (aa)	XP_010333656	A0A2K6SFA0

Gene Model

Click here to download ENSSBOG00000019775's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03420	Nucleotide excision repair	KEGG
sbq04120	Ubiquitin mediated proteolysis	KEGG
sbq05161	Hepatitis B	KEGG
sbq05170	Human immunodeficiency virus 1 infection	KEGG
sbq05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000019775's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000019775	DDB1	100	99.912	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSSBOG00000019775	DDB1	98	91.465	ENSAPOG00000005036	ddb1	99	91.531	Acanthochromis_polyacanthus
ENSSBOG00000019775	DDB1	100	99.825	ENSAMEG00000016518	DDB1	100	99.825	Ailuropoda_melanoleuca
ENSSBOG00000019775	DDB1	86	91.837	ENSACIG00000020624	ddb1	99	91.837	Amphilophus_citrinellus
ENSSBOG00000019775	DDB1	100	91.140	ENSAOCG00000003066	ddb1	100	91.140	Amphiprion_ocellaris
ENSSBOG00000019775	DDB1	100	91.228	ENSAPEG00000000092	ddb1	100	91.228	Amphiprion_percula
ENSSBOG00000019775	DDB1	94	91.721	ENSATEG00000020571	ddb1	97	91.721	Anabas_testudineus
ENSSBOG00000019775	DDB1	98	96.533	ENSAPLG00000007174	DDB1	99	96.533	Anas_platyrhynchos
ENSSBOG00000019775	DDB1	100	97.018	ENSACAG00000017758	DDB1	100	97.018	Anolis_carolinensis
ENSSBOG00000019775	DDB1	100	99.912	ENSANAG00000021878	DDB1	100	99.912	Aotus_nancymaae
ENSSBOG00000019775	DDB1	100	91.491	ENSACLG00000012401	ddb1	100	91.491	Astatotilapia_calliptera
ENSSBOG00000019775	DDB1	100	99.649	ENSBTAG00000021569	DDB1	93	99.649	Bos_taurus
ENSSBOG00000019775	DDB1	100	37.126	WBGene00010890	ddb-1	100	37.040	Caenorhabditis_elegans
ENSSBOG00000019775	DDB1	100	99.912	ENSCJAG00000019319	DDB1	100	99.912	Callithrix_jacchus
ENSSBOG00000019775	DDB1	100	99.825	ENSCAFG00000016264	DDB1	100	99.825	Canis_familiaris
ENSSBOG00000019775	DDB1	94	99.535	ENSCAFG00020012722	DDB1	99	99.535	Canis_lupus_dingo
ENSSBOG00000019775	DDB1	100	99.649	ENSCHIG00000014969	DDB1	100	99.649	Capra_hircus
ENSSBOG00000019775	DDB1	100	99.211	ENSTSYG00000008027	DDB1	100	99.211	Carlito_syrichta
ENSSBOG00000019775	DDB1	98	99.017	ENSCAPG00000010786	DDB1	100	99.017	Cavia_aperea
ENSSBOG00000019775	DDB1	100	99.035	ENSCPOG00000009956	DDB1	100	99.035	Cavia_porcellus
ENSSBOG00000019775	DDB1	100	99.912	ENSCCAG00000035883	DDB1	100	99.912	Cebus_capucinus
ENSSBOG00000019775	DDB1	100	97.396	ENSCATG00000044495	DDB1	100	97.396	Cercocebus_atys
ENSSBOG00000019775	DDB1	100	99.123	ENSCLAG00000004126	DDB1	100	99.123	Chinchilla_lanigera
ENSSBOG00000019775	DDB1	100	99.912	ENSCSAG00000006392	DDB1	100	99.912	Chlorocebus_sabaeus
ENSSBOG00000019775	DDB1	88	92.614	ENSCHOG00000011377	DDB1	90	92.614	Choloepus_hoffmanni
ENSSBOG00000019775	DDB1	100	97.719	ENSCPBG00000017728	DDB1	100	97.719	Chrysemys_picta_bellii
ENSSBOG00000019775	DDB1	100	61.892	ENSCING00000007437	-	100	61.806	Ciona_intestinalis
ENSSBOG00000019775	DDB1	94	60.276	ENSCSAVG00000004783	-	100	60.276	Ciona_savignyi
ENSSBOG00000019775	DDB1	100	99.912	ENSCANG00000019948	DDB1	100	99.912	Colobus_angolensis_palliatus
ENSSBOG00000019775	DDB1	100	99.737	ENSCGRG00001016599	Ddb1	100	99.737	Cricetulus_griseus_chok1gshd
ENSSBOG00000019775	DDB1	100	99.737	ENSCGRG00000013427	Ddb1	100	99.737	Cricetulus_griseus_crigri
ENSSBOG00000019775	DDB1	93	91.235	ENSCSEG00000012499	ddb1	99	89.676	Cynoglossus_semilaevis
ENSSBOG00000019775	DDB1	94	91.426	ENSCVAG00000019531	ddb1	99	91.426	Cyprinodon_variegatus
ENSSBOG00000019775	DDB1	100	88.354	ENSDARG00000074431	ddb1	100	88.472	Danio_rerio
ENSSBOG00000019775	DDB1	94	99.163	ENSDNOG00000014884	DDB1	97	99.163	Dasypus_novemcinctus
ENSSBOG00000019775	DDB1	84	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSSBOG00000019775	DDB1	100	61.048	FBgn0260962	pic	100	60.839	Drosophila_melanogaster
ENSSBOG00000019775	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSSBOG00000019775	DDB1	78	84.927	ENSEBUG00000014593	ddb1	97	84.927	Eptatretus_burgeri
ENSSBOG00000019775	DDB1	100	99.649	ENSEASG00005008184	DDB1	100	99.649	Equus_asinus_asinus
ENSSBOG00000019775	DDB1	100	99.561	ENSECAG00000012136	DDB1	100	99.561	Equus_caballus
ENSSBOG00000019775	DDB1	85	97.306	ENSEEUG00000003194	DDB1	85	97.306	Erinaceus_europaeus
ENSSBOG00000019775	DDB1	100	91.053	ENSELUG00000023868	ddb1	100	91.053	Esox_lucius
ENSSBOG00000019775	DDB1	100	99.825	ENSFCAG00000029716	DDB1	100	99.825	Felis_catus
ENSSBOG00000019775	DDB1	100	96.938	ENSFALG00000011981	DDB1	100	96.938	Ficedula_albicollis
ENSSBOG00000019775	DDB1	100	99.211	ENSFDAG00000005128	DDB1	100	99.211	Fukomys_damarensis
ENSSBOG00000019775	DDB1	90	90.980	ENSFHEG00000022133	ddb1	98	90.980	Fundulus_heteroclitus
ENSSBOG00000019775	DDB1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSSBOG00000019775	DDB1	100	97.105	ENSGALG00000042333	DDB1	100	97.105	Gallus_gallus
ENSSBOG00000019775	DDB1	94	91.240	ENSGAFG00000013142	ddb1	99	91.240	Gambusia_affinis
ENSSBOG00000019775	DDB1	96	90.651	ENSGACG00000017182	ddb1	100	90.651	Gasterosteus_aculeatus
ENSSBOG00000019775	DDB1	95	97.786	ENSGAGG00000014124	DDB1	100	97.786	Gopherus_agassizii
ENSSBOG00000019775	DDB1	100	99.912	ENSGGOG00000004052	DDB1	100	99.912	Gorilla_gorilla
ENSSBOG00000019775	DDB1	100	91.491	ENSHBUG00000008873	ddb1	100	91.491	Haplochromis_burtoni
ENSSBOG00000019775	DDB1	100	98.947	ENSHGLG00000018430	DDB1	100	98.947	Heterocephalus_glaber_female
ENSSBOG00000019775	DDB1	100	97.895	ENSHGLG00100014475	DDB1	100	97.895	Heterocephalus_glaber_male
ENSSBOG00000019775	DDB1	94	90.985	ENSHCOG00000018670	ddb1	98	90.985	Hippocampus_comes
ENSSBOG00000019775	DDB1	100	90.526	ENSIPUG00000005612	DDB1	100	90.526	Ictalurus_punctatus
ENSSBOG00000019775	DDB1	100	99.737	ENSSTOG00000007552	DDB1	100	99.737	Ictidomys_tridecemlineatus
ENSSBOG00000019775	DDB1	100	99.561	ENSJJAG00000017769	Ddb1	100	99.561	Jaculus_jaculus
ENSSBOG00000019775	DDB1	94	91.426	ENSKMAG00000002315	ddb1	99	91.426	Kryptolebias_marmoratus
ENSSBOG00000019775	DDB1	85	91.503	ENSLBEG00000017065	ddb1	99	91.503	Labrus_bergylta
ENSSBOG00000019775	DDB1	100	93.608	ENSLACG00000017611	DDB1	100	93.608	Latimeria_chalumnae
ENSSBOG00000019775	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSSBOG00000019775	DDB1	100	99.561	ENSLAFG00000011513	DDB1	100	99.561	Loxodonta_africana
ENSSBOG00000019775	DDB1	100	99.912	ENSMFAG00000042035	DDB1	100	99.912	Macaca_fascicularis
ENSSBOG00000019775	DDB1	99	99.912	ENSMMUG00000002691	DDB1	99	99.912	Macaca_mulatta
ENSSBOG00000019775	DDB1	100	99.912	ENSMNEG00000031559	DDB1	100	99.912	Macaca_nemestrina
ENSSBOG00000019775	DDB1	100	99.912	ENSMLEG00000044136	DDB1	100	99.912	Mandrillus_leucophaeus
ENSSBOG00000019775	DDB1	100	91.491	ENSMAMG00000014372	ddb1	100	91.491	Mastacembelus_armatus
ENSSBOG00000019775	DDB1	100	91.404	ENSMZEG00005013835	ddb1	100	91.404	Maylandia_zebra
ENSSBOG00000019775	DDB1	94	96.462	ENSMGAG00000004990	DDB1	100	96.462	Meleagris_gallopavo
ENSSBOG00000019775	DDB1	100	99.737	ENSMAUG00000012926	Ddb1	100	99.737	Mesocricetus_auratus
ENSSBOG00000019775	DDB1	100	99.737	ENSMICG00000013703	DDB1	100	99.737	Microcebus_murinus
ENSSBOG00000019775	DDB1	100	99.474	ENSMOCG00000020499	Ddb1	100	99.474	Microtus_ochrogaster
ENSSBOG00000019775	DDB1	86	91.633	ENSMMOG00000001758	ddb1	99	91.633	Mola_mola
ENSSBOG00000019775	DDB1	100	89.273	ENSMODG00000020353	DDB1	100	89.273	Monodelphis_domestica
ENSSBOG00000019775	DDB1	100	91.491	ENSMALG00000014071	ddb1	100	91.491	Monopterus_albus
ENSSBOG00000019775	DDB1	100	99.649	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.649	Mus_caroli
ENSSBOG00000019775	DDB1	100	99.561	ENSMUSG00000024740	Ddb1	100	99.561	Mus_musculus
ENSSBOG00000019775	DDB1	100	99.649	MGP_PahariEiJ_G0014189	Ddb1	100	99.649	Mus_pahari
ENSSBOG00000019775	DDB1	100	99.649	MGP_SPRETEiJ_G0023609	Ddb1	100	99.649	Mus_spretus
ENSSBOG00000019775	DDB1	100	96.491	ENSMPUG00000014200	DDB1	100	96.491	Mustela_putorius_furo
ENSSBOG00000019775	DDB1	100	99.386	ENSMLUG00000013232	DDB1	100	99.386	Myotis_lucifugus
ENSSBOG00000019775	DDB1	100	99.386	ENSNGAG00000009384	Ddb1	100	99.386	Nannospalax_galili
ENSSBOG00000019775	DDB1	100	91.579	ENSNBRG00000019581	ddb1	100	91.579	Neolamprologus_brichardi
ENSSBOG00000019775	DDB1	100	96.788	ENSNLEG00000002022	DDB1	100	96.788	Nomascus_leucogenys
ENSSBOG00000019775	DDB1	91	100.000	ENSMEUG00000001099	DDB1	93	100.000	Notamacropus_eugenii
ENSSBOG00000019775	DDB1	90	90.883	ENSOPRG00000008254	DDB1	90	90.883	Ochotona_princeps
ENSSBOG00000019775	DDB1	100	98.947	ENSODEG00000002419	DDB1	100	98.947	Octodon_degus
ENSSBOG00000019775	DDB1	100	91.491	ENSONIG00000005804	ddb1	100	91.491	Oreochromis_niloticus
ENSSBOG00000019775	DDB1	91	98.159	ENSOANG00000004897	DDB1	100	98.159	Ornithorhynchus_anatinus
ENSSBOG00000019775	DDB1	100	99.737	ENSOCUG00000001667	DDB1	100	99.737	Oryctolagus_cuniculus
ENSSBOG00000019775	DDB1	96	89.918	ENSORLG00000001399	ddb1	98	91.162	Oryzias_latipes
ENSSBOG00000019775	DDB1	96	89.826	ENSORLG00020001277	ddb1	97	89.826	Oryzias_latipes_hni
ENSSBOG00000019775	DDB1	94	90.977	ENSORLG00015002080	ddb1	99	90.977	Oryzias_latipes_hsok
ENSSBOG00000019775	DDB1	96	89.790	ENSOMEG00000006181	ddb1	99	89.790	Oryzias_melastigma
ENSSBOG00000019775	DDB1	100	99.561	ENSOGAG00000016103	DDB1	100	99.561	Otolemur_garnettii
ENSSBOG00000019775	DDB1	99	99.644	ENSOARG00000011716	DDB1	98	99.644	Ovis_aries
ENSSBOG00000019775	DDB1	100	99.912	ENSPPAG00000035343	DDB1	100	99.912	Pan_paniscus
ENSSBOG00000019775	DDB1	100	99.825	ENSPPRG00000013300	DDB1	100	99.825	Panthera_pardus
ENSSBOG00000019775	DDB1	98	99.821	ENSPTIG00000006909	DDB1	98	99.821	Panthera_tigris_altaica
ENSSBOG00000019775	DDB1	100	99.912	ENSPTRG00000003737	DDB1	100	99.912	Pan_troglodytes
ENSSBOG00000019775	DDB1	100	99.912	ENSPANG00000000242	DDB1	100	99.912	Papio_anubis
ENSSBOG00000019775	DDB1	94	91.333	ENSPKIG00000019213	ddb1	94	91.333	Paramormyrops_kingsleyae
ENSSBOG00000019775	DDB1	98	97.064	ENSPSIG00000013275	DDB1	100	97.064	Pelodiscus_sinensis
ENSSBOG00000019775	DDB1	86	91.531	ENSPMGG00000021179	ddb1	99	91.531	Periophthalmus_magnuspinnatus
ENSSBOG00000019775	DDB1	100	99.737	ENSPEMG00000012241	Ddb1	100	99.737	Peromyscus_maniculatus_bairdii
ENSSBOG00000019775	DDB1	89	86.837	ENSPMAG00000008479	ddb1	100	86.837	Petromyzon_marinus
ENSSBOG00000019775	DDB1	100	99.035	ENSPCIG00000002643	DDB1	100	99.035	Phascolarctos_cinereus
ENSSBOG00000019775	DDB1	100	90.885	ENSPFOG00000002768	ddb1	100	90.885	Poecilia_formosa
ENSSBOG00000019775	DDB1	100	90.702	ENSPLAG00000017227	ddb1	100	90.702	Poecilia_latipinna
ENSSBOG00000019775	DDB1	100	90.702	ENSPMEG00000011398	ddb1	100	90.702	Poecilia_mexicana
ENSSBOG00000019775	DDB1	94	91.349	ENSPREG00000004440	ddb1	98	91.349	Poecilia_reticulata
ENSSBOG00000019775	DDB1	100	94.939	ENSPPYG00000003193	DDB1	100	94.939	Pongo_abelii
ENSSBOG00000019775	DDB1	85	99.254	ENSPCAG00000011040	DDB1	85	99.254	Procavia_capensis
ENSSBOG00000019775	DDB1	100	98.161	ENSPCOG00000015176	DDB1	100	98.161	Propithecus_coquereli
ENSSBOG00000019775	DDB1	100	99.649	ENSPVAG00000003847	DDB1	100	99.649	Pteropus_vampyrus
ENSSBOG00000019775	DDB1	94	91.333	ENSPNAG00000006635	ddb1	97	91.333	Pygocentrus_nattereri
ENSSBOG00000019775	DDB1	100	99.649	ENSRNOG00000020715	Ddb1	100	99.649	Rattus_norvegicus
ENSSBOG00000019775	DDB1	100	99.912	ENSRBIG00000033611	DDB1	100	99.912	Rhinopithecus_bieti
ENSSBOG00000019775	DDB1	100	99.912	ENSRROG00000041407	DDB1	100	99.912	Rhinopithecus_roxellana
ENSSBOG00000019775	DDB1	94	97.009	ENSSHAG00000011600	DDB1	100	97.009	Sarcophilus_harrisii
ENSSBOG00000019775	DDB1	94	91.450	ENSSFOG00015011151	ddb1	97	91.450	Scleropages_formosus
ENSSBOG00000019775	DDB1	100	91.053	ENSSMAG00000009495	ddb1	100	91.053	Scophthalmus_maximus
ENSSBOG00000019775	DDB1	100	91.404	ENSSDUG00000004642	ddb1	100	91.404	Seriola_dumerili
ENSSBOG00000019775	DDB1	100	91.404	ENSSLDG00000015804	ddb1	100	91.404	Seriola_lalandi_dorsalis
ENSSBOG00000019775	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSSBOG00000019775	DDB1	100	97.895	ENSSPUG00000019338	DDB1	100	97.895	Sphenodon_punctatus
ENSSBOG00000019775	DDB1	94	91.628	ENSSPAG00000009888	ddb1	99	91.628	Stegastes_partitus
ENSSBOG00000019775	DDB1	100	98.772	ENSSSCG00000013094	DDB1	100	98.772	Sus_scrofa
ENSSBOG00000019775	DDB1	100	97.105	ENSTGUG00000006414	DDB1	100	97.105	Taeniopygia_guttata
ENSSBOG00000019775	DDB1	94	90.308	ENSTRUG00000016682	ddb1	98	90.308	Takifugu_rubripes
ENSSBOG00000019775	DDB1	88	85.030	ENSTNIG00000009565	ddb1	99	85.030	Tetraodon_nigroviridis
ENSSBOG00000019775	DDB1	92	94.648	ENSTTRG00000011055	DDB1	94	94.648	Tursiops_truncatus
ENSSBOG00000019775	DDB1	94	99.535	ENSUAMG00000017793	DDB1	93	99.535	Ursus_americanus
ENSSBOG00000019775	DDB1	94	99.535	ENSUMAG00000011788	DDB1	98	99.535	Ursus_maritimus
ENSSBOG00000019775	DDB1	90	100.000	ENSVPAG00000007963	DDB1	92	100.000	Vicugna_pacos
ENSSBOG00000019775	DDB1	100	99.737	ENSVVUG00000004987	DDB1	100	99.737	Vulpes_vulpes
ENSSBOG00000019775	DDB1	100	93.269	ENSXETG00000008820	ddb1	100	93.269	Xenopus_tropicalis
ENSSBOG00000019775	DDB1	86	91.327	ENSXCOG00000013956	ddb1	99	91.327	Xiphophorus_couchianus
ENSSBOG00000019775	DDB1	94	91.240	ENSXMAG00000000022	ddb1	99	91.240	Xiphophorus_maculatus