EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000019860 (Gene tree)
Gene ID: 101048895
Gene Symbol: FAM172A
Alias: C5orf21|DKFZP564D172|Toupee
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 504535 bases
Position: chrJH378106.1:46094454-46598988
Accession: 25365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000005927	Arb2	PF09757.9	3.9e-09	1	1
ENSSBOP00000005920	Arb2	PF09757.9	4.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000022655	FAM172A-204	885	-	ENSSBOP00000005950	294 (aa)	-	A0A2K6SEY1
ENSSBOT00000022643	FAM172A-203	921	XM_003920754	ENSSBOP00000005938	306 (aa)	XP_003920803	A0A2K6SEY2
ENSSBOT00000022629	FAM172A-202	1614	-	ENSSBOP00000005927	394 (aa)	-	A0A2K6SEX4
ENSSBOT00000022623	FAM172A-201	5124	XM_003920753	ENSSBOP00000005920	416 (aa)	XP_003920802	A0A2K6SEU9

Gene Model

Click here to download ENSSBOG00000019860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000019860's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000019860	FAM172A	100	98.798	ENSG00000113391	FAM172A	100	98.798	Homo_sapiens
ENSSBOG00000019860	FAM172A	100	86.779	ENSAPLG00000004055	FAM172A	97	87.871	Anas_platyrhynchos
ENSSBOG00000019860	FAM172A	54	39.827	ENSAPLG00000011555	-	97	39.827	Anas_platyrhynchos
ENSSBOG00000019860	FAM172A	96	86.579	ENSACAG00000013305	FAM172A	95	88.798	Anolis_carolinensis
ENSSBOG00000019860	FAM172A	96	90.814	ENSANAG00000035869	FAM172A	93	100.000	Aotus_nancymaae
ENSSBOG00000019860	FAM172A	100	97.596	ENSBTAG00000050195	FAM172A	100	97.596	Bos_taurus
ENSSBOG00000019860	FAM172A	100	99.760	ENSCJAG00000010444	FAM172A	100	99.760	Callithrix_jacchus
ENSSBOG00000019860	FAM172A	94	98.645	ENSCAFG00000008064	FAM172A	99	98.649	Canis_familiaris
ENSSBOG00000019860	FAM172A	100	97.115	ENSCAFG00020006210	FAM172A	100	97.115	Canis_lupus_dingo
ENSSBOG00000019860	FAM172A	100	97.356	ENSCHIG00000008440	FAM172A	100	97.356	Capra_hircus
ENSSBOG00000019860	FAM172A	68	97.368	ENSTSYG00000006286	FAM172A	85	97.368	Carlito_syrichta
ENSSBOG00000019860	FAM172A	57	84.956	ENSCAPG00000014103	-	100	84.956	Cavia_aperea
ENSSBOG00000019860	FAM172A	100	99.279	ENSCCAG00000023116	FAM172A	100	99.279	Cebus_capucinus
ENSSBOG00000019860	FAM172A	94	96.477	ENSCLAG00000005472	FAM172A	100	98.734	Chinchilla_lanigera
ENSSBOG00000019860	FAM172A	86	44.173	ENSCPBG00000004402	-	96	44.173	Chrysemys_picta_bellii
ENSSBOG00000019860	FAM172A	70	95.985	ENSCANG00000040412	FAM172A	92	97.778	Colobus_angolensis_palliatus
ENSSBOG00000019860	FAM172A	100	97.837	ENSDNOG00000004689	FAM172A	100	97.837	Dasypus_novemcinctus
ENSSBOG00000019860	FAM172A	70	95.307	ENSDORG00000013558	Fam172a	90	95.307	Dipodomys_ordii
ENSSBOG00000019860	FAM172A	79	40.000	ENSEBUG00000016097	-	62	40.000	Eptatretus_burgeri
ENSSBOG00000019860	FAM172A	97	95.309	ENSECAG00000018274	FAM172A	98	96.748	Equus_caballus
ENSSBOG00000019860	FAM172A	100	84.856	ENSEEUG00000002887	FAM172A	100	84.856	Erinaceus_europaeus
ENSSBOG00000019860	FAM172A	98	69.268	ENSELUG00000017647	fam172a	96	69.533	Esox_lucius
ENSSBOG00000019860	FAM172A	100	98.077	ENSFCAG00000025443	FAM172A	100	98.077	Felis_catus
ENSSBOG00000019860	FAM172A	92	88.089	ENSFALG00000009072	FAM172A	95	89.577	Ficedula_albicollis
ENSSBOG00000019860	FAM172A	86	44.011	ENSFALG00000006501	-	100	44.011	Ficedula_albicollis
ENSSBOG00000019860	FAM172A	100	87.019	ENSGALG00000014661	FAM172A	97	88.614	Gallus_gallus
ENSSBOG00000019860	FAM172A	100	90.865	ENSGAGG00000003839	FAM172A	97	91.832	Gopherus_agassizii
ENSSBOG00000019860	FAM172A	84	45.609	ENSGAGG00000022828	-	93	45.609	Gopherus_agassizii
ENSSBOG00000019860	FAM172A	100	98.558	ENSGGOG00000010296	FAM172A	100	98.558	Gorilla_gorilla
ENSSBOG00000019860	FAM172A	97	94.815	ENSHGLG00000011178	FAM172A	100	97.468	Heterocephalus_glaber_female
ENSSBOG00000019860	FAM172A	94	96.757	ENSHGLG00100013340	FAM172A	100	97.468	Heterocephalus_glaber_male
ENSSBOG00000019860	FAM172A	100	97.596	ENSSTOG00000009918	FAM172A	100	97.596	Ictidomys_tridecemlineatus
ENSSBOG00000019860	FAM172A	90	47.480	ENSLACG00000001532	si:ch73-41e3.7	100	47.480	Latimeria_chalumnae
ENSSBOG00000019860	FAM172A	100	75.418	ENSLOCG00000001629	fam172a	97	77.284	Lepisosteus_oculatus
ENSSBOG00000019860	FAM172A	70	95.985	ENSMFAG00000001171	FAM172A	92	97.778	Macaca_fascicularis
ENSSBOG00000019860	FAM172A	92	98.688	ENSMNEG00000039938	FAM172A	92	97.778	Macaca_nemestrina
ENSSBOG00000019860	FAM172A	100	98.798	ENSMICG00000030403	FAM172A	100	98.798	Microcebus_murinus
ENSSBOG00000019860	FAM172A	89	94.324	ENSMOCG00000003613	Fam172a	100	94.324	Microtus_ochrogaster
ENSSBOG00000019860	FAM172A	100	90.385	ENSMODG00000020131	FAM172A	97	91.089	Monodelphis_domestica
ENSSBOG00000019860	FAM172A	89	65.405	MGP_PahariEiJ_G0015818	Fam172a	100	65.405	Mus_pahari
ENSSBOG00000019860	FAM172A	89	97.297	ENSNGAG00000019570	Fam172a	100	97.297	Nannospalax_galili
ENSSBOG00000019860	FAM172A	72	94.737	ENSNLEG00000013903	FAM172A	89	97.778	Nomascus_leucogenys
ENSSBOG00000019860	FAM172A	95	87.766	ENSOANG00000011068	FAM172A	95	91.292	Ornithorhynchus_anatinus
ENSSBOG00000019860	FAM172A	97	97.778	ENSOCUG00000007299	FAM172A	96	97.778	Oryctolagus_cuniculus
ENSSBOG00000019860	FAM172A	97	95.802	ENSOGAG00000015189	FAM172A	97	95.802	Otolemur_garnettii
ENSSBOG00000019860	FAM172A	94	97.305	ENSOARG00000016711	FAM172A	85	97.305	Ovis_aries
ENSSBOG00000019860	FAM172A	70	95.620	ENSPPAG00000030542	FAM172A	92	97.407	Pan_paniscus
ENSSBOG00000019860	FAM172A	100	98.077	ENSPPRG00000006653	FAM172A	100	98.077	Panthera_pardus
ENSSBOG00000019860	FAM172A	100	98.077	ENSPTIG00000012681	FAM172A	100	98.077	Panthera_tigris_altaica
ENSSBOG00000019860	FAM172A	70	95.620	ENSPTRG00000017074	FAM172A	92	97.407	Pan_troglodytes
ENSSBOG00000019860	FAM172A	70	95.985	ENSPANG00000011687	FAM172A	92	97.778	Papio_anubis
ENSSBOG00000019860	FAM172A	97	73.153	ENSPKIG00000012314	fam172a	96	83.516	Paramormyrops_kingsleyae
ENSSBOG00000019860	FAM172A	100	94.952	ENSPEMG00000009604	-	100	98.734	Peromyscus_maniculatus_bairdii
ENSSBOG00000019860	FAM172A	100	90.144	ENSPCIG00000028612	FAM172A	97	91.089	Phascolarctos_cinereus
ENSSBOG00000019860	FAM172A	55	97.817	ENSPCOG00000024072	FAM172A	93	97.817	Propithecus_coquereli
ENSSBOG00000019860	FAM172A	68	93.309	ENSRNOG00000013844	Fam172a	99	93.309	Rattus_norvegicus
ENSSBOG00000019860	FAM172A	53	77.130	ENSRBIG00000028680	-	80	90.608	Rhinopithecus_bieti
ENSSBOG00000019860	FAM172A	70	95.985	ENSRROG00000023807	FAM172A	92	97.778	Rhinopithecus_roxellana
ENSSBOG00000019860	FAM172A	100	89.904	ENSSHAG00000013743	FAM172A	97	90.594	Sarcophilus_harrisii
ENSSBOG00000019860	FAM172A	100	87.260	ENSSPUG00000008161	FAM172A	97	88.614	Sphenodon_punctatus
ENSSBOG00000019860	FAM172A	100	98.077	ENSSSCG00000027608	FAM172A	100	98.378	Sus_scrofa
ENSSBOG00000019860	FAM172A	80	46.429	ENSTGUG00000013623	-	100	46.429	Taeniopygia_guttata
ENSSBOG00000019860	FAM172A	91	86.842	ENSTGUG00000000715	FAM172A	100	86.842	Taeniopygia_guttata
ENSSBOG00000019860	FAM172A	83	57.273	ENSTNIG00000009902	fam172a	99	59.337	Tetraodon_nigroviridis
ENSSBOG00000019860	FAM172A	100	94.471	ENSTTRG00000001521	FAM172A	97	94.568	Tursiops_truncatus
ENSSBOG00000019860	FAM172A	100	98.558	ENSUMAG00000005442	FAM172A	100	98.558	Ursus_maritimus
ENSSBOG00000019860	FAM172A	100	97.115	ENSVVUG00000022112	FAM172A	100	97.115	Vulpes_vulpes
ENSSBOG00000019860	FAM172A	91	42.969	ENSXETG00000033027	-	99	42.969	Xenopus_tropicalis
ENSSBOG00000019860	FAM172A	98	81.951	ENSXETG00000011592	fam172a	96	82.020	Xenopus_tropicalis