EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000019884 (Gene tree)
Gene ID: 101031809
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 29189 bases
Position: chrJH378173.1:2029181-2058369
Accession: 16638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000006049	PWI	PF01480.17	4.1e-30	1	1
ENSSBOP00000005999	PWI	PF01480.17	8e-30	1	1
ENSSBOP00000006029	PWI	PF01480.17	8.1e-30	1	1
ENSSBOP00000006022	PWI	PF01480.17	8.2e-30	1	1
ENSSBOP00000005943	PWI	PF01480.17	8.7e-30	1	1
ENSSBOP00000006050	PWI	PF01480.17	5.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000022738	SRRM1-204	3097	-	ENSSBOP00000006029	811 (aa)	-	A0A2K6SF68
ENSSBOT00000022731	SRRM1-203	3139	-	ENSSBOP00000006022	825 (aa)	-	A0A2K6SF74
ENSSBOT00000022758	SRRM1-205	1509	-	ENSSBOP00000006049	502 (aa)	-	A0A2K6SF84
ENSSBOT00000022759	SRRM1-206	1078	-	ENSSBOP00000006050	79 (aa)	-	A0A2K6SF86
ENSSBOT00000022707	SRRM1-202	2442	-	ENSSBOP00000005999	813 (aa)	-	A0A2K6SF41
ENSSBOT00000022648	SRRM1-201	2700	XM_010345575	ENSSBOP00000005943	899 (aa)	XP_010343877	A0A2K6SEZ0

Gene Model

Click here to download ENSSBOG00000019884's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03013	RNA transport	KEGG
sbq03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000019884's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000019884	SRRM1	100	100.000	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSSBOG00000019884	SRRM1	99	100.000	ENSAMEG00000010075	SRRM1	100	96.933	Ailuropoda_melanoleuca
ENSSBOG00000019884	SRRM1	99	94.872	ENSACIG00000023398	-	96	61.977	Amphilophus_citrinellus
ENSSBOG00000019884	SRRM1	91	98.611	ENSAPLG00000002066	SRRM1	51	92.437	Anas_platyrhynchos
ENSSBOG00000019884	SRRM1	99	100.000	ENSANAG00000035606	SRRM1	99	98.642	Aotus_nancymaae
ENSSBOG00000019884	SRRM1	99	94.872	ENSACLG00000019786	-	94	66.000	Astatotilapia_calliptera
ENSSBOG00000019884	SRRM1	99	94.872	ENSAMXG00000040320	-	99	71.084	Astyanax_mexicanus
ENSSBOG00000019884	SRRM1	99	100.000	ENSBTAG00000013772	SRRM1	100	95.534	Bos_taurus
ENSSBOG00000019884	SRRM1	99	100.000	ENSCJAG00000020822	SRRM1	100	98.039	Callithrix_jacchus
ENSSBOG00000019884	SRRM1	99	88.889	ENSCAFG00020000003	-	99	88.889	Canis_lupus_dingo
ENSSBOG00000019884	SRRM1	99	100.000	ENSCAFG00020020948	SRRM1	99	98.509	Canis_lupus_dingo
ENSSBOG00000019884	SRRM1	99	100.000	ENSCHIG00000014656	SRRM1	100	94.137	Capra_hircus
ENSSBOG00000019884	SRRM1	96	98.684	ENSCHIG00000021159	-	54	98.684	Capra_hircus
ENSSBOG00000019884	SRRM1	99	100.000	ENSTSYG00000006782	SRRM1	100	96.714	Carlito_syrichta
ENSSBOG00000019884	SRRM1	98	94.796	ENSCAPG00000011473	SRRM1	88	94.796	Cavia_aperea
ENSSBOG00000019884	SRRM1	99	100.000	ENSCPOG00000015594	SRRM1	89	95.946	Cavia_porcellus
ENSSBOG00000019884	SRRM1	99	100.000	ENSCCAG00000029474	SRRM1	100	98.028	Cebus_capucinus
ENSSBOG00000019884	SRRM1	99	100.000	ENSCATG00000031303	SRRM1	100	96.950	Cercocebus_atys
ENSSBOG00000019884	SRRM1	99	100.000	ENSCLAG00000014592	SRRM1	100	94.880	Chinchilla_lanigera
ENSSBOG00000019884	SRRM1	72	99.155	ENSCHOG00000000027	SRRM1	73	99.155	Choloepus_hoffmanni
ENSSBOG00000019884	SRRM1	96	72.368	ENSCING00000022242	-	94	66.443	Ciona_intestinalis
ENSSBOG00000019884	SRRM1	96	77.632	ENSCSAVG00000003919	-	99	59.906	Ciona_savignyi
ENSSBOG00000019884	SRRM1	99	100.000	ENSCANG00000028271	SRRM1	100	97.371	Colobus_angolensis_palliatus
ENSSBOG00000019884	SRRM1	99	100.000	ENSCGRG00001014174	Srrm1	89	93.622	Cricetulus_griseus_chok1gshd
ENSSBOG00000019884	SRRM1	99	96.162	ENSCGRG00000017603	Srrm1	89	93.622	Cricetulus_griseus_crigri
ENSSBOG00000019884	SRRM1	99	93.590	ENSCVAG00000000504	-	67	93.590	Cyprinodon_variegatus
ENSSBOG00000019884	SRRM1	99	100.000	ENSDNOG00000049141	SRRM1	90	94.226	Dasypus_novemcinctus
ENSSBOG00000019884	SRRM1	99	100.000	ENSDORG00000028601	-	100	82.456	Dipodomys_ordii
ENSSBOG00000019884	SRRM1	99	100.000	ENSETEG00000006817	SRRM1	55	94.024	Echinops_telfairi
ENSSBOG00000019884	SRRM1	53	71.429	ENSEBUG00000002653	-	81	72.727	Eptatretus_burgeri
ENSSBOG00000019884	SRRM1	99	100.000	ENSEASG00005004270	SRRM1	100	95.306	Equus_asinus_asinus
ENSSBOG00000019884	SRRM1	99	100.000	ENSECAG00000026981	SRRM1	100	95.415	Equus_caballus
ENSSBOG00000019884	SRRM1	99	100.000	ENSEEUG00000013830	SRRM1	57	93.478	Erinaceus_europaeus
ENSSBOG00000019884	SRRM1	99	100.000	ENSFCAG00000000678	-	100	96.714	Felis_catus
ENSSBOG00000019884	SRRM1	99	83.333	ENSFCAG00000044640	-	73	83.750	Felis_catus
ENSSBOG00000019884	SRRM1	99	97.436	ENSFCAG00000034671	-	85	89.069	Felis_catus
ENSSBOG00000019884	SRRM1	90	100.000	ENSFALG00000000476	SRRM1	100	100.000	Ficedula_albicollis
ENSSBOG00000019884	SRRM1	99	100.000	ENSFDAG00000009903	SRRM1	100	95.098	Fukomys_damarensis
ENSSBOG00000019884	SRRM1	99	93.590	ENSFHEG00000007359	-	83	91.358	Fundulus_heteroclitus
ENSSBOG00000019884	SRRM1	100	100.000	ENSGALG00000001283	SRRM1	100	100.000	Gallus_gallus
ENSSBOG00000019884	SRRM1	99	94.872	ENSGAFG00000019431	-	98	62.406	Gambusia_affinis
ENSSBOG00000019884	SRRM1	99	100.000	ENSGGOG00000005209	SRRM1	100	97.590	Gorilla_gorilla
ENSSBOG00000019884	SRRM1	100	94.937	ENSHBUG00000020354	-	100	94.937	Haplochromis_burtoni
ENSSBOG00000019884	SRRM1	99	100.000	ENSHGLG00000017105	SRRM1	100	95.202	Heterocephalus_glaber_female
ENSSBOG00000019884	SRRM1	99	97.006	ENSHGLG00100016772	SRRM1	88	97.362	Heterocephalus_glaber_male
ENSSBOG00000019884	SRRM1	99	84.615	ENSHGLG00100017918	-	100	90.299	Heterocephalus_glaber_male
ENSSBOG00000019884	SRRM1	99	79.487	ENSHGLG00100010430	-	99	78.750	Heterocephalus_glaber_male
ENSSBOG00000019884	SRRM1	99	100.000	ENSSTOG00000014640	SRRM1	100	96.187	Ictidomys_tridecemlineatus
ENSSBOG00000019884	SRRM1	99	95.494	ENSJJAG00000018643	Srrm1	89	95.494	Jaculus_jaculus
ENSSBOG00000019884	SRRM1	100	93.671	ENSKMAG00000013810	-	88	93.671	Kryptolebias_marmoratus
ENSSBOG00000019884	SRRM1	99	100.000	ENSLAFG00000013830	SRRM1	100	92.895	Loxodonta_africana
ENSSBOG00000019884	SRRM1	99	100.000	ENSMFAG00000025726	SRRM1	100	96.950	Macaca_fascicularis
ENSSBOG00000019884	SRRM1	83	77.650	ENSMFAG00000038841	-	54	76.485	Macaca_fascicularis
ENSSBOG00000019884	SRRM1	99	100.000	ENSMMUG00000006645	SRRM1	99	97.181	Macaca_mulatta
ENSSBOG00000019884	SRRM1	99	100.000	ENSMNEG00000039415	SRRM1	100	96.841	Macaca_nemestrina
ENSSBOG00000019884	SRRM1	99	100.000	ENSMLEG00000038030	-	100	91.347	Mandrillus_leucophaeus
ENSSBOG00000019884	SRRM1	99	94.872	ENSMZEG00005006344	-	94	66.400	Maylandia_zebra
ENSSBOG00000019884	SRRM1	99	100.000	ENSMAUG00000015705	Srrm1	89	94.161	Mesocricetus_auratus
ENSSBOG00000019884	SRRM1	99	100.000	ENSMICG00000006553	SRRM1	100	96.078	Microcebus_murinus
ENSSBOG00000019884	SRRM1	99	94.872	ENSMMOG00000002390	-	77	94.872	Mola_mola
ENSSBOG00000019884	SRRM1	99	100.000	ENSMODG00000013861	SRRM1	56	94.821	Monodelphis_domestica
ENSSBOG00000019884	SRRM1	99	73.171	ENSMALG00000010813	-	83	63.677	Monopterus_albus
ENSSBOG00000019884	SRRM1	99	100.000	MGP_CAROLIEiJ_G0026636	Srrm1	91	95.981	Mus_caroli
ENSSBOG00000019884	SRRM1	99	100.000	ENSMUSG00000028809	Srrm1	91	95.859	Mus_musculus
ENSSBOG00000019884	SRRM1	99	100.000	MGP_PahariEiJ_G0028969	Srrm1	91	96.098	Mus_pahari
ENSSBOG00000019884	SRRM1	99	100.000	MGP_SPRETEiJ_G0027616	Srrm1	91	96.102	Mus_spretus
ENSSBOG00000019884	SRRM1	99	98.718	ENSMPUG00000000018	-	75	98.780	Mustela_putorius_furo
ENSSBOG00000019884	SRRM1	99	100.000	ENSMPUG00000015831	-	99	87.552	Mustela_putorius_furo
ENSSBOG00000019884	SRRM1	99	100.000	ENSMLUG00000006246	SRRM1	89	96.573	Myotis_lucifugus
ENSSBOG00000019884	SRRM1	99	100.000	ENSNGAG00000014562	Srrm1	89	95.981	Nannospalax_galili
ENSSBOG00000019884	SRRM1	99	94.872	ENSNBRG00000010911	-	67	87.730	Neolamprologus_brichardi
ENSSBOG00000019884	SRRM1	99	100.000	ENSNLEG00000008966	SRRM1	100	97.700	Nomascus_leucogenys
ENSSBOG00000019884	SRRM1	76	83.636	ENSMEUG00000014704	SRRM1	57	88.679	Notamacropus_eugenii
ENSSBOG00000019884	SRRM1	99	89.744	ENSODEG00000002361	-	100	89.744	Octodon_degus
ENSSBOG00000019884	SRRM1	96	93.421	ENSODEG00000007221	-	99	93.421	Octodon_degus
ENSSBOG00000019884	SRRM1	99	96.154	ENSODEG00000019473	-	100	96.154	Octodon_degus
ENSSBOG00000019884	SRRM1	99	100.000	ENSOCUG00000008438	SRRM1	100	95.524	Oryctolagus_cuniculus
ENSSBOG00000019884	SRRM1	99	94.872	ENSORLG00000017510	-	68	87.117	Oryzias_latipes
ENSSBOG00000019884	SRRM1	100	94.937	ENSORLG00020018419	-	100	94.937	Oryzias_latipes_hni
ENSSBOG00000019884	SRRM1	99	100.000	ENSOGAG00000010210	SRRM1	100	95.425	Otolemur_garnettii
ENSSBOG00000019884	SRRM1	99	100.000	ENSOARG00000006453	SRRM1	99	96.816	Ovis_aries
ENSSBOG00000019884	SRRM1	99	100.000	ENSPPAG00000043918	SRRM1	100	97.590	Pan_paniscus
ENSSBOG00000019884	SRRM1	99	100.000	ENSPPRG00000002509	SRRM1	100	96.714	Panthera_pardus
ENSSBOG00000019884	SRRM1	90	88.732	ENSPTIG00000022093	-	74	87.261	Panthera_tigris_altaica
ENSSBOG00000019884	SRRM1	99	92.279	ENSPTIG00000008778	-	88	92.279	Panthera_tigris_altaica
ENSSBOG00000019884	SRRM1	99	100.000	ENSPTRG00000000349	SRRM1	100	97.168	Pan_troglodytes
ENSSBOG00000019884	SRRM1	99	100.000	ENSPANG00000010194	SRRM1	99	97.304	Papio_anubis
ENSSBOG00000019884	SRRM1	59	82.979	ENSPANG00000035568	-	54	72.973	Papio_anubis
ENSSBOG00000019884	SRRM1	100	91.139	ENSPMGG00000009036	-	73	92.308	Periophthalmus_magnuspinnatus
ENSSBOG00000019884	SRRM1	99	100.000	ENSPEMG00000006254	Srrm1	89	96.098	Peromyscus_maniculatus_bairdii
ENSSBOG00000019884	SRRM1	99	98.718	ENSPCIG00000009214	SRRM1	55	94.223	Phascolarctos_cinereus
ENSSBOG00000019884	SRRM1	100	94.937	ENSPMEG00000002615	-	100	94.937	Poecilia_mexicana
ENSSBOG00000019884	SRRM1	100	94.937	ENSPMEG00000011776	-	100	94.937	Poecilia_mexicana
ENSSBOG00000019884	SRRM1	99	100.000	ENSPPYG00000001716	SRRM1	100	97.374	Pongo_abelii
ENSSBOG00000019884	SRRM1	51	100.000	ENSPCAG00000015138	SRRM1	52	100.000	Procavia_capensis
ENSSBOG00000019884	SRRM1	99	100.000	ENSPCOG00000021311	SRRM1	100	96.499	Propithecus_coquereli
ENSSBOG00000019884	SRRM1	99	100.000	ENSPVAG00000005836	SRRM1	100	96.714	Pteropus_vampyrus
ENSSBOG00000019884	SRRM1	99	94.872	ENSPNYG00000005058	-	94	66.400	Pundamilia_nyererei
ENSSBOG00000019884	SRRM1	99	93.590	ENSPNAG00000005888	-	75	93.590	Pygocentrus_nattereri
ENSSBOG00000019884	SRRM1	99	100.000	ENSRNOG00000018194	Srrm1	90	95.854	Rattus_norvegicus
ENSSBOG00000019884	SRRM1	99	100.000	ENSRBIG00000035461	SRRM1	99	91.898	Rhinopithecus_bieti
ENSSBOG00000019884	SRRM1	99	100.000	ENSRROG00000035151	SRRM1	100	97.371	Rhinopithecus_roxellana
ENSSBOG00000019884	SRRM1	70	81.818	ENSRROG00000041543	-	52	71.020	Rhinopithecus_roxellana
ENSSBOG00000019884	SRRM1	92	95.248	ENSSHAG00000011061	SRRM1	51	95.248	Sarcophilus_harrisii
ENSSBOG00000019884	SRRM1	99	93.590	ENSSMAG00000009318	-	58	92.647	Scophthalmus_maximus
ENSSBOG00000019884	SRRM1	67	98.113	ENSSARG00000013718	SRRM1	60	90.164	Sorex_araneus
ENSSBOG00000019884	SRRM1	99	97.796	ENSSSCG00000032947	SRRM1	100	95.791	Sus_scrofa
ENSSBOG00000019884	SRRM1	91	98.611	ENSTGUG00000016669	-	99	100.000	Taeniopygia_guttata
ENSSBOG00000019884	SRRM1	99	100.000	ENSTBEG00000000100	SRRM1	100	96.276	Tupaia_belangeri
ENSSBOG00000019884	SRRM1	99	97.576	ENSTTRG00000009365	SRRM1	100	96.026	Tursiops_truncatus
ENSSBOG00000019884	SRRM1	100	98.734	ENSUAMG00000011740	-	87	100.000	Ursus_americanus
ENSSBOG00000019884	SRRM1	94	98.950	ENSUMAG00000013121	SRRM1	90	98.950	Ursus_maritimus
ENSSBOG00000019884	SRRM1	96	94.299	ENSVPAG00000007698	SRRM1	100	94.299	Vicugna_pacos
ENSSBOG00000019884	SRRM1	99	100.000	ENSVVUG00000026966	SRRM1	100	90.929	Vulpes_vulpes