EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000020026 (Gene tree)
Gene ID: 101052436
Gene Symbol: SNRNP70
Alias: RNPU1Z|RPU1|SNRP70|Snp1|U1-70K
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 26015 bases
Position: chrJH378232.1:4226281-4252295
Accession: 11150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000006241	RRM_1	PF00076.22	8.1e-18	1	1
ENSSBOP00000006275	RRM_1	PF00076.22	1.8e-13	1	1
ENSSBOP00000006264	RRM_1	PF00076.22	1.2e-11	1	1
ENSSBOP00000006275	U1snRNP70_N	PF12220.8	1.1e-28	1	1
ENSSBOP00000006264	U1snRNP70_N	PF12220.8	9.7e-28	1	1
ENSSBOP00000006241	U1snRNP70_N	PF12220.8	1.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000022984	SNRNP70-202	1044	-	ENSSBOP00000006264	347 (aa)	-	A0A2K6SFW8
ENSSBOT00000022958	SNRNP70-201	6560	XM_010351050	ENSSBOP00000006241	438 (aa)	XP_010349352	A0A2K6SFS1
ENSSBOT00000022995	SNRNP70-203	501	-	ENSSBOP00000006275	166 (aa)	-	A0A2K6SFV7

Gene Model

Click here to download ENSSBOG00000020026's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000020026's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000020026	SNRNP70	100	100.000	ENSG00000104852	SNRNP70	100	100.000	Homo_sapiens
ENSSBOG00000020026	SNRNP70	86	88.028	ENSAPOG00000009322	snrnp70	89	88.028	Acanthochromis_polyacanthus
ENSSBOG00000020026	SNRNP70	99	97.561	ENSAMEG00000014468	SNRNP70	100	92.744	Ailuropoda_melanoleuca
ENSSBOG00000020026	SNRNP70	99	89.634	ENSAOCG00000011672	snrnp70	50	83.482	Amphiprion_ocellaris
ENSSBOG00000020026	SNRNP70	99	93.902	ENSACAG00000013276	SNRNP70	51	97.297	Anolis_carolinensis
ENSSBOG00000020026	SNRNP70	100	100.000	ENSANAG00000036787	SNRNP70	100	100.000	Aotus_nancymaae
ENSSBOG00000020026	SNRNP70	100	100.000	ENSBTAG00000048800	-	100	100.000	Bos_taurus
ENSSBOG00000020026	SNRNP70	99	50.303	WBGene00004390	rnp-7	56	53.723	Caenorhabditis_elegans
ENSSBOG00000020026	SNRNP70	100	100.000	ENSCJAG00000000193	SNRNP70	100	100.000	Callithrix_jacchus
ENSSBOG00000020026	SNRNP70	100	100.000	ENSCAFG00000003711	SNRNP70	100	100.000	Canis_familiaris
ENSSBOG00000020026	SNRNP70	100	96.388	ENSCAFG00020025470	SNRNP70	100	96.388	Canis_lupus_dingo
ENSSBOG00000020026	SNRNP70	100	100.000	ENSCHIG00000018534	-	100	100.000	Capra_hircus
ENSSBOG00000020026	SNRNP70	63	88.571	ENSTSYG00000032350	-	85	88.571	Carlito_syrichta
ENSSBOG00000020026	SNRNP70	100	97.059	ENSCPOG00000019589	SNRNP70	100	97.059	Cavia_porcellus
ENSSBOG00000020026	SNRNP70	89	100.000	ENSCCAG00000036551	SNRNP70	100	100.000	Cebus_capucinus
ENSSBOG00000020026	SNRNP70	100	99.543	ENSCATG00000016149	SNRNP70	100	99.543	Cercocebus_atys
ENSSBOG00000020026	SNRNP70	100	98.178	ENSCLAG00000007991	SNRNP70	100	98.178	Chinchilla_lanigera
ENSSBOG00000020026	SNRNP70	100	97.959	ENSCSAG00000002759	SNRNP70	100	97.489	Chlorocebus_sabaeus
ENSSBOG00000020026	SNRNP70	99	96.341	ENSCPBG00000014841	SNRNP70	51	99.099	Chrysemys_picta_bellii
ENSSBOG00000020026	SNRNP70	96	66.875	ENSCSAVG00000010109	-	50	70.681	Ciona_savignyi
ENSSBOG00000020026	SNRNP70	100	99.317	ENSCANG00000036607	SNRNP70	100	99.317	Colobus_angolensis_palliatus
ENSSBOG00000020026	SNRNP70	99	97.561	ENSCGRG00001020676	Snrnp70	100	95.749	Cricetulus_griseus_chok1gshd
ENSSBOG00000020026	SNRNP70	99	97.561	ENSCGRG00000018048	Snrnp70	100	95.749	Cricetulus_griseus_crigri
ENSSBOG00000020026	SNRNP70	99	88.415	ENSCSEG00000011978	snrnp70	99	91.480	Cynoglossus_semilaevis
ENSSBOG00000020026	SNRNP70	96	89.937	ENSCVAG00000003912	snrnp70	99	89.937	Cyprinodon_variegatus
ENSSBOG00000020026	SNRNP70	99	86.585	ENSDARG00000077126	snrnp70	99	88.820	Danio_rerio
ENSSBOG00000020026	SNRNP70	100	100.000	ENSDNOG00000035849	-	100	100.000	Dasypus_novemcinctus
ENSSBOG00000020026	SNRNP70	99	97.561	ENSDORG00000010228	Snrnp70	100	95.946	Dipodomys_ordii
ENSSBOG00000020026	SNRNP70	74	100.000	ENSETEG00000005009	SNRNP70	74	100.000	Echinops_telfairi
ENSSBOG00000020026	SNRNP70	100	97.955	ENSEASG00005004917	SNRNP70	100	97.955	Equus_asinus_asinus
ENSSBOG00000020026	SNRNP70	100	100.000	ENSECAG00000013936	-	100	100.000	Equus_caballus
ENSSBOG00000020026	SNRNP70	100	83.144	ENSEEUG00000005666	SNRNP70	100	82.232	Erinaceus_europaeus
ENSSBOG00000020026	SNRNP70	99	97.561	ENSFCAG00000042603	SNRNP70	100	91.591	Felis_catus
ENSSBOG00000020026	SNRNP70	99	97.561	ENSFDAG00000013830	SNRNP70	96	99.682	Fukomys_damarensis
ENSSBOG00000020026	SNRNP70	99	87.805	ENSGMOG00000011492	snrnp70	97	91.403	Gadus_morhua
ENSSBOG00000020026	SNRNP70	99	88.415	ENSGACG00000000448	snrnp70	70	91.928	Gasterosteus_aculeatus
ENSSBOG00000020026	SNRNP70	96	80.000	ENSGAGG00000012628	SNRNP70	99	80.000	Gopherus_agassizii
ENSSBOG00000020026	SNRNP70	100	100.000	ENSGGOG00000008245	SNRNP70	100	100.000	Gorilla_gorilla
ENSSBOG00000020026	SNRNP70	100	100.000	ENSHGLG00100001651	-	100	100.000	Heterocephalus_glaber_male
ENSSBOG00000020026	SNRNP70	100	100.000	ENSSTOG00000013988	-	100	100.000	Ictidomys_tridecemlineatus
ENSSBOG00000020026	SNRNP70	99	97.561	ENSJJAG00000002614	Snrnp70	100	93.049	Jaculus_jaculus
ENSSBOG00000020026	SNRNP70	99	97.561	ENSLAFG00000028536	SNRNP70	100	100.000	Loxodonta_africana
ENSSBOG00000020026	SNRNP70	100	99.543	ENSMFAG00000039824	SNRNP70	100	99.543	Macaca_fascicularis
ENSSBOG00000020026	SNRNP70	100	100.000	ENSMMUG00000004928	SNRNP70	100	100.000	Macaca_mulatta
ENSSBOG00000020026	SNRNP70	100	99.424	ENSMNEG00000038057	SNRNP70	100	99.424	Macaca_nemestrina
ENSSBOG00000020026	SNRNP70	100	99.543	ENSMLEG00000030967	SNRNP70	100	99.543	Mandrillus_leucophaeus
ENSSBOG00000020026	SNRNP70	99	97.561	ENSMAUG00000020970	Snrnp70	100	95.964	Mesocricetus_auratus
ENSSBOG00000020026	SNRNP70	100	100.000	ENSMICG00000038437	SNRNP70	100	100.000	Microcebus_murinus
ENSSBOG00000020026	SNRNP70	99	97.561	ENSMOCG00000012825	Snrnp70	100	95.100	Microtus_ochrogaster
ENSSBOG00000020026	SNRNP70	75	77.576	ENSMODG00000023381	SNRNP70	100	80.000	Monodelphis_domestica
ENSSBOG00000020026	SNRNP70	99	97.561	MGP_CAROLIEiJ_G0029714	Snrnp70	100	100.000	Mus_caroli
ENSSBOG00000020026	SNRNP70	99	97.561	ENSMUSG00000063511	Snrnp70	100	100.000	Mus_musculus
ENSSBOG00000020026	SNRNP70	99	97.561	MGP_PahariEiJ_G0012939	Snrnp70	100	100.000	Mus_pahari
ENSSBOG00000020026	SNRNP70	99	97.561	MGP_SPRETEiJ_G0030812	Snrnp70	100	100.000	Mus_spretus
ENSSBOG00000020026	SNRNP70	100	98.182	ENSMPUG00000003258	SNRNP70	100	98.182	Mustela_putorius_furo
ENSSBOG00000020026	SNRNP70	100	98.182	ENSMLUG00000011766	SNRNP70	100	98.182	Myotis_lucifugus
ENSSBOG00000020026	SNRNP70	99	97.561	ENSNGAG00000021191	Snrnp70	100	94.444	Nannospalax_galili
ENSSBOG00000020026	SNRNP70	99	89.024	ENSNBRG00000003126	snrnp70	96	92.377	Neolamprologus_brichardi
ENSSBOG00000020026	SNRNP70	99	99.537	ENSNLEG00000004899	SNRNP70	100	99.537	Nomascus_leucogenys
ENSSBOG00000020026	SNRNP70	80	83.954	ENSMEUG00000015650	SNRNP70	55	98.438	Notamacropus_eugenii
ENSSBOG00000020026	SNRNP70	99	97.561	ENSODEG00000017499	SNRNP70	100	93.290	Octodon_degus
ENSSBOG00000020026	SNRNP70	99	88.415	ENSONIG00000007822	snrnp70	52	91.928	Oreochromis_niloticus
ENSSBOG00000020026	SNRNP70	99	96.951	ENSOANG00000005213	SNRNP70	97	99.550	Ornithorhynchus_anatinus
ENSSBOG00000020026	SNRNP70	99	97.561	ENSOCUG00000015081	SNRNP70	81	92.954	Oryctolagus_cuniculus
ENSSBOG00000020026	SNRNP70	100	97.511	ENSOGAG00000029310	SNRNP70	100	97.511	Otolemur_garnettii
ENSSBOG00000020026	SNRNP70	99	97.561	ENSOARG00000012608	SNRNP70	93	100.000	Ovis_aries
ENSSBOG00000020026	SNRNP70	100	100.000	ENSPPAG00000035067	SNRNP70	100	100.000	Pan_paniscus
ENSSBOG00000020026	SNRNP70	100	98.182	ENSPPRG00000005579	SNRNP70	100	98.182	Panthera_pardus
ENSSBOG00000020026	SNRNP70	100	100.000	ENSPTRG00000011277	SNRNP70	100	100.000	Pan_troglodytes
ENSSBOG00000020026	SNRNP70	100	99.543	ENSPANG00000004068	SNRNP70	100	99.543	Papio_anubis
ENSSBOG00000020026	SNRNP70	96	80.503	ENSPKIG00000019992	snrnp70	86	79.012	Paramormyrops_kingsleyae
ENSSBOG00000020026	SNRNP70	98	96.296	ENSPSIG00000015251	SNRNP70	90	85.217	Pelodiscus_sinensis
ENSSBOG00000020026	SNRNP70	96	90.566	ENSPMGG00000010153	snrnp70	77	90.062	Periophthalmus_magnuspinnatus
ENSSBOG00000020026	SNRNP70	99	97.561	ENSPEMG00000019011	Snrnp70	100	95.111	Peromyscus_maniculatus_bairdii
ENSSBOG00000020026	SNRNP70	99	79.878	ENSPMAG00000008502	snrnp70	97	83.422	Petromyzon_marinus
ENSSBOG00000020026	SNRNP70	99	97.561	ENSPCIG00000007296	SNRNP70	65	100.000	Phascolarctos_cinereus
ENSSBOG00000020026	SNRNP70	100	99.087	ENSPPYG00000010234	SNRNP70	100	99.087	Pongo_abelii
ENSSBOG00000020026	SNRNP70	100	93.103	ENSPCOG00000023103	SNRNP70	100	90.787	Propithecus_coquereli
ENSSBOG00000020026	SNRNP70	100	94.545	ENSPVAG00000009578	SNRNP70	100	92.727	Pteropus_vampyrus
ENSSBOG00000020026	SNRNP70	100	99.315	ENSRBIG00000042387	SNRNP70	100	99.315	Rhinopithecus_bieti
ENSSBOG00000020026	SNRNP70	100	99.543	ENSRROG00000033636	SNRNP70	100	99.543	Rhinopithecus_roxellana
ENSSBOG00000020026	SNRNP70	99	97.561	ENSSHAG00000002194	SNRNP70	65	100.000	Sarcophilus_harrisii
ENSSBOG00000020026	SNRNP70	100	94.578	ENSSPUG00000016621	SNRNP70	52	98.649	Sphenodon_punctatus
ENSSBOG00000020026	SNRNP70	100	100.000	ENSSSCG00000023792	-	100	100.000	Sus_scrofa
ENSSBOG00000020026	SNRNP70	66	90.000	ENSTNIG00000014186	-	99	90.000	Tetraodon_nigroviridis
ENSSBOG00000020026	SNRNP70	100	97.506	ENSTTRG00000017099	SNRNP70	100	97.506	Tursiops_truncatus
ENSSBOG00000020026	SNRNP70	100	98.182	ENSUAMG00000016147	SNRNP70	100	98.182	Ursus_americanus
ENSSBOG00000020026	SNRNP70	100	100.000	ENSUMAG00000001467	SNRNP70	100	100.000	Ursus_maritimus
ENSSBOG00000020026	SNRNP70	79	99.237	ENSVPAG00000005959	-	100	80.995	Vicugna_pacos
ENSSBOG00000020026	SNRNP70	100	100.000	ENSVVUG00000022976	SNRNP70	100	100.000	Vulpes_vulpes