EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000020112 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 1018 bases
Position: chrJH378139.1:14327931-14328948
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000006309	SMN	PF06003.12	9.5e-80	1	2
ENSSBOP00000006309	SMN	PF06003.12	9.5e-80	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000023032	-	1018	XM_010340318	ENSSBOP00000006309	287 (aa)	XP_010338620	A0A2K6SG17

Gene Model

Click here to download ENSSBOG00000020112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000020112's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000020112	-	87	90.800	ENSSBOG00000011665	-	77	98.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000020112	-	87	86.400	ENSG00000172062	SMN1	86	86.000	Homo_sapiens
ENSSBOG00000020112	-	87	86.400	ENSG00000205571	SMN2	86	86.000	Homo_sapiens
ENSSBOG00000020112	-	87	45.669	ENSAPOG00000011324	smn1	55	55.280	Acanthochromis_polyacanthus
ENSSBOG00000020112	-	87	80.080	ENSAMEG00000003316	-	80	79.681	Ailuropoda_melanoleuca
ENSSBOG00000020112	-	54	55.844	ENSACIG00000019772	-	57	55.844	Amphilophus_citrinellus
ENSSBOG00000020112	-	87	45.200	ENSAOCG00000024444	smn1	56	55.280	Amphiprion_ocellaris
ENSSBOG00000020112	-	87	45.600	ENSAPEG00000016504	smn1	57	55.280	Amphiprion_percula
ENSSBOG00000020112	-	66	49.206	ENSAPLG00000010912	-	53	52.336	Anas_platyrhynchos
ENSSBOG00000020112	-	87	54.545	ENSACAG00000010017	-	83	53.755	Anolis_carolinensis
ENSSBOG00000020112	-	87	90.800	ENSANAG00000032133	-	83	92.400	Aotus_nancymaae
ENSSBOG00000020112	-	52	60.667	ENSACLG00000007308	smn1	60	54.802	Astatotilapia_calliptera
ENSSBOG00000020112	-	91	73.764	ENSBTAG00000005743	SMN2	84	76.096	Bos_taurus
ENSSBOG00000020112	-	87	90.400	ENSCJAG00000016290	-	84	92.000	Callithrix_jacchus
ENSSBOG00000020112	-	87	79.283	ENSCAFG00000007812	SMN	84	78.884	Canis_familiaris
ENSSBOG00000020112	-	87	79.283	ENSCAFG00020019229	-	78	78.884	Canis_lupus_dingo
ENSSBOG00000020112	-	94	72.794	ENSCHIG00000015559	-	82	77.291	Capra_hircus
ENSSBOG00000020112	-	87	81.600	ENSTSYG00000012058	-	79	89.231	Carlito_syrichta
ENSSBOG00000020112	-	75	65.438	ENSCAPG00000011021	-	92	64.220	Cavia_aperea
ENSSBOG00000020112	-	87	72.222	ENSCPOG00000036973	-	83	75.397	Cavia_porcellus
ENSSBOG00000020112	-	87	71.206	ENSCPOG00000012328	-	84	74.319	Cavia_porcellus
ENSSBOG00000020112	-	87	89.600	ENSCCAG00000018127	-	83	91.600	Cebus_capucinus
ENSSBOG00000020112	-	87	85.600	ENSCATG00000037002	-	78	92.308	Cercocebus_atys
ENSSBOG00000020112	-	87	73.047	ENSCLAG00000000284	-	83	72.656	Chinchilla_lanigera
ENSSBOG00000020112	-	87	86.000	ENSCSAG00000015688	-	83	84.252	Chlorocebus_sabaeus
ENSSBOG00000020112	-	87	68.400	ENSCHOG00000007346	-	67	79.762	Choloepus_hoffmanni
ENSSBOG00000020112	-	87	59.684	ENSCPBG00000010968	-	89	58.730	Chrysemys_picta_bellii
ENSSBOG00000020112	-	87	81.673	ENSCANG00000033324	-	83	77.689	Colobus_angolensis_palliatus
ENSSBOG00000020112	-	87	86.000	ENSCANG00000038242	-	87	85.600	Colobus_angolensis_palliatus
ENSSBOG00000020112	-	72	64.251	ENSCGRG00001016998	-	77	65.534	Cricetulus_griseus_chok1gshd
ENSSBOG00000020112	-	87	76.400	ENSCGRG00001017959	-	84	76.000	Cricetulus_griseus_chok1gshd
ENSSBOG00000020112	-	87	76.400	ENSCGRG00000007698	Smn1	84	76.000	Cricetulus_griseus_crigri
ENSSBOG00000020112	-	87	47.710	ENSCSEG00000015227	smn1	55	55.280	Cynoglossus_semilaevis
ENSSBOG00000020112	-	87	43.600	ENSCVAG00000007498	smn1	55	52.795	Cyprinodon_variegatus
ENSSBOG00000020112	-	90	46.899	ENSDARG00000018494	smn1	58	52.071	Danio_rerio
ENSSBOG00000020112	-	78	77.434	ENSDNOG00000007283	-	90	76.991	Dasypus_novemcinctus
ENSSBOG00000020112	-	66	67.895	ENSDNOG00000045949	-	80	67.895	Dasypus_novemcinctus
ENSSBOG00000020112	-	85	70.902	ENSDORG00000007082	Smn1	81	76.106	Dipodomys_ordii
ENSSBOG00000020112	-	64	65.217	ENSETEG00000001406	-	82	64.497	Echinops_telfairi
ENSSBOG00000020112	-	88	38.768	ENSEBUG00000011902	smn1	51	45.578	Eptatretus_burgeri
ENSSBOG00000020112	-	87	74.800	ENSEASG00005018000	-	85	74.800	Equus_asinus_asinus
ENSSBOG00000020112	-	87	78.884	ENSECAG00000015215	-	84	78.486	Equus_caballus
ENSSBOG00000020112	-	87	74.400	ENSEEUG00000015777	-	96	74.400	Erinaceus_europaeus
ENSSBOG00000020112	-	87	47.510	ENSELUG00000018067	smn1	56	54.321	Esox_lucius
ENSSBOG00000020112	-	87	81.275	ENSFCAG00000028292	SMN	84	80.876	Felis_catus
ENSSBOG00000020112	-	87	55.731	ENSFALG00000012320	-	85	55.336	Ficedula_albicollis
ENSSBOG00000020112	-	87	70.312	ENSFDAG00000017683	-	83	71.484	Fukomys_damarensis
ENSSBOG00000020112	-	60	53.216	ENSFHEG00000018508	smn1	54	56.376	Fundulus_heteroclitus
ENSSBOG00000020112	-	52	52.667	ENSGMOG00000017279	smn1	53	52.667	Gadus_morhua
ENSSBOG00000020112	-	87	53.360	ENSGALG00000002430	SMN	89	50.202	Gallus_gallus
ENSSBOG00000020112	-	87	46.800	ENSGAFG00000009501	smn1	56	57.333	Gambusia_affinis
ENSSBOG00000020112	-	65	53.158	ENSGACG00000010584	smn1	52	58.667	Gasterosteus_aculeatus
ENSSBOG00000020112	-	74	36.667	ENSGAGG00000013639	-	54	50.000	Gopherus_agassizii
ENSSBOG00000020112	-	59	64.327	ENSGAGG00000011374	-	84	58.498	Gopherus_agassizii
ENSSBOG00000020112	-	59	89.286	ENSGGOG00000026704	-	79	89.286	Gorilla_gorilla
ENSSBOG00000020112	-	59	89.286	ENSGGOG00000003872	-	86	72.800	Gorilla_gorilla
ENSSBOG00000020112	-	52	60.667	ENSHBUG00000013987	smn1	62	54.802	Haplochromis_burtoni
ENSSBOG00000020112	-	87	71.484	ENSHGLG00000001018	-	83	72.656	Heterocephalus_glaber_female
ENSSBOG00000020112	-	87	72.800	ENSHGLG00000001905	-	84	72.800	Heterocephalus_glaber_female
ENSSBOG00000020112	-	87	72.400	ENSHGLG00100018676	-	88	72.400	Heterocephalus_glaber_male
ENSSBOG00000020112	-	87	71.484	ENSHGLG00100011252	-	83	72.656	Heterocephalus_glaber_male
ENSSBOG00000020112	-	92	43.657	ENSHCOG00000017136	smn1	56	49.398	Hippocampus_comes
ENSSBOG00000020112	-	87	46.400	ENSIPUG00000012580	smn1	52	50.296	Ictalurus_punctatus
ENSSBOG00000020112	-	87	81.673	ENSSTOG00000012288	-	87	81.275	Ictidomys_tridecemlineatus
ENSSBOG00000020112	-	58	56.548	ENSJJAG00000014853	-	85	59.763	Jaculus_jaculus
ENSSBOG00000020112	-	87	47.200	ENSLBEG00000022550	smn1	52	57.241	Labrus_bergylta
ENSSBOG00000020112	-	87	45.635	ENSLOCG00000011339	smn1	62	54.545	Lepisosteus_oculatus
ENSSBOG00000020112	-	87	76.471	ENSLAFG00000003425	-	81	76.078	Loxodonta_africana
ENSSBOG00000020112	-	94	81.784	ENSMFAG00000031523	SMN1	89	83.658	Macaca_fascicularis
ENSSBOG00000020112	-	87	83.600	ENSMFAG00000008812	-	83	83.200	Macaca_fascicularis
ENSSBOG00000020112	-	87	86.800	ENSMMUG00000020214	SMN1	78	93.846	Macaca_mulatta
ENSSBOG00000020112	-	87	82.800	ENSMMUG00000030594	-	83	82.400	Macaca_mulatta
ENSSBOG00000020112	-	87	86.800	ENSMNEG00000035094	-	78	93.846	Macaca_nemestrina
ENSSBOG00000020112	-	71	73.659	ENSMNEG00000036423	-	77	73.171	Macaca_nemestrina
ENSSBOG00000020112	-	87	86.400	ENSMLEG00000041902	-	78	93.846	Mandrillus_leucophaeus
ENSSBOG00000020112	-	60	54.651	ENSMAMG00000011034	smn1	55	56.522	Mastacembelus_armatus
ENSSBOG00000020112	-	52	60.667	ENSMZEG00005013634	smn1	62	54.802	Maylandia_zebra
ENSSBOG00000020112	-	66	49.206	ENSMGAG00000008889	-	86	46.561	Meleagris_gallopavo
ENSSBOG00000020112	-	87	75.200	ENSMAUG00000010262	Smn1	84	75.600	Mesocricetus_auratus
ENSSBOG00000020112	-	78	81.614	ENSMICG00000034708	-	75	86.310	Microcebus_murinus
ENSSBOG00000020112	-	87	74.400	ENSMOCG00000017833	Smn1	84	74.000	Microtus_ochrogaster
ENSSBOG00000020112	-	52	56.667	ENSMMOG00000005504	smn1	54	56.667	Mola_mola
ENSSBOG00000020112	-	94	60.073	ENSMODG00000001436	-	83	64.822	Monodelphis_domestica
ENSSBOG00000020112	-	60	51.124	ENSMALG00000008025	smn1	51	58.000	Monopterus_albus
ENSSBOG00000020112	-	87	75.299	MGP_CAROLIEiJ_G0018836	Smn1	84	76.000	Mus_caroli
ENSSBOG00000020112	-	87	74.800	ENSMUSG00000021645	Smn1	84	75.600	Mus_musculus
ENSSBOG00000020112	-	93	68.284	MGP_PahariEiJ_G0015911	Smn1	84	71.600	Mus_pahari
ENSSBOG00000020112	-	87	74.502	MGP_SPRETEiJ_G0019718	Smn1	84	75.200	Mus_spretus
ENSSBOG00000020112	-	87	81.349	ENSMPUG00000014470	-	86	80.952	Mustela_putorius_furo
ENSSBOG00000020112	-	87	84.064	ENSMLUG00000010603	-	80	83.665	Myotis_lucifugus
ENSSBOG00000020112	-	93	72.119	ENSNGAG00000019833	Smn1	84	76.096	Nannospalax_galili
ENSSBOG00000020112	-	52	61.333	ENSNBRG00000023000	smn1	61	55.367	Neolamprologus_brichardi
ENSSBOG00000020112	-	87	86.400	ENSNLEG00000004454	-	86	86.000	Nomascus_leucogenys
ENSSBOG00000020112	-	78	58.850	ENSMEUG00000011393	-	95	59.912	Notamacropus_eugenii
ENSSBOG00000020112	-	87	73.307	ENSOPRG00000002015	-	96	73.705	Ochotona_princeps
ENSSBOG00000020112	-	91	72.659	ENSODEG00000015976	-	85	74.609	Octodon_degus
ENSSBOG00000020112	-	52	60.667	ENSONIG00000011799	smn1	61	54.802	Oreochromis_niloticus
ENSSBOG00000020112	-	87	60.870	ENSOANG00000001626	-	85	61.265	Ornithorhynchus_anatinus
ENSSBOG00000020112	-	87	71.875	ENSOCUG00000026649	-	83	74.609	Oryctolagus_cuniculus
ENSSBOG00000020112	-	87	76.494	ENSOCUG00000017097	-	82	76.494	Oryctolagus_cuniculus
ENSSBOG00000020112	-	79	78.855	ENSOCUG00000025183	-	82	77.533	Oryctolagus_cuniculus
ENSSBOG00000020112	-	52	56.410	ENSORLG00000010552	smn1	52	56.000	Oryzias_latipes
ENSSBOG00000020112	-	87	47.266	ENSORLG00020007936	smn1	57	58.667	Oryzias_latipes_hni
ENSSBOG00000020112	-	52	54.487	ENSORLG00015022425	smn1	52	56.000	Oryzias_latipes_hsok
ENSSBOG00000020112	-	87	72.908	ENSOGAG00000031414	-	86	72.908	Otolemur_garnettii
ENSSBOG00000020112	-	94	72.426	ENSOARG00000005425	-	88	76.494	Ovis_aries
ENSSBOG00000020112	-	87	86.000	ENSPPAG00000036640	-	86	85.600	Pan_paniscus
ENSSBOG00000020112	-	87	81.673	ENSPPRG00000005575	-	84	81.275	Panthera_pardus
ENSSBOG00000020112	-	87	82.072	ENSPTIG00000007745	-	84	81.673	Panthera_tigris_altaica
ENSSBOG00000020112	-	87	87.200	ENSPTRG00000016955	-	86	86.400	Pan_troglodytes
ENSSBOG00000020112	-	87	86.800	ENSPANG00000013601	-	78	93.846	Papio_anubis
ENSSBOG00000020112	-	87	81.275	ENSPANG00000000253	-	82	81.600	Papio_anubis
ENSSBOG00000020112	-	87	48.627	ENSPKIG00000011096	smn1	63	52.761	Paramormyrops_kingsleyae
ENSSBOG00000020112	-	87	56.126	ENSPSIG00000014787	-	78	54.510	Pelodiscus_sinensis
ENSSBOG00000020112	-	87	45.769	ENSPMGG00000012285	smn1	55	56.494	Periophthalmus_magnuspinnatus
ENSSBOG00000020112	-	94	60.440	ENSPCIG00000025764	-	84	65.217	Phascolarctos_cinereus
ENSSBOG00000020112	-	87	45.200	ENSPFOG00000007786	smn1	52	58.000	Poecilia_formosa
ENSSBOG00000020112	-	87	47.200	ENSPLAG00000012071	smn1	56	58.000	Poecilia_latipinna
ENSSBOG00000020112	-	87	46.800	ENSPMEG00000017085	smn1	56	57.333	Poecilia_mexicana
ENSSBOG00000020112	-	87	46.400	ENSPREG00000005824	smn1	56	58.667	Poecilia_reticulata
ENSSBOG00000020112	-	88	84.585	ENSPPYG00000015533	-	89	84.190	Pongo_abelii
ENSSBOG00000020112	-	52	70.946	ENSPPYG00000019189	-	75	70.946	Pongo_abelii
ENSSBOG00000020112	-	87	72.549	ENSPCAG00000004187	-	91	73.047	Procavia_capensis
ENSSBOG00000020112	-	64	81.522	ENSPCOG00000022307	-	80	81.522	Propithecus_coquereli
ENSSBOG00000020112	-	87	80.478	ENSPVAG00000005977	-	83	80.080	Pteropus_vampyrus
ENSSBOG00000020112	-	52	61.333	ENSPNYG00000014148	smn1	61	55.367	Pundamilia_nyererei
ENSSBOG00000020112	-	87	74.400	ENSRNOG00000018067	Smn1	83	74.000	Rattus_norvegicus
ENSSBOG00000020112	-	87	72.112	ENSRBIG00000036775	-	81	71.315	Rhinopithecus_bieti
ENSSBOG00000020112	-	87	86.800	ENSRBIG00000037052	-	78	93.846	Rhinopithecus_bieti
ENSSBOG00000020112	-	87	86.800	ENSRROG00000039399	-	86	86.400	Rhinopithecus_roxellana
ENSSBOG00000020112	-	87	68.526	ENSRROG00000031088	-	84	67.729	Rhinopithecus_roxellana
ENSSBOG00000020112	-	97	60.000	ENSSHAG00000001499	-	90	64.615	Sarcophilus_harrisii
ENSSBOG00000020112	-	87	44.747	ENSSFOG00015015507	smn1	55	54.054	Scleropages_formosus
ENSSBOG00000020112	-	87	44.800	ENSSDUG00000018533	smn1	55	54.658	Seriola_dumerili
ENSSBOG00000020112	-	87	45.200	ENSSLDG00000021135	smn1	55	55.280	Seriola_lalandi_dorsalis
ENSSBOG00000020112	-	87	57.708	ENSSPUG00000000373	-	84	58.103	Sphenodon_punctatus
ENSSBOG00000020112	-	87	44.882	ENSSPAG00000004345	smn1	55	57.333	Stegastes_partitus
ENSSBOG00000020112	-	87	81.275	ENSSSCG00000016970	-	83	80.876	Sus_scrofa
ENSSBOG00000020112	-	88	57.540	ENSSSCG00000029127	-	80	56.746	Sus_scrofa
ENSSBOG00000020112	-	69	48.990	ENSSSCG00000033865	-	82	52.525	Sus_scrofa
ENSSBOG00000020112	-	87	53.543	ENSTGUG00000001548	-	89	52.941	Taeniopygia_guttata
ENSSBOG00000020112	-	59	83.432	ENSTBEG00000002399	-	82	83.432	Tupaia_belangeri
ENSSBOG00000020112	-	87	78.088	ENSTTRG00000005080	-	82	78.088	Tursiops_truncatus
ENSSBOG00000020112	-	59	82.840	ENSUAMG00000024947	-	62	82.840	Ursus_americanus
ENSSBOG00000020112	-	87	80.876	ENSUMAG00000007842	-	62	80.478	Ursus_maritimus
ENSSBOG00000020112	-	87	66.400	ENSVPAG00000009887	-	87	66.000	Vicugna_pacos
ENSSBOG00000020112	-	87	79.283	ENSVVUG00000006934	-	84	78.884	Vulpes_vulpes
ENSSBOG00000020112	-	54	41.975	ENSXETG00000004912	-	78	55.556	Xenopus_tropicalis
ENSSBOG00000020112	-	87	49.416	ENSXETG00000018189	smn2	60	54.023	Xenopus_tropicalis
ENSSBOG00000020112	-	87	46.800	ENSXMAG00000001521	smn1	56	58.000	Xiphophorus_maculatus