EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000020207 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 2535 bases
Position: chrJH378246.1:3481116-3483650
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000006624	tRNA-synt_1c_C	PF03950.18	3.3e-23	1	1
ENSSBOP00000006603	tRNA-synt_1c_C	PF03950.18	4.4e-23	1	1
ENSSBOP00000006586	tRNA-synt_1c_C	PF03950.18	4.6e-23	1	1
ENSSBOP00000006624	tRNA_synt_1c_R2	PF04557.15	3.8e-26	1	1
ENSSBOP00000006586	tRNA_synt_1c_R2	PF04557.15	5.4e-26	1	1
ENSSBOP00000006629	tRNA_synt_1c_R2	PF04557.15	6.8e-15	1	1
ENSSBOP00000006603	tRNA_synt_1c_R2	PF04557.15	2e-12	1	1
ENSSBOP00000006629	tRNA_synt_1c_R1	PF04558.15	1.6e-45	1	1
ENSSBOP00000006586	tRNA_synt_1c_R1	PF04558.15	2.7e-44	1	1
ENSSBOP00000006603	tRNA_synt_1c_R1	PF04558.15	3.8e-44	1	1
ENSSBOP00000006634	tRNA_synt_1c_R1	PF04558.15	8.8e-13	1	1
ENSSBOP00000006586	tRNA-synt_1c	PF00749.21	3.1e-52	1	1
ENSSBOP00000006624	tRNA-synt_1c	PF00749.21	4.1e-52	1	1
ENSSBOP00000006603	tRNA-synt_1c	PF00749.21	7e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000023353	-	2262	-	ENSSBOP00000006603	753 (aa)	-	A0A2K6SGU9
ENSSBOT00000023379	-	786	-	ENSSBOP00000006629	261 (aa)	-	A0A2K6SGY8
ENSSBOT00000023336	-	2346	-	ENSSBOP00000006586	781 (aa)	-	A0A2K6SGR6
ENSSBOT00000023384	-	309	-	ENSSBOP00000006634	102 (aa)	-	A0A2K6SGZ5
ENSSBOT00000023374	-	1833	-	ENSSBOP00000006624	610 (aa)	-	A0A2K6SGY5

Gene Model

Click here to download ENSSBOG00000020207's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000020207's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000020207	-	86	81.356	ENSSBOG00000025151	-	100	81.356
ENSSBOG00000020207	-	90	92.766	ENSSBOG00000025786	-	100	74.359

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000020207	-	100	85.294	ENSG00000172053	QARS	100	90.625	Homo_sapiens
ENSSBOG00000020207	-	90	65.837	ENSAPOG00000000838	qars	91	65.837	Acanthochromis_polyacanthus
ENSSBOG00000020207	-	90	83.830	ENSAMEG00000012838	QARS	100	70.361	Ailuropoda_melanoleuca
ENSSBOG00000020207	-	90	63.492	ENSACIG00000022417	qars	90	64.115	Amphilophus_citrinellus
ENSSBOG00000020207	-	89	64.988	ENSAOCG00000004800	qars	90	64.988	Amphiprion_ocellaris
ENSSBOG00000020207	-	89	54.144	ENSAPEG00000012849	qars	95	62.132	Amphiprion_percula
ENSSBOG00000020207	-	88	69.611	ENSATEG00000008797	qars	91	66.366	Anabas_testudineus
ENSSBOG00000020207	-	66	60.072	ENSAPLG00000007248	QARS	94	49.162	Anas_platyrhynchos
ENSSBOG00000020207	-	88	71.530	ENSACAG00000012645	QARS	99	57.326	Anolis_carolinensis
ENSSBOG00000020207	-	90	82.979	ENSANAG00000028366	-	97	68.163	Aotus_nancymaae
ENSSBOG00000020207	-	90	91.915	ENSANAG00000031868	-	100	74.098	Aotus_nancymaae
ENSSBOG00000020207	-	90	67.195	ENSAMXG00000014553	qars	91	67.421	Astyanax_mexicanus
ENSSBOG00000020207	-	90	83.830	ENSBTAG00000018928	QARS	100	70.232	Bos_taurus
ENSSBOG00000020207	-	90	92.766	ENSCJAG00000003457	QARS	100	74.485	Callithrix_jacchus
ENSSBOG00000020207	-	90	84.681	ENSCAFG00000011846	QARS	100	70.361	Canis_familiaris
ENSSBOG00000020207	-	90	84.681	ENSCAFG00020020980	QARS	100	70.361	Canis_lupus_dingo
ENSSBOG00000020207	-	90	83.830	ENSCHIG00000022953	QARS	100	70.747	Capra_hircus
ENSSBOG00000020207	-	90	88.085	ENSTSYG00000008462	QARS	91	84.685	Carlito_syrichta
ENSSBOG00000020207	-	90	82.553	ENSCPOG00000009967	QARS	100	68.170	Cavia_porcellus
ENSSBOG00000020207	-	90	92.766	ENSCCAG00000037772	-	100	73.582	Cebus_capucinus
ENSSBOG00000020207	-	100	92.157	ENSCCAG00000031010	-	100	92.157	Cebus_capucinus
ENSSBOG00000020207	-	100	90.196	ENSCCAG00000034381	-	100	90.196	Cebus_capucinus
ENSSBOG00000020207	-	90	91.064	ENSCATG00000037275	QARS	100	73.840	Cercocebus_atys
ENSSBOG00000020207	-	90	83.404	ENSCLAG00000009982	QARS	91	81.081	Chinchilla_lanigera
ENSSBOG00000020207	-	90	90.638	ENSCSAG00000015198	QARS	100	73.711	Chlorocebus_sabaeus
ENSSBOG00000020207	-	69	79.330	ENSCHOG00000001084	QARS	93	62.083	Choloepus_hoffmanni
ENSSBOG00000020207	-	90	70.513	ENSCPBG00000008614	QARS	99	59.564	Chrysemys_picta_bellii
ENSSBOG00000020207	-	82	89.671	ENSCANG00000034041	QARS	100	72.437	Colobus_angolensis_palliatus
ENSSBOG00000020207	-	90	83.830	ENSCGRG00001021363	Qars	100	68.814	Cricetulus_griseus_chok1gshd
ENSSBOG00000020207	-	90	83.830	ENSCGRG00000006805	Qars	100	68.814	Cricetulus_griseus_crigri
ENSSBOG00000020207	-	88	66.783	ENSCSEG00000021387	qars	91	64.126	Cynoglossus_semilaevis
ENSSBOG00000020207	-	88	68.198	ENSCVAG00000012209	qars	91	65.011	Cyprinodon_variegatus
ENSSBOG00000020207	-	88	67.616	ENSDARG00000010316	qars	96	63.781	Danio_rerio
ENSSBOG00000020207	-	90	81.702	ENSDNOG00000014157	QARS	94	68.557	Dasypus_novemcinctus
ENSSBOG00000020207	-	99	78.077	ENSDORG00000007392	-	96	78.077	Dipodomys_ordii
ENSSBOG00000020207	-	90	71.064	ENSETEG00000006900	QARS	81	74.870	Echinops_telfairi
ENSSBOG00000020207	-	77	43.993	ENSEBUG00000010287	qars	93	41.265	Eptatretus_burgeri
ENSSBOG00000020207	-	100	76.806	ENSEASG00005010497	QARS	100	76.806	Equus_asinus_asinus
ENSSBOG00000020207	-	100	77.567	ENSECAG00000000809	QARS	100	77.567	Equus_caballus
ENSSBOG00000020207	-	80	86.036	ENSEEUG00000004666	QARS	85	76.214	Erinaceus_europaeus
ENSSBOG00000020207	-	88	67.260	ENSELUG00000024142	qars	91	64.626	Esox_lucius
ENSSBOG00000020207	-	90	85.532	ENSFCAG00000009846	QARS	100	71.134	Felis_catus
ENSSBOG00000020207	-	87	71.786	ENSFALG00000013066	QARS	99	57.161	Ficedula_albicollis
ENSSBOG00000020207	-	90	82.553	ENSFDAG00000010076	QARS	100	68.428	Fukomys_damarensis
ENSSBOG00000020207	-	88	67.138	ENSFHEG00000003621	qars	91	64.270	Fundulus_heteroclitus
ENSSBOG00000020207	-	88	65.603	ENSGMOG00000016875	qars	90	63.122	Gadus_morhua
ENSSBOG00000020207	-	87	71.786	ENSGALG00000029980	QARS	92	55.412	Gallus_gallus
ENSSBOG00000020207	-	88	67.138	ENSGAFG00000021070	qars	91	64.786	Gambusia_affinis
ENSSBOG00000020207	-	90	64.108	ENSGACG00000002887	qars	98	63.134	Gasterosteus_aculeatus
ENSSBOG00000020207	-	71	68.056	ENSGAGG00000002132	-	88	65.169	Gopherus_agassizii
ENSSBOG00000020207	-	90	89.787	ENSGGOG00000014882	QARS	100	73.711	Gorilla_gorilla
ENSSBOG00000020207	-	88	68.905	ENSHBUG00000000168	qars	91	66.140	Haplochromis_burtoni
ENSSBOG00000020207	-	90	83.404	ENSHGLG00000014071	QARS	100	69.330	Heterocephalus_glaber_female
ENSSBOG00000020207	-	90	83.830	ENSHGLG00100014107	QARS	100	69.459	Heterocephalus_glaber_male
ENSSBOG00000020207	-	88	67.730	ENSHCOG00000008150	qars	91	64.027	Hippocampus_comes
ENSSBOG00000020207	-	88	67.616	ENSIPUG00000022101	qars	85	65.306	Ictalurus_punctatus
ENSSBOG00000020207	-	90	85.957	ENSSTOG00000001822	QARS	91	83.559	Ictidomys_tridecemlineatus
ENSSBOG00000020207	-	90	82.979	ENSJJAG00000010985	Qars	100	67.054	Jaculus_jaculus
ENSSBOG00000020207	-	88	68.905	ENSKMAG00000015716	qars	91	66.140	Kryptolebias_marmoratus
ENSSBOG00000020207	-	90	59.410	ENSLBEG00000008312	qars	90	60.096	Labrus_bergylta
ENSSBOG00000020207	-	90	60.759	ENSLACG00000005667	QARS	100	56.170	Latimeria_chalumnae
ENSSBOG00000020207	-	88	70.107	ENSLOCG00000014502	qars	90	67.120	Lepisosteus_oculatus
ENSSBOG00000020207	-	90	81.702	ENSLAFG00000012841	QARS	100	68.686	Loxodonta_africana
ENSSBOG00000020207	-	90	91.064	ENSMFAG00000033478	QARS	100	73.840	Macaca_fascicularis
ENSSBOG00000020207	-	90	91.064	ENSMMUG00000002943	QARS	100	83.198	Macaca_mulatta
ENSSBOG00000020207	-	90	91.064	ENSMNEG00000035096	QARS	100	73.840	Macaca_nemestrina
ENSSBOG00000020207	-	90	91.064	ENSMLEG00000042334	QARS	100	73.582	Mandrillus_leucophaeus
ENSSBOG00000020207	-	88	68.551	ENSMAMG00000012801	qars	91	66.366	Mastacembelus_armatus
ENSSBOG00000020207	-	88	68.905	ENSMZEG00005024193	qars	91	66.140	Maylandia_zebra
ENSSBOG00000020207	-	87	72.143	ENSMGAG00000008134	QARS	99	56.336	Meleagris_gallopavo
ENSSBOG00000020207	-	90	83.404	ENSMAUG00000022218	Qars	100	69.588	Mesocricetus_auratus
ENSSBOG00000020207	-	90	86.383	ENSMICG00000007885	QARS	100	71.521	Microcebus_murinus
ENSSBOG00000020207	-	90	81.702	ENSMOCG00000019363	Qars	100	68.686	Microtus_ochrogaster
ENSSBOG00000020207	-	90	61.348	ENSMMOG00000020916	qars	91	61.348	Mola_mola
ENSSBOG00000020207	-	89	69.957	ENSMODG00000013321	QARS	99	60.336	Monodelphis_domestica
ENSSBOG00000020207	-	88	68.440	ENSMALG00000020739	qars	91	65.158	Monopterus_albus
ENSSBOG00000020207	-	90	81.277	MGP_CAROLIEiJ_G0032693	Qars	94	76.224	Mus_caroli
ENSSBOG00000020207	-	100	77.656	ENSMUSG00000032604	Qars	97	85.088	Mus_musculus
ENSSBOG00000020207	-	90	81.277	MGP_PahariEiJ_G0015561	Qars	94	76.923	Mus_pahari
ENSSBOG00000020207	-	90	81.277	MGP_SPRETEiJ_G0033838	Qars	94	76.224	Mus_spretus
ENSSBOG00000020207	-	90	84.681	ENSMPUG00000014198	QARS	100	70.361	Mustela_putorius_furo
ENSSBOG00000020207	-	90	81.702	ENSMLUG00000013976	QARS	100	69.330	Myotis_lucifugus
ENSSBOG00000020207	-	90	84.255	ENSNGAG00000019897	Qars	100	69.459	Nannospalax_galili
ENSSBOG00000020207	-	88	68.905	ENSNBRG00000018005	qars	91	66.140	Neolamprologus_brichardi
ENSSBOG00000020207	-	88	74.088	ENSNLEG00000006772	-	98	71.861	Nomascus_leucogenys
ENSSBOG00000020207	-	85	59.566	ENSMEUG00000006894	QARS	100	59.566	Notamacropus_eugenii
ENSSBOG00000020207	-	54	61.481	ENSOPRG00000006256	-	82	78.947	Ochotona_princeps
ENSSBOG00000020207	-	90	82.128	ENSODEG00000018381	-	100	68.428	Octodon_degus
ENSSBOG00000020207	-	100	76.426	ENSODEG00000001143	-	100	76.426	Octodon_degus
ENSSBOG00000020207	-	88	68.551	ENSONIG00000017262	qars	91	66.140	Oreochromis_niloticus
ENSSBOG00000020207	-	88	56.888	ENSOANG00000014118	QARS	100	57.686	Ornithorhynchus_anatinus
ENSSBOG00000020207	-	90	85.532	ENSOCUG00000005082	QARS	100	70.528	Oryctolagus_cuniculus
ENSSBOG00000020207	-	88	68.440	ENSORLG00000010737	qars	91	65.385	Oryzias_latipes
ENSSBOG00000020207	-	88	68.440	ENSORLG00020020742	qars	91	65.158	Oryzias_latipes_hni
ENSSBOG00000020207	-	88	68.440	ENSORLG00015000737	qars	91	65.385	Oryzias_latipes_hsok
ENSSBOG00000020207	-	88	69.149	ENSOMEG00000009629	qars	99	53.539	Oryzias_melastigma
ENSSBOG00000020207	-	90	86.809	ENSOGAG00000003954	QARS	100	66.982	Otolemur_garnettii
ENSSBOG00000020207	-	90	83.830	ENSOARG00000015195	QARS	100	70.490	Ovis_aries
ENSSBOG00000020207	-	90	85.532	ENSPPRG00000005221	QARS	100	71.134	Panthera_pardus
ENSSBOG00000020207	-	90	85.532	ENSPTIG00000017922	QARS	100	71.134	Panthera_tigris_altaica
ENSSBOG00000020207	-	90	89.362	ENSPTRG00000014910	QARS	100	73.454	Pan_troglodytes
ENSSBOG00000020207	-	90	91.064	ENSPANG00000016987	QARS	100	73.454	Papio_anubis
ENSSBOG00000020207	-	67	53.623	ENSPKIG00000011455	-	65	55.102	Paramormyrops_kingsleyae
ENSSBOG00000020207	-	89	61.687	ENSPMGG00000012803	qars	90	61.687	Periophthalmus_magnuspinnatus
ENSSBOG00000020207	-	90	83.830	ENSPEMG00000017730	Qars	100	69.330	Peromyscus_maniculatus_bairdii
ENSSBOG00000020207	-	89	72.222	ENSPCIG00000018726	QARS	93	62.329	Phascolarctos_cinereus
ENSSBOG00000020207	-	88	66.901	ENSPFOG00000012143	qars	94	64.027	Poecilia_formosa
ENSSBOG00000020207	-	88	67.254	ENSPLAG00000012885	qars	91	64.414	Poecilia_latipinna
ENSSBOG00000020207	-	88	67.138	ENSPMEG00000009343	qars	90	64.399	Poecilia_mexicana
ENSSBOG00000020207	-	90	58.998	ENSPREG00000016290	qars	90	59.518	Poecilia_reticulata
ENSSBOG00000020207	-	90	89.362	ENSPPYG00000013882	QARS	98	73.582	Pongo_abelii
ENSSBOG00000020207	-	72	83.562	ENSPCAG00000011911	-	51	80.233	Procavia_capensis
ENSSBOG00000020207	-	90	85.106	ENSPCOG00000022610	QARS	100	71.134	Propithecus_coquereli
ENSSBOG00000020207	-	90	80.851	ENSPVAG00000008720	QARS	100	69.340	Pteropus_vampyrus
ENSSBOG00000020207	-	88	68.198	ENSPNYG00000005285	qars	91	65.237	Pundamilia_nyererei
ENSSBOG00000020207	-	88	68.683	ENSPNAG00000029441	qars	91	65.986	Pygocentrus_nattereri
ENSSBOG00000020207	-	90	85.532	ENSRNOG00000060912	Qars	100	70.232	Rattus_norvegicus
ENSSBOG00000020207	-	90	89.362	ENSRNOG00000054139	LOC100911132	100	73.454	Rattus_norvegicus
ENSSBOG00000020207	-	90	90.213	ENSRBIG00000030327	QARS	100	73.325	Rhinopithecus_bieti
ENSSBOG00000020207	-	90	90.213	ENSRROG00000034983	QARS	100	73.196	Rhinopithecus_roxellana
ENSSBOG00000020207	-	87	74.021	ENSSHAG00000015068	QARS	91	72.236	Sarcophilus_harrisii
ENSSBOG00000020207	-	87	67.143	ENSSFOG00015015812	qars	91	63.409	Scleropages_formosus
ENSSBOG00000020207	-	88	67.845	ENSSMAG00000011758	qars	91	65.011	Scophthalmus_maximus
ENSSBOG00000020207	-	88	68.905	ENSSDUG00000014004	qars	91	65.688	Seriola_dumerili
ENSSBOG00000020207	-	88	68.905	ENSSLDG00000005475	qars	91	65.463	Seriola_lalandi_dorsalis
ENSSBOG00000020207	-	73	86.486	ENSSARG00000000062	QARS	67	87.500	Sorex_araneus
ENSSBOG00000020207	-	83	67.170	ENSSPUG00000010197	QARS	95	56.292	Sphenodon_punctatus
ENSSBOG00000020207	-	88	68.794	ENSSPAG00000010803	qars	91	64.626	Stegastes_partitus
ENSSBOG00000020207	-	90	84.681	ENSSSCG00000032031	QARS	100	70.619	Sus_scrofa
ENSSBOG00000020207	-	87	71.429	ENSTGUG00000008887	QARS	99	56.908	Taeniopygia_guttata
ENSSBOG00000020207	-	90	63.739	ENSTRUG00000021416	qars	91	63.739	Takifugu_rubripes
ENSSBOG00000020207	-	89	52.321	ENSTNIG00000017913	qars	88	51.370	Tetraodon_nigroviridis
ENSSBOG00000020207	-	80	84.091	ENSTBEG00000006109	QARS	90	84.091	Tupaia_belangeri
ENSSBOG00000020207	-	90	84.681	ENSTTRG00000017352	QARS	100	70.619	Tursiops_truncatus
ENSSBOG00000020207	-	90	84.255	ENSUAMG00000010069	QARS	88	72.777	Ursus_americanus
ENSSBOG00000020207	-	100	79.853	ENSUMAG00000023208	QARS	100	79.853	Ursus_maritimus
ENSSBOG00000020207	-	90	68.511	ENSVPAG00000009664	QARS	76	81.250	Vicugna_pacos
ENSSBOG00000020207	-	90	84.681	ENSVVUG00000029158	QARS	100	70.773	Vulpes_vulpes
ENSSBOG00000020207	-	89	66.524	ENSXETG00000009351	qars	99	56.628	Xenopus_tropicalis
ENSSBOG00000020207	-	90	63.265	ENSXCOG00000005214	qars	90	63.810	Xiphophorus_couchianus
ENSSBOG00000020207	-	88	67.138	ENSXMAG00000015931	qars	91	64.560	Xiphophorus_maculatus