EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000020297 (Gene tree)
Gene ID: 101041959
Gene Symbol: RPP40
Alias: RNASEP1|bA428J1.3
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 9507 bases
Position: chrJH378127.1:21120585-21130091
Accession: 20992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000006660	Ribonuc_P_40	PF08584.11	9.8e-95	1	1
ENSSBOP00000006670	Ribonuc_P_40	PF08584.11	5.8e-78	1	1
ENSSBOP00000006675	Ribonuc_P_40	PF08584.11	1e-74	1	2
ENSSBOP00000006675	Ribonuc_P_40	PF08584.11	1e-74	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000023410	RPP40-201	1183	XM_003927382	ENSSBOP00000006660	363 (aa)	XP_003927431	A0A2K6SGZ8
ENSSBOT00000023425	RPP40-203	966	-	ENSSBOP00000006675	321 (aa)	-	A0A2K6SH12
ENSSBOT00000023420	RPP40-202	1023	-	ENSSBOP00000006670	340 (aa)	-	A0A2K6SH08

Gene Model

Click here to download ENSSBOG00000020297's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03008	Ribosome biogenesis in eukaryotes	KEGG
sbq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000020297's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000020297	RPP40	100	95.588	ENSG00000124787	RPP40	100	95.588	Homo_sapiens
ENSSBOG00000020297	RPP40	88	32.107	ENSAPOG00000008660	rpp40	92	32.107	Acanthochromis_polyacanthus
ENSSBOG00000020297	RPP40	100	85.950	ENSAMEG00000012938	RPP40	100	85.950	Ailuropoda_melanoleuca
ENSSBOG00000020297	RPP40	98	36.188	ENSACIG00000003617	rpp40	98	36.188	Amphilophus_citrinellus
ENSSBOG00000020297	RPP40	98	37.535	ENSAOCG00000011846	rpp40	99	37.535	Amphiprion_ocellaris
ENSSBOG00000020297	RPP40	98	37.535	ENSAPEG00000001322	rpp40	99	37.535	Amphiprion_percula
ENSSBOG00000020297	RPP40	98	37.604	ENSATEG00000006584	rpp40	99	37.604	Anabas_testudineus
ENSSBOG00000020297	RPP40	83	65.667	ENSAPLG00000005691	RPP40	99	65.667	Anas_platyrhynchos
ENSSBOG00000020297	RPP40	99	61.003	ENSACAG00000006550	RPP40	88	61.003	Anolis_carolinensis
ENSSBOG00000020297	RPP40	100	97.819	ENSANAG00000029246	RPP40	100	97.819	Aotus_nancymaae
ENSSBOG00000020297	RPP40	98	38.028	ENSACLG00000015883	rpp40	96	38.028	Astatotilapia_calliptera
ENSSBOG00000020297	RPP40	98	47.899	ENSAMXG00000001755	rpp40	99	47.899	Astyanax_mexicanus
ENSSBOG00000020297	RPP40	100	81.818	ENSBTAG00000003332	RPP40	100	81.818	Bos_taurus
ENSSBOG00000020297	RPP40	100	98.442	ENSCJAG00000021373	RPP40	100	98.442	Callithrix_jacchus
ENSSBOG00000020297	RPP40	100	85.124	ENSCAFG00000009435	RPP40	100	85.124	Canis_familiaris
ENSSBOG00000020297	RPP40	100	85.124	ENSCAFG00020013380	RPP40	100	85.124	Canis_lupus_dingo
ENSSBOG00000020297	RPP40	100	81.543	ENSCHIG00000016849	RPP40	100	81.543	Capra_hircus
ENSSBOG00000020297	RPP40	100	87.879	ENSTSYG00000032857	RPP40	100	89.109	Carlito_syrichta
ENSSBOG00000020297	RPP40	90	77.676	ENSCAPG00000004957	RPP40	98	77.676	Cavia_aperea
ENSSBOG00000020297	RPP40	100	83.471	ENSCPOG00000005855	RPP40	100	83.471	Cavia_porcellus
ENSSBOG00000020297	RPP40	100	98.824	ENSCCAG00000019809	RPP40	100	98.824	Cebus_capucinus
ENSSBOG00000020297	RPP40	100	94.215	ENSCATG00000038787	RPP40	100	94.215	Cercocebus_atys
ENSSBOG00000020297	RPP40	100	82.920	ENSCLAG00000003235	RPP40	100	82.920	Chinchilla_lanigera
ENSSBOG00000020297	RPP40	100	94.490	ENSCSAG00000007307	RPP40	100	94.490	Chlorocebus_sabaeus
ENSSBOG00000020297	RPP40	73	68.273	ENSCHOG00000005856	-	99	68.273	Choloepus_hoffmanni
ENSSBOG00000020297	RPP40	99	68.056	ENSCPBG00000009003	RPP40	99	68.056	Chrysemys_picta_bellii
ENSSBOG00000020297	RPP40	100	95.041	ENSCANG00000033965	RPP40	100	95.041	Colobus_angolensis_palliatus
ENSSBOG00000020297	RPP40	100	77.686	ENSCGRG00001018328	Rpp40	100	77.686	Cricetulus_griseus_chok1gshd
ENSSBOG00000020297	RPP40	100	77.686	ENSCGRG00000011344	Rpp40	100	77.686	Cricetulus_griseus_crigri
ENSSBOG00000020297	RPP40	98	35.674	ENSCSEG00000015006	-	98	35.674	Cynoglossus_semilaevis
ENSSBOG00000020297	RPP40	74	33.453	ENSCVAG00000012169	rpp40	100	33.453	Cyprinodon_variegatus
ENSSBOG00000020297	RPP40	99	49.304	ENSDARG00000017605	rpp40	99	49.304	Danio_rerio
ENSSBOG00000020297	RPP40	82	81.145	ENSDNOG00000048136	RPP40	99	81.145	Dasypus_novemcinctus
ENSSBOG00000020297	RPP40	100	61.299	ENSDORG00000011196	-	100	61.299	Dipodomys_ordii
ENSSBOG00000020297	RPP40	100	81.267	ENSDORG00000029944	-	100	81.267	Dipodomys_ordii
ENSSBOG00000020297	RPP40	90	79.817	ENSETEG00000007458	RPP40	100	65.565	Echinops_telfairi
ENSSBOG00000020297	RPP40	98	43.662	ENSEBUG00000000386	rpp40	99	43.662	Eptatretus_burgeri
ENSSBOG00000020297	RPP40	100	86.777	ENSEASG00005012116	RPP40	80	86.777	Equus_asinus_asinus
ENSSBOG00000020297	RPP40	100	87.052	ENSECAG00000017247	RPP40	80	87.052	Equus_caballus
ENSSBOG00000020297	RPP40	70	78.049	ENSEEUG00000012087	RPP40	100	64.983	Erinaceus_europaeus
ENSSBOG00000020297	RPP40	98	46.927	ENSELUG00000017004	rpp40	99	46.927	Esox_lucius
ENSSBOG00000020297	RPP40	100	86.226	ENSFCAG00000009249	RPP40	100	86.226	Felis_catus
ENSSBOG00000020297	RPP40	84	69.318	ENSFALG00000013166	RPP40	100	63.303	Ficedula_albicollis
ENSSBOG00000020297	RPP40	80	69.416	ENSFDAG00000000265	-	99	69.416	Fukomys_damarensis
ENSSBOG00000020297	RPP40	100	84.848	ENSFDAG00000013001	-	100	84.848	Fukomys_damarensis
ENSSBOG00000020297	RPP40	98	40.223	ENSFHEG00000021429	rpp40	88	40.223	Fundulus_heteroclitus
ENSSBOG00000020297	RPP40	87	43.929	ENSGMOG00000018653	rpp40	100	43.929	Gadus_morhua
ENSSBOG00000020297	RPP40	99	64.444	ENSGALG00000036074	RPP40	99	64.444	Gallus_gallus
ENSSBOG00000020297	RPP40	82	34.564	ENSGAFG00000004189	-	98	34.564	Gambusia_affinis
ENSSBOG00000020297	RPP40	98	37.815	ENSGACG00000002472	rpp40	99	37.815	Gasterosteus_aculeatus
ENSSBOG00000020297	RPP40	99	68.333	ENSGAGG00000012918	RPP40	99	68.333	Gopherus_agassizii
ENSSBOG00000020297	RPP40	100	95.041	ENSGGOG00000013764	RPP40	100	95.041	Gorilla_gorilla
ENSSBOG00000020297	RPP40	90	37.615	ENSHBUG00000009378	rpp40	93	37.615	Haplochromis_burtoni
ENSSBOG00000020297	RPP40	100	84.848	ENSHGLG00000004871	RPP40	100	84.848	Heterocephalus_glaber_female
ENSSBOG00000020297	RPP40	100	84.848	ENSHGLG00100002080	RPP40	100	84.848	Heterocephalus_glaber_male
ENSSBOG00000020297	RPP40	96	31.034	ENSHCOG00000013264	-	93	31.034	Hippocampus_comes
ENSSBOG00000020297	RPP40	99	46.111	ENSIPUG00000008951	RPP40	99	46.111	Ictalurus_punctatus
ENSSBOG00000020297	RPP40	100	83.747	ENSSTOG00000011199	RPP40	100	83.747	Ictidomys_tridecemlineatus
ENSSBOG00000020297	RPP40	100	77.647	ENSJJAG00000020629	Rpp40	100	77.647	Jaculus_jaculus
ENSSBOG00000020297	RPP40	98	36.975	ENSKMAG00000019358	rpp40	99	36.975	Kryptolebias_marmoratus
ENSSBOG00000020297	RPP40	98	39.496	ENSLBEG00000022724	rpp40	99	39.496	Labrus_bergylta
ENSSBOG00000020297	RPP40	99	58.333	ENSLACG00000014848	RPP40	99	58.333	Latimeria_chalumnae
ENSSBOG00000020297	RPP40	100	52.066	ENSLOCG00000011650	rpp40	100	52.066	Lepisosteus_oculatus
ENSSBOG00000020297	RPP40	83	83.498	ENSLAFG00000007530	RPP40	100	83.498	Loxodonta_africana
ENSSBOG00000020297	RPP40	100	94.412	ENSMFAG00000043100	RPP40	100	94.412	Macaca_fascicularis
ENSSBOG00000020297	RPP40	100	94.118	ENSMMUG00000004966	RPP40	100	94.118	Macaca_mulatta
ENSSBOG00000020297	RPP40	100	95.000	ENSMNEG00000041986	RPP40	100	95.000	Macaca_nemestrina
ENSSBOG00000020297	RPP40	98	85.672	ENSMLEG00000040851	RPP40	100	93.182	Mandrillus_leucophaeus
ENSSBOG00000020297	RPP40	98	37.815	ENSMAMG00000019551	rpp40	98	37.815	Mastacembelus_armatus
ENSSBOG00000020297	RPP40	99	38.504	ENSMZEG00005019475	rpp40	99	38.504	Maylandia_zebra
ENSSBOG00000020297	RPP40	99	60.556	ENSMGAG00000004009	RPP40	99	60.556	Meleagris_gallopavo
ENSSBOG00000020297	RPP40	100	81.267	ENSMAUG00000010268	Rpp40	100	81.267	Mesocricetus_auratus
ENSSBOG00000020297	RPP40	100	85.950	ENSMICG00000003297	RPP40	100	85.047	Microcebus_murinus
ENSSBOG00000020297	RPP40	100	82.059	ENSMOCG00000000305	Rpp40	100	82.059	Microtus_ochrogaster
ENSSBOG00000020297	RPP40	98	34.615	ENSMMOG00000020591	-	99	34.615	Mola_mola
ENSSBOG00000020297	RPP40	100	78.571	ENSMODG00000009826	RPP40	100	78.571	Monodelphis_domestica
ENSSBOG00000020297	RPP40	98	38.413	ENSMALG00000020133	rpp40	99	38.095	Monopterus_albus
ENSSBOG00000020297	RPP40	100	81.267	MGP_CAROLIEiJ_G0018429	Rpp40	100	81.267	Mus_caroli
ENSSBOG00000020297	RPP40	100	82.645	ENSMUSG00000021418	Rpp40	100	82.645	Mus_musculus
ENSSBOG00000020297	RPP40	100	80.716	MGP_PahariEiJ_G0019497	Rpp40	100	80.716	Mus_pahari
ENSSBOG00000020297	RPP40	100	82.094	MGP_SPRETEiJ_G0019309	Rpp40	100	82.094	Mus_spretus
ENSSBOG00000020297	RPP40	100	85.399	ENSMPUG00000000530	RPP40	93	85.399	Mustela_putorius_furo
ENSSBOG00000020297	RPP40	100	84.022	ENSMLUG00000000501	RPP40	100	84.022	Myotis_lucifugus
ENSSBOG00000020297	RPP40	95	75.145	ENSNGAG00000022529	-	100	75.145	Nannospalax_galili
ENSSBOG00000020297	RPP40	100	84.573	ENSNGAG00000023955	-	100	84.573	Nannospalax_galili
ENSSBOG00000020297	RPP40	87	36.667	ENSNBRG00000017465	rpp40	86	36.842	Neolamprologus_brichardi
ENSSBOG00000020297	RPP40	100	94.412	ENSNLEG00000034397	RPP40	100	94.412	Nomascus_leucogenys
ENSSBOG00000020297	RPP40	100	72.452	ENSMEUG00000005300	RPP40	100	72.452	Notamacropus_eugenii
ENSSBOG00000020297	RPP40	88	81.940	ENSODEG00000006170	-	100	81.940	Octodon_degus
ENSSBOG00000020297	RPP40	100	77.686	ENSODEG00000018153	-	100	77.686	Octodon_degus
ENSSBOG00000020297	RPP40	100	81.818	ENSODEG00000007255	-	100	81.818	Octodon_degus
ENSSBOG00000020297	RPP40	99	38.504	ENSONIG00000014016	rpp40	99	38.504	Oreochromis_niloticus
ENSSBOG00000020297	RPP40	83	73.179	ENSOANG00000001200	RPP40	99	73.179	Ornithorhynchus_anatinus
ENSSBOG00000020297	RPP40	99	74.515	ENSOCUG00000000354	RPP40	99	74.515	Oryctolagus_cuniculus
ENSSBOG00000020297	RPP40	99	37.222	ENSORLG00000008242	-	100	37.222	Oryzias_latipes
ENSSBOG00000020297	RPP40	99	36.389	ENSORLG00020013745	-	91	36.389	Oryzias_latipes_hni
ENSSBOG00000020297	RPP40	99	36.944	ENSORLG00015000887	-	100	36.944	Oryzias_latipes_hsok
ENSSBOG00000020297	RPP40	99	37.396	ENSOMEG00000002747	rpp40	100	37.396	Oryzias_melastigma
ENSSBOG00000020297	RPP40	100	87.328	ENSOGAG00000006055	RPP40	100	87.328	Otolemur_garnettii
ENSSBOG00000020297	RPP40	89	80.864	ENSOARG00000018783	RPP40	100	80.858	Ovis_aries
ENSSBOG00000020297	RPP40	100	95.592	ENSPPAG00000023703	RPP40	100	95.592	Pan_paniscus
ENSSBOG00000020297	RPP40	100	85.950	ENSPPRG00000005612	RPP40	100	85.950	Panthera_pardus
ENSSBOG00000020297	RPP40	100	79.339	ENSPTIG00000018847	RPP40	100	79.339	Panthera_tigris_altaica
ENSSBOG00000020297	RPP40	100	95.317	ENSPTRG00000017690	RPP40	100	95.317	Pan_troglodytes
ENSSBOG00000020297	RPP40	100	94.490	ENSPANG00000017865	RPP40	100	94.490	Papio_anubis
ENSSBOG00000020297	RPP40	98	48.603	ENSPKIG00000006311	rpp40	99	48.468	Paramormyrops_kingsleyae
ENSSBOG00000020297	RPP40	65	70.270	ENSPSIG00000007854	RPP40	100	70.270	Pelodiscus_sinensis
ENSSBOG00000020297	RPP40	92	76.433	ENSPEMG00000020809	Rpp40	91	76.433	Peromyscus_maniculatus_bairdii
ENSSBOG00000020297	RPP40	81	40.288	ENSPMAG00000008412	rpp40	99	44.526	Petromyzon_marinus
ENSSBOG00000020297	RPP40	100	79.339	ENSPCIG00000010682	RPP40	100	79.339	Phascolarctos_cinereus
ENSSBOG00000020297	RPP40	98	35.376	ENSPFOG00000011460	rpp40	98	35.376	Poecilia_formosa
ENSSBOG00000020297	RPP40	98	36.134	ENSPLAG00000001334	rpp40	99	36.134	Poecilia_latipinna
ENSSBOG00000020297	RPP40	98	35.854	ENSPMEG00000007721	rpp40	99	35.854	Poecilia_mexicana
ENSSBOG00000020297	RPP40	98	36.975	ENSPREG00000009215	rpp40	99	36.975	Poecilia_reticulata
ENSSBOG00000020297	RPP40	100	95.041	ENSPPYG00000016194	RPP40	100	95.041	Pongo_abelii
ENSSBOG00000020297	RPP40	51	82.065	ENSPCAG00000002700	-	99	82.065	Procavia_capensis
ENSSBOG00000020297	RPP40	100	87.328	ENSPCOG00000003907	RPP40	100	87.328	Propithecus_coquereli
ENSSBOG00000020297	RPP40	100	87.052	ENSPVAG00000011325	RPP40	100	87.052	Pteropus_vampyrus
ENSSBOG00000020297	RPP40	82	37.584	ENSPNYG00000004432	rpp40	98	37.584	Pundamilia_nyererei
ENSSBOG00000020297	RPP40	98	45.810	ENSPNAG00000019125	rpp40	99	45.810	Pygocentrus_nattereri
ENSSBOG00000020297	RPP40	100	82.094	ENSRNOG00000016226	Rpp40	100	82.838	Rattus_norvegicus
ENSSBOG00000020297	RPP40	100	95.317	ENSRBIG00000035800	RPP40	100	95.380	Rhinopithecus_bieti
ENSSBOG00000020297	RPP40	100	95.317	ENSRROG00000039116	RPP40	100	95.317	Rhinopithecus_roxellana
ENSSBOG00000020297	RPP40	77	77.698	ENSSHAG00000002102	RPP40	100	77.698	Sarcophilus_harrisii
ENSSBOG00000020297	RPP40	99	47.383	ENSSFOG00015001142	rpp40	81	47.383	Scleropages_formosus
ENSSBOG00000020297	RPP40	98	37.255	ENSSDUG00000007202	rpp40	99	37.255	Seriola_dumerili
ENSSBOG00000020297	RPP40	98	37.535	ENSSLDG00000017563	rpp40	99	37.535	Seriola_lalandi_dorsalis
ENSSBOG00000020297	RPP40	81	63.729	ENSSPUG00000018950	-	100	63.729	Sphenodon_punctatus
ENSSBOG00000020297	RPP40	99	64.780	ENSSPUG00000017487	-	99	64.780	Sphenodon_punctatus
ENSSBOG00000020297	RPP40	98	38.655	ENSSPAG00000022716	rpp40	99	38.655	Stegastes_partitus
ENSSBOG00000020297	RPP40	100	81.308	ENSSSCG00000000998	RPP40	100	81.308	Sus_scrofa
ENSSBOG00000020297	RPP40	55	68.750	ENSTGUG00000015246	-	100	68.927	Taeniopygia_guttata
ENSSBOG00000020297	RPP40	99	63.966	ENSTGUG00000002258	-	100	63.966	Taeniopygia_guttata
ENSSBOG00000020297	RPP40	97	38.810	ENSTRUG00000003755	rpp40	98	38.810	Takifugu_rubripes
ENSSBOG00000020297	RPP40	97	36.544	ENSTNIG00000003077	rpp40	98	36.544	Tetraodon_nigroviridis
ENSSBOG00000020297	RPP40	73	59.839	ENSTBEG00000014467	-	73	59.839	Tupaia_belangeri
ENSSBOG00000020297	RPP40	99	76.243	ENSTTRG00000007319	RPP40	100	76.243	Tursiops_truncatus
ENSSBOG00000020297	RPP40	100	85.675	ENSUAMG00000002159	RPP40	100	85.675	Ursus_americanus
ENSSBOG00000020297	RPP40	100	85.675	ENSUMAG00000018639	RPP40	94	85.675	Ursus_maritimus
ENSSBOG00000020297	RPP40	81	61.905	ENSVPAG00000004652	-	99	61.905	Vicugna_pacos
ENSSBOG00000020297	RPP40	100	84.573	ENSVVUG00000005451	RPP40	100	84.573	Vulpes_vulpes
ENSSBOG00000020297	RPP40	99	53.425	ENSXETG00000017617	rpp40	100	53.425	Xenopus_tropicalis
ENSSBOG00000020297	RPP40	63	42.520	ENSXCOG00000019991	-	89	31.677	Xiphophorus_couchianus
ENSSBOG00000020297	RPP40	98	31.325	ENSXMAG00000024940	rpp40	98	31.325	Xiphophorus_maculatus