EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000020632 (Gene tree)
Gene ID: 104652130
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 45539 bases
Position: chrJH378156.1:16082179-16127717
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000007380	PRP1_N	PF06424.12	1.5e-25	1	1
ENSSBOP00000007385	PRP1_N	PF06424.12	2.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000024140	PRPF6-202	1812	-	ENSSBOP00000007385	603 (aa)	-	A0A2K6SJ16
ENSSBOT00000024135	PRPF6-201	2361	XM_010343277	ENSSBOP00000007380	786 (aa)	XP_010341579	A0A2K6SJ11

Gene Model

Click here to download ENSSBOG00000020632's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000020632's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000020632	PRPF6	91	95.398	ENSG00000101161	PRPF6	91	95.398	Homo_sapiens
ENSSBOG00000020632	PRPF6	93	87.716	ENSAPOG00000010395	prpf6	87	89.912	Acanthochromis_polyacanthus
ENSSBOG00000020632	PRPF6	93	93.426	ENSAMEG00000001916	PRPF6	90	93.426	Ailuropoda_melanoleuca
ENSSBOG00000020632	PRPF6	90	88.078	ENSACIG00000019862	prpf6	86	89.617	Amphilophus_citrinellus
ENSSBOG00000020632	PRPF6	93	87.716	ENSAOCG00000012988	prpf6	87	89.912	Amphiprion_ocellaris
ENSSBOG00000020632	PRPF6	93	85.813	ENSAPEG00000008301	prpf6	79	80.438	Amphiprion_percula
ENSSBOG00000020632	PRPF6	90	87.900	ENSATEG00000005581	prpf6	86	89.435	Anabas_testudineus
ENSSBOG00000020632	PRPF6	91	94.867	ENSACAG00000006464	PRPF6	86	94.867	Anolis_carolinensis
ENSSBOG00000020632	PRPF6	97	95.357	ENSANAG00000012661	PRPF6	91	93.945	Aotus_nancymaae
ENSSBOG00000020632	PRPF6	93	87.370	ENSACLG00000025875	prpf6	87	89.558	Astatotilapia_calliptera
ENSSBOG00000020632	PRPF6	93	87.716	ENSAMXG00000001929	prpf6	87	89.912	Astyanax_mexicanus
ENSSBOG00000020632	PRPF6	93	93.426	ENSBTAG00000011656	PRPF6	91	93.426	Bos_taurus
ENSSBOG00000020632	PRPF6	100	95.323	ENSCJAG00000010616	PRPF6	100	95.323	Callithrix_jacchus
ENSSBOG00000020632	PRPF6	93	93.426	ENSCAFG00000013165	PRPF6	91	93.426	Canis_familiaris
ENSSBOG00000020632	PRPF6	93	93.426	ENSCAFG00020002050	PRPF6	91	93.426	Canis_lupus_dingo
ENSSBOG00000020632	PRPF6	93	93.426	ENSCHIG00000018187	PRPF6	91	93.426	Capra_hircus
ENSSBOG00000020632	PRPF6	91	95.398	ENSTSYG00000007814	PRPF6	91	95.398	Carlito_syrichta
ENSSBOG00000020632	PRPF6	93	95.096	ENSCAPG00000015077	PRPF6	94	95.096	Cavia_aperea
ENSSBOG00000020632	PRPF6	91	95.398	ENSCPOG00000007518	PRPF6	91	95.398	Cavia_porcellus
ENSSBOG00000020632	PRPF6	98	94.901	ENSCCAG00000024564	PRPF6	91	95.575	Cebus_capucinus
ENSSBOG00000020632	PRPF6	98	92.787	ENSCATG00000037473	PRPF6	99	92.787	Cercocebus_atys
ENSSBOG00000020632	PRPF6	91	88.319	ENSCLAG00000003854	PRPF6	91	88.319	Chinchilla_lanigera
ENSSBOG00000020632	PRPF6	93	85.274	ENSCSAG00000016742	PRPF6	91	86.515	Chlorocebus_sabaeus
ENSSBOG00000020632	PRPF6	87	72.373	ENSCHOG00000003315	-	94	73.989	Choloepus_hoffmanni
ENSSBOG00000020632	PRPF6	93	93.253	ENSCPBG00000013964	PRPF6	87	93.253	Chrysemys_picta_bellii
ENSSBOG00000020632	PRPF6	91	70.035	ENSCING00000008817	-	88	70.916	Ciona_intestinalis
ENSSBOG00000020632	PRPF6	91	95.398	ENSCANG00000038230	PRPF6	91	95.398	Colobus_angolensis_palliatus
ENSSBOG00000020632	PRPF6	93	93.772	ENSCGRG00001022666	Prpf6	91	93.772	Cricetulus_griseus_chok1gshd
ENSSBOG00000020632	PRPF6	93	79.412	ENSCSEG00000018561	prpf6	91	81.416	Cynoglossus_semilaevis
ENSSBOG00000020632	PRPF6	93	87.543	ENSCVAG00000010550	prpf6	87	89.735	Cyprinodon_variegatus
ENSSBOG00000020632	PRPF6	90	88.256	ENSDARG00000091367	prpf6	89	89.800	Danio_rerio
ENSSBOG00000020632	PRPF6	93	93.080	ENSDNOG00000040544	PRPF6	91	93.080	Dasypus_novemcinctus
ENSSBOG00000020632	PRPF6	89	92.754	ENSDORG00000005406	Prpf6	97	92.754	Dipodomys_ordii
ENSSBOG00000020632	PRPF6	90	70.557	FBgn0036828	CG6841	91	70.217	Drosophila_melanogaster
ENSSBOG00000020632	PRPF6	73	100.000	ENSETEG00000004447	PRPF6	77	100.000	Echinops_telfairi
ENSSBOG00000020632	PRPF6	91	84.035	ENSEBUG00000008835	prpf6	91	84.211	Eptatretus_burgeri
ENSSBOG00000020632	PRPF6	98	88.834	ENSEASG00005023115	PRPF6	99	89.163	Equus_asinus_asinus
ENSSBOG00000020632	PRPF6	93	93.426	ENSECAG00000013983	PRPF6	91	93.426	Equus_caballus
ENSSBOG00000020632	PRPF6	90	76.948	ENSEEUG00000000180	PRPF6	76	80.488	Erinaceus_europaeus
ENSSBOG00000020632	PRPF6	93	85.986	ENSELUG00000001945	prpf6	85	87.965	Esox_lucius
ENSSBOG00000020632	PRPF6	93	93.426	ENSFCAG00000001183	PRPF6	91	93.426	Felis_catus
ENSSBOG00000020632	PRPF6	93	93.080	ENSFALG00000010326	-	88	93.080	Ficedula_albicollis
ENSSBOG00000020632	PRPF6	95	86.435	ENSFALG00000006046	-	88	86.783	Ficedula_albicollis
ENSSBOG00000020632	PRPF6	93	93.772	ENSFDAG00000006451	PRPF6	97	93.772	Fukomys_damarensis
ENSSBOG00000020632	PRPF6	93	88.408	ENSFHEG00000000560	prpf6	88	89.912	Fundulus_heteroclitus
ENSSBOG00000020632	PRPF6	93	83.190	ENSGMOG00000015622	prpf6	90	84.912	Gadus_morhua
ENSSBOG00000020632	PRPF6	93	93.080	ENSGALG00000006001	PRPF6	91	93.080	Gallus_gallus
ENSSBOG00000020632	PRPF6	93	80.104	ENSGAFG00000021109	prpf6	87	82.124	Gambusia_affinis
ENSSBOG00000020632	PRPF6	93	85.640	ENSGACG00000002576	prpf6	90	87.080	Gasterosteus_aculeatus
ENSSBOG00000020632	PRPF6	93	93.253	ENSGAGG00000008653	PRPF6	87	93.253	Gopherus_agassizii
ENSSBOG00000020632	PRPF6	95	95.254	ENSGGOG00000016876	PRPF6	100	95.254	Gorilla_gorilla
ENSSBOG00000020632	PRPF6	93	87.370	ENSHBUG00000004496	prpf6	87	89.558	Haplochromis_burtoni
ENSSBOG00000020632	PRPF6	97	90.262	ENSHGLG00000009222	PRPF6	97	90.262	Heterocephalus_glaber_female
ENSSBOG00000020632	PRPF6	93	93.772	ENSHGLG00100016600	PRPF6	94	93.772	Heterocephalus_glaber_male
ENSSBOG00000020632	PRPF6	93	86.332	ENSHCOG00000011513	prpf6	87	88.496	Hippocampus_comes
ENSSBOG00000020632	PRPF6	90	88.434	ENSIPUG00000004912	prpf6	86	89.982	Ictalurus_punctatus
ENSSBOG00000020632	PRPF6	93	96.263	ENSSTOG00000002922	PRPF6	91	96.263	Ictidomys_tridecemlineatus
ENSSBOG00000020632	PRPF6	93	93.772	ENSJJAG00000000836	Prpf6	91	93.772	Jaculus_jaculus
ENSSBOG00000020632	PRPF6	90	88.434	ENSKMAG00000017800	prpf6	86	89.982	Kryptolebias_marmoratus
ENSSBOG00000020632	PRPF6	93	86.678	ENSLBEG00000012582	prpf6	87	88.142	Labrus_bergylta
ENSSBOG00000020632	PRPF6	93	89.792	ENSLOCG00000004827	prpf6	86	92.035	Lepisosteus_oculatus
ENSSBOG00000020632	PRPF6	93	93.253	ENSLAFG00000005272	PRPF6	91	93.253	Loxodonta_africana
ENSSBOG00000020632	PRPF6	95	95.085	ENSMFAG00000037542	PRPF6	100	95.085	Macaca_fascicularis
ENSSBOG00000020632	PRPF6	93	94.801	ENSMMUG00000015558	PRPF6	98	94.801	Macaca_mulatta
ENSSBOG00000020632	PRPF6	100	70.751	ENSMNEG00000045555	PRPF6	97	70.309	Macaca_nemestrina
ENSSBOG00000020632	PRPF6	93	87.716	ENSMAMG00000010718	prpf6	87	89.912	Mastacembelus_armatus
ENSSBOG00000020632	PRPF6	93	87.197	ENSMZEG00005026539	prpf6	97	88.348	Maylandia_zebra
ENSSBOG00000020632	PRPF6	93	87.370	ENSMZEG00005015261	-	90	89.558	Maylandia_zebra
ENSSBOG00000020632	PRPF6	93	93.080	ENSMGAG00000006634	PRPF6	93	93.080	Meleagris_gallopavo
ENSSBOG00000020632	PRPF6	91	95.398	ENSMAUG00000013969	Prpf6	91	95.398	Mesocricetus_auratus
ENSSBOG00000020632	PRPF6	89	91.078	ENSMICG00000017793	PRPF6	93	99.790	Microcebus_murinus
ENSSBOG00000020632	PRPF6	91	95.398	ENSMOCG00000001701	Prpf6	91	95.398	Microtus_ochrogaster
ENSSBOG00000020632	PRPF6	90	87.900	ENSMMOG00000020419	prpf6	90	89.435	Mola_mola
ENSSBOG00000020632	PRPF6	91	95.044	ENSMODG00000017051	PRPF6	92	95.044	Monodelphis_domestica
ENSSBOG00000020632	PRPF6	93	87.889	ENSMALG00000000089	prpf6	92	89.381	Monopterus_albus
ENSSBOG00000020632	PRPF6	93	90.018	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSSBOG00000020632	PRPF6	93	93.772	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSSBOG00000020632	PRPF6	91	95.398	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSSBOG00000020632	PRPF6	93	93.772	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSSBOG00000020632	PRPF6	93	92.907	ENSMPUG00000008673	PRPF6	99	92.907	Mustela_putorius_furo
ENSSBOG00000020632	PRPF6	93	93.772	ENSNGAG00000003365	Prpf6	91	93.772	Nannospalax_galili
ENSSBOG00000020632	PRPF6	93	87.543	ENSNBRG00000015025	prpf6	87	89.735	Neolamprologus_brichardi
ENSSBOG00000020632	PRPF6	95	92.881	ENSNLEG00000010208	PRPF6	100	92.881	Nomascus_leucogenys
ENSSBOG00000020632	PRPF6	100	80.449	ENSMEUG00000009824	-	80	100.000	Notamacropus_eugenii
ENSSBOG00000020632	PRPF6	91	95.398	ENSODEG00000004841	PRPF6	91	95.398	Octodon_degus
ENSSBOG00000020632	PRPF6	93	87.370	ENSONIG00000017406	prpf6	87	89.558	Oreochromis_niloticus
ENSSBOG00000020632	PRPF6	93	93.599	ENSOANG00000004920	PRPF6	91	93.599	Ornithorhynchus_anatinus
ENSSBOG00000020632	PRPF6	91	94.867	ENSOCUG00000014151	PRPF6	92	94.867	Oryctolagus_cuniculus
ENSSBOG00000020632	PRPF6	93	87.543	ENSORLG00000009592	prpf6	87	89.027	Oryzias_latipes
ENSSBOG00000020632	PRPF6	93	87.716	ENSORLG00020001458	prpf6	87	89.204	Oryzias_latipes_hni
ENSSBOG00000020632	PRPF6	93	87.716	ENSORLG00015018762	prpf6	87	89.204	Oryzias_latipes_hsok
ENSSBOG00000020632	PRPF6	93	87.543	ENSOMEG00000012174	prpf6	87	89.735	Oryzias_melastigma
ENSSBOG00000020632	PRPF6	93	81.520	ENSOGAG00000007573	PRPF6	91	82.862	Otolemur_garnettii
ENSSBOG00000020632	PRPF6	93	93.426	ENSOARG00000008776	PRPF6	91	93.426	Ovis_aries
ENSSBOG00000020632	PRPF6	95	95.254	ENSPPAG00000008686	PRPF6	100	95.254	Pan_paniscus
ENSSBOG00000020632	PRPF6	93	93.426	ENSPPRG00000008497	PRPF6	91	93.426	Panthera_pardus
ENSSBOG00000020632	PRPF6	93	93.426	ENSPTIG00000011184	PRPF6	91	93.426	Panthera_tigris_altaica
ENSSBOG00000020632	PRPF6	95	95.254	ENSPTRG00000013765	PRPF6	100	95.254	Pan_troglodytes
ENSSBOG00000020632	PRPF6	98	92.157	ENSPANG00000024135	PRPF6	91	95.044	Papio_anubis
ENSSBOG00000020632	PRPF6	93	88.754	ENSPKIG00000005627	prpf6	90	90.973	Paramormyrops_kingsleyae
ENSSBOG00000020632	PRPF6	93	93.426	ENSPSIG00000007717	PRPF6	97	93.426	Pelodiscus_sinensis
ENSSBOG00000020632	PRPF6	90	86.655	ENSPMGG00000008925	prpf6	86	88.160	Periophthalmus_magnuspinnatus
ENSSBOG00000020632	PRPF6	91	95.221	ENSPEMG00000016036	Prpf6	91	95.221	Peromyscus_maniculatus_bairdii
ENSSBOG00000020632	PRPF6	93	82.241	ENSPMAG00000006144	prpf6	89	84.392	Petromyzon_marinus
ENSSBOG00000020632	PRPF6	93	93.599	ENSPCIG00000017909	PRPF6	91	93.599	Phascolarctos_cinereus
ENSSBOG00000020632	PRPF6	93	87.716	ENSPFOG00000006431	prpf6	87	89.912	Poecilia_formosa
ENSSBOG00000020632	PRPF6	93	87.543	ENSPLAG00000005974	prpf6	87	89.735	Poecilia_latipinna
ENSSBOG00000020632	PRPF6	93	87.889	ENSPMEG00000009977	prpf6	87	90.088	Poecilia_mexicana
ENSSBOG00000020632	PRPF6	93	87.889	ENSPREG00000017993	prpf6	83	90.088	Poecilia_reticulata
ENSSBOG00000020632	PRPF6	91	94.513	ENSPPYG00000011256	PRPF6	91	94.513	Pongo_abelii
ENSSBOG00000020632	PRPF6	97	95.387	ENSPCAG00000006536	PRPF6	82	95.387	Procavia_capensis
ENSSBOG00000020632	PRPF6	97	93.344	ENSPCOG00000016881	PRPF6	91	95.221	Propithecus_coquereli
ENSSBOG00000020632	PRPF6	91	91.455	ENSPVAG00000014316	PRPF6	84	91.818	Pteropus_vampyrus
ENSSBOG00000020632	PRPF6	100	57.658	ENSPNYG00000001939	prpf6	67	89.869	Pundamilia_nyererei
ENSSBOG00000020632	PRPF6	90	88.612	ENSPNAG00000015606	prpf6	86	90.164	Pygocentrus_nattereri
ENSSBOG00000020632	PRPF6	91	95.398	ENSRNOG00000051498	Prpf6	91	95.398	Rattus_norvegicus
ENSSBOG00000020632	PRPF6	95	95.424	ENSRBIG00000043613	PRPF6	100	95.424	Rhinopithecus_bieti
ENSSBOG00000020632	PRPF6	95	95.424	ENSRROG00000040969	PRPF6	100	95.424	Rhinopithecus_roxellana
ENSSBOG00000020632	PRPF6	93	93.599	ENSSHAG00000016810	PRPF6	91	93.599	Sarcophilus_harrisii
ENSSBOG00000020632	PRPF6	93	89.273	ENSSFOG00015020859	prpf6	92	91.504	Scleropages_formosus
ENSSBOG00000020632	PRPF6	93	86.678	ENSSMAG00000008112	prpf6	87	88.142	Scophthalmus_maximus
ENSSBOG00000020632	PRPF6	93	87.370	ENSSDUG00000016142	prpf6	87	89.558	Seriola_dumerili
ENSSBOG00000020632	PRPF6	93	87.370	ENSSLDG00000025283	prpf6	91	89.558	Seriola_lalandi_dorsalis
ENSSBOG00000020632	PRPF6	93	92.561	ENSSPUG00000018260	PRPF6	97	92.561	Sphenodon_punctatus
ENSSBOG00000020632	PRPF6	93	87.543	ENSSPAG00000015850	prpf6	87	89.735	Stegastes_partitus
ENSSBOG00000020632	PRPF6	95	95.044	ENSSSCG00000029119	PRPF6	99	93.426	Sus_scrofa
ENSSBOG00000020632	PRPF6	93	93.080	ENSTGUG00000007221	PRPF6	90	93.080	Taeniopygia_guttata
ENSSBOG00000020632	PRPF6	90	87.544	ENSTRUG00000002920	prpf6	86	89.071	Takifugu_rubripes
ENSSBOG00000020632	PRPF6	90	77.072	ENSTNIG00000017873	prpf6	90	78.339	Tetraodon_nigroviridis
ENSSBOG00000020632	PRPF6	87	91.398	ENSTBEG00000005348	PRPF6	73	91.398	Tupaia_belangeri
ENSSBOG00000020632	PRPF6	91	94.690	ENSTTRG00000013068	PRPF6	91	94.690	Tursiops_truncatus
ENSSBOG00000020632	PRPF6	98	95.044	ENSUMAG00000021631	PRPF6	99	95.044	Ursus_maritimus
ENSSBOG00000020632	PRPF6	93	93.426	ENSVVUG00000014948	PRPF6	91	93.426	Vulpes_vulpes
ENSSBOG00000020632	PRPF6	93	89.965	ENSXETG00000012054	prpf6	88	92.212	Xenopus_tropicalis
ENSSBOG00000020632	PRPF6	93	87.889	ENSXCOG00000008082	prpf6	87	90.088	Xiphophorus_couchianus
ENSSBOG00000020632	PRPF6	93	87.889	ENSXMAG00000015581	prpf6	87	90.088	Xiphophorus_maculatus