EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000020719 (Gene tree)
Gene ID: 101046633
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 25792 bases
Position: chrJH378137.1:7345317-7371108
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000007891	ResIII	PF04851.15	2.4e-08	1	1
ENSSBOP00000007886	ResIII	PF04851.15	2.6e-08	1	1
ENSSBOP00000007815	ResIII	PF04851.15	2.7e-08	1	1
ENSSBOP00000007875	ResIII	PF04851.15	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000024644	CHD3-203	7068	XM_003929197	ENSSBOP00000007886	1966 (aa)	XP_003929246	A0A2K6SKI5
ENSSBOT00000024649	CHD3-204	5472	XM_010339807	ENSSBOP00000007891	1823 (aa)	XP_010338109	A0A2K6SKJ0
ENSSBOT00000024657	CHD3-205	1158	-	ENSSBOP00000007899	385 (aa)	-	A0A2K6SKI7
ENSSBOT00000024573	CHD3-201	5985	-	ENSSBOP00000007815	1994 (aa)	-	A0A2K6SKA6
ENSSBOT00000024632	CHD3-202	7170	XM_003929196	ENSSBOP00000007875	2000 (aa)	XP_003929245	A0A2K6SKG0

Gene Model

Click here to download ENSSBOG00000020719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000020719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000020719	CHD3	95	70.562	ENSSBOG00000020782	-	98	68.978
ENSSBOG00000020719	CHD3	97	65.871	ENSSBOG00000001955	CHD5	98	72.299
ENSSBOG00000020719	CHD3	51	37.134	ENSSBOG00000022089	CHD6	87	42.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000020719	CHD3	100	99.350	ENSG00000170004	CHD3	100	99.350	Homo_sapiens
ENSSBOG00000020719	CHD3	86	80.208	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSSBOG00000020719	CHD3	74	96.554	ENSAMEG00000003025	-	100	97.361	Ailuropoda_melanoleuca
ENSSBOG00000020719	CHD3	89	78.221	ENSACIG00000019671	chd3	99	83.516	Amphilophus_citrinellus
ENSSBOG00000020719	CHD3	91	81.100	ENSAOCG00000023784	chd3	97	81.675	Amphiprion_ocellaris
ENSSBOG00000020719	CHD3	91	80.756	ENSAPEG00000006341	chd3	95	77.728	Amphiprion_percula
ENSSBOG00000020719	CHD3	99	73.936	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSSBOG00000020719	CHD3	99	85.111	ENSACAG00000004276	CHD3	96	84.821	Anolis_carolinensis
ENSSBOG00000020719	CHD3	99	99.235	ENSANAG00000034323	CHD3	99	99.680	Aotus_nancymaae
ENSSBOG00000020719	CHD3	94	78.816	ENSACLG00000009222	chd3	99	74.856	Astatotilapia_calliptera
ENSSBOG00000020719	CHD3	99	97.653	ENSBTAG00000014377	CHD3	97	98.281	Bos_taurus
ENSSBOG00000020719	CHD3	100	99.550	ENSCJAG00000014766	CHD3	100	99.550	Callithrix_jacchus
ENSSBOG00000020719	CHD3	100	97.801	ENSCAFG00000016859	CHD3	100	97.801	Canis_familiaris
ENSSBOG00000020719	CHD3	99	97.925	ENSCAFG00020007422	CHD3	100	98.527	Canis_lupus_dingo
ENSSBOG00000020719	CHD3	99	98.434	ENSCHIG00000016737	CHD3	100	98.434	Capra_hircus
ENSSBOG00000020719	CHD3	100	98.678	ENSTSYG00000035658	CHD3	100	98.678	Carlito_syrichta
ENSSBOG00000020719	CHD3	99	94.921	ENSCAPG00000014864	CHD3	99	94.782	Cavia_aperea
ENSSBOG00000020719	CHD3	99	97.652	ENSCPOG00000022653	CHD3	99	97.291	Cavia_porcellus
ENSSBOG00000020719	CHD3	100	99.600	ENSCCAG00000034792	CHD3	100	99.600	Cebus_capucinus
ENSSBOG00000020719	CHD3	100	99.237	ENSCATG00000041717	CHD3	100	99.237	Cercocebus_atys
ENSSBOG00000020719	CHD3	99	97.979	ENSCLAG00000010523	CHD3	100	98.655	Chinchilla_lanigera
ENSSBOG00000020719	CHD3	99	98.634	ENSCSAG00000011122	CHD3	100	99.289	Chlorocebus_sabaeus
ENSSBOG00000020719	CHD3	92	86.101	ENSCPBG00000011966	CHD3	99	87.747	Chrysemys_picta_bellii
ENSSBOG00000020719	CHD3	100	99.135	ENSCANG00000037641	CHD3	100	99.135	Colobus_angolensis_palliatus
ENSSBOG00000020719	CHD3	99	96.889	ENSCGRG00001011306	Chd3	100	97.673	Cricetulus_griseus_chok1gshd
ENSSBOG00000020719	CHD3	93	97.794	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSSBOG00000020719	CHD3	92	79.605	ENSCSEG00000004489	chd3	99	76.156	Cynoglossus_semilaevis
ENSSBOG00000020719	CHD3	89	82.072	ENSCVAG00000007293	chd3	95	82.661	Cyprinodon_variegatus
ENSSBOG00000020719	CHD3	98	76.782	ENSDARG00000021405	chd3	99	76.514	Danio_rerio
ENSSBOG00000020719	CHD3	98	83.814	ENSDNOG00000047846	CHD3	98	83.814	Dasypus_novemcinctus
ENSSBOG00000020719	CHD3	99	97.322	ENSDORG00000010713	Chd3	100	98.033	Dipodomys_ordii
ENSSBOG00000020719	CHD3	98	92.686	ENSETEG00000017733	CHD3	100	92.112	Echinops_telfairi
ENSSBOG00000020719	CHD3	58	77.227	ENSEBUG00000008310	chd3	99	70.392	Eptatretus_burgeri
ENSSBOG00000020719	CHD3	99	98.307	ENSEASG00005019360	CHD3	100	98.909	Equus_asinus_asinus
ENSSBOG00000020719	CHD3	99	98.362	ENSECAG00000010051	CHD3	100	98.963	Equus_caballus
ENSSBOG00000020719	CHD3	92	98.305	ENSEEUG00000015205	CHD3	92	100.000	Erinaceus_europaeus
ENSSBOG00000020719	CHD3	84	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSSBOG00000020719	CHD3	99	97.929	ENSFCAG00000009629	CHD3	96	97.929	Felis_catus
ENSSBOG00000020719	CHD3	99	97.925	ENSFDAG00000008220	CHD3	99	96.240	Fukomys_damarensis
ENSSBOG00000020719	CHD3	90	79.391	ENSGMOG00000013599	chd3	91	80.914	Gadus_morhua
ENSSBOG00000020719	CHD3	59	77.058	ENSGAFG00000004055	chd3	99	76.581	Gambusia_affinis
ENSSBOG00000020719	CHD3	99	71.805	ENSGACG00000019275	chd3	100	70.997	Gasterosteus_aculeatus
ENSSBOG00000020719	CHD3	81	85.000	ENSGAGG00000013164	CHD3	98	87.169	Gopherus_agassizii
ENSSBOG00000020719	CHD3	100	99.200	ENSGGOG00000013496	CHD3	100	99.200	Gorilla_gorilla
ENSSBOG00000020719	CHD3	99	98.252	ENSHGLG00000012017	CHD3	99	97.497	Heterocephalus_glaber_female
ENSSBOG00000020719	CHD3	88	91.739	ENSHGLG00100013902	CHD3	99	91.739	Heterocephalus_glaber_male
ENSSBOG00000020719	CHD3	96	73.923	ENSHCOG00000010170	chd3	96	73.357	Hippocampus_comes
ENSSBOG00000020719	CHD3	90	79.986	ENSIPUG00000003271	chd3	96	80.919	Ictalurus_punctatus
ENSSBOG00000020719	CHD3	99	98.415	ENSSTOG00000025907	CHD3	100	99.017	Ictidomys_tridecemlineatus
ENSSBOG00000020719	CHD3	99	97.051	ENSJJAG00000017633	Chd3	100	97.775	Jaculus_jaculus
ENSSBOG00000020719	CHD3	87	90.047	ENSKMAG00000019292	chd3	97	75.957	Kryptolebias_marmoratus
ENSSBOG00000020719	CHD3	93	73.662	ENSLBEG00000028485	chd3	92	81.008	Labrus_bergylta
ENSSBOG00000020719	CHD3	98	75.000	ENSLACG00000008031	CHD3	99	74.748	Latimeria_chalumnae
ENSSBOG00000020719	CHD3	99	77.901	ENSLOCG00000013965	chd3	97	77.199	Lepisosteus_oculatus
ENSSBOG00000020719	CHD3	94	94.436	ENSLAFG00000000572	CHD3	100	94.436	Loxodonta_africana
ENSSBOG00000020719	CHD3	100	99.186	ENSMFAG00000020113	CHD3	100	99.186	Macaca_fascicularis
ENSSBOG00000020719	CHD3	100	96.750	ENSMMUG00000022221	CHD3	100	96.750	Macaca_mulatta
ENSSBOG00000020719	CHD3	100	99.287	ENSMNEG00000001728	CHD3	100	99.287	Macaca_nemestrina
ENSSBOG00000020719	CHD3	100	99.237	ENSMLEG00000032249	CHD3	100	99.237	Mandrillus_leucophaeus
ENSSBOG00000020719	CHD3	92	75.103	ENSMAMG00000000564	chd3	99	77.466	Mastacembelus_armatus
ENSSBOG00000020719	CHD3	99	97.071	ENSMAUG00000013873	Chd3	98	95.736	Mesocricetus_auratus
ENSSBOG00000020719	CHD3	99	98.362	ENSMICG00000008741	CHD3	100	95.464	Microcebus_murinus
ENSSBOG00000020719	CHD3	99	96.943	ENSMOCG00000004848	Chd3	100	97.719	Microtus_ochrogaster
ENSSBOG00000020719	CHD3	98	74.764	ENSMMOG00000012699	chd3	99	74.094	Mola_mola
ENSSBOG00000020719	CHD3	99	92.249	ENSMODG00000007509	CHD3	100	94.611	Monodelphis_domestica
ENSSBOG00000020719	CHD3	99	97.125	MGP_CAROLIEiJ_G0016564	Chd3	100	97.561	Mus_caroli
ENSSBOG00000020719	CHD3	99	97.228	ENSMUSG00000018474	Chd3	99	97.667	Mus_musculus
ENSSBOG00000020719	CHD3	99	97.329	MGP_PahariEiJ_G0017695	Chd3	100	97.772	Mus_pahari
ENSSBOG00000020719	CHD3	99	97.228	MGP_SPRETEiJ_G0017400	Chd3	100	97.667	Mus_spretus
ENSSBOG00000020719	CHD3	93	97.608	ENSMPUG00000008861	CHD3	100	98.250	Mustela_putorius_furo
ENSSBOG00000020719	CHD3	100	96.903	ENSMLUG00000014643	-	100	96.903	Myotis_lucifugus
ENSSBOG00000020719	CHD3	99	97.433	ENSNGAG00000000773	Chd3	98	97.967	Nannospalax_galili
ENSSBOG00000020719	CHD3	92	74.956	ENSNBRG00000000636	chd3	98	76.075	Neolamprologus_brichardi
ENSSBOG00000020719	CHD3	98	96.417	ENSNLEG00000009770	CHD3	100	96.417	Nomascus_leucogenys
ENSSBOG00000020719	CHD3	87	91.484	ENSMEUG00000005852	CHD3	87	91.484	Notamacropus_eugenii
ENSSBOG00000020719	CHD3	99	96.230	ENSOPRG00000011069	CHD3	100	96.902	Ochotona_princeps
ENSSBOG00000020719	CHD3	99	97.688	ENSODEG00000017785	CHD3	100	97.688	Octodon_degus
ENSSBOG00000020719	CHD3	98	75.452	ENSONIG00000009292	chd3	100	75.000	Oreochromis_niloticus
ENSSBOG00000020719	CHD3	99	92.931	ENSOCUG00000029299	CHD3	100	93.795	Oryctolagus_cuniculus
ENSSBOG00000020719	CHD3	84	71.013	ENSORLG00000007107	chd3	93	71.973	Oryzias_latipes
ENSSBOG00000020719	CHD3	56	75.411	ENSORLG00020008387	chd3	95	73.786	Oryzias_latipes_hni
ENSSBOG00000020719	CHD3	76	79.672	ENSOMEG00000013691	chd3	99	78.367	Oryzias_melastigma
ENSSBOG00000020719	CHD3	99	97.870	ENSOGAG00000003216	CHD3	100	98.477	Otolemur_garnettii
ENSSBOG00000020719	CHD3	99	95.604	ENSOARG00000017855	CHD3	99	95.604	Ovis_aries
ENSSBOG00000020719	CHD3	100	96.994	ENSPPAG00000032886	CHD3	100	96.994	Pan_paniscus
ENSSBOG00000020719	CHD3	99	97.925	ENSPPRG00000000626	CHD3	99	97.699	Panthera_pardus
ENSSBOG00000020719	CHD3	100	99.400	ENSPTRG00000008714	CHD3	100	99.400	Pan_troglodytes
ENSSBOG00000020719	CHD3	100	99.150	ENSPANG00000023938	CHD3	100	99.150	Papio_anubis
ENSSBOG00000020719	CHD3	97	78.638	ENSPKIG00000006305	chd3	99	79.409	Paramormyrops_kingsleyae
ENSSBOG00000020719	CHD3	59	90.602	ENSPSIG00000010177	CHD3	98	90.876	Pelodiscus_sinensis
ENSSBOG00000020719	CHD3	99	96.924	ENSPEMG00000014262	Chd3	100	96.924	Peromyscus_maniculatus_bairdii
ENSSBOG00000020719	CHD3	99	93.096	ENSPCIG00000005442	CHD3	97	95.935	Phascolarctos_cinereus
ENSSBOG00000020719	CHD3	94	71.631	ENSPFOG00000012464	chd3	87	80.135	Poecilia_formosa
ENSSBOG00000020719	CHD3	89	83.534	ENSPLAG00000002887	chd3	96	83.534	Poecilia_latipinna
ENSSBOG00000020719	CHD3	53	81.374	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSSBOG00000020719	CHD3	91	84.502	ENSPREG00000011044	chd3	99	78.006	Poecilia_reticulata
ENSSBOG00000020719	CHD3	99	96.175	ENSPPYG00000007940	CHD3	100	94.450	Pongo_abelii
ENSSBOG00000020719	CHD3	96	98.000	ENSPCAG00000004350	CHD3	96	97.761	Procavia_capensis
ENSSBOG00000020719	CHD3	100	98.102	ENSPCOG00000020952	CHD3	100	98.102	Propithecus_coquereli
ENSSBOG00000020719	CHD3	86	98.906	ENSPVAG00000016344	CHD3	87	97.565	Pteropus_vampyrus
ENSSBOG00000020719	CHD3	95	79.580	ENSPNAG00000020393	chd3	98	81.611	Pygocentrus_nattereri
ENSSBOG00000020719	CHD3	99	96.347	ENSRNOG00000009722	Chd3	100	96.950	Rattus_norvegicus
ENSSBOG00000020719	CHD3	100	96.160	ENSRBIG00000033562	CHD3	100	96.160	Rhinopithecus_bieti
ENSSBOG00000020719	CHD3	100	99.237	ENSRROG00000029554	CHD3	100	99.237	Rhinopithecus_roxellana
ENSSBOG00000020719	CHD3	98	94.964	ENSSHAG00000014412	CHD3	100	94.964	Sarcophilus_harrisii
ENSSBOG00000020719	CHD3	94	80.273	ENSSFOG00015023123	chd3	98	75.661	Scleropages_formosus
ENSSBOG00000020719	CHD3	84	91.304	ENSSMAG00000006451	chd3	99	77.237	Scophthalmus_maximus
ENSSBOG00000020719	CHD3	55	75.025	ENSSDUG00000005792	chd3	95	73.535	Seriola_dumerili
ENSSBOG00000020719	CHD3	91	80.756	ENSSPAG00000013694	chd3	98	81.053	Stegastes_partitus
ENSSBOG00000020719	CHD3	99	98.377	ENSSSCG00000021363	CHD3	100	98.419	Sus_scrofa
ENSSBOG00000020719	CHD3	76	77.314	ENSTRUG00000014990	chd3	89	76.335	Takifugu_rubripes
ENSSBOG00000020719	CHD3	99	73.755	ENSTNIG00000012998	chd3	99	73.202	Tetraodon_nigroviridis
ENSSBOG00000020719	CHD3	69	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSSBOG00000020719	CHD3	99	100.000	ENSTTRG00000010295	CHD3	97	99.383	Tursiops_truncatus
ENSSBOG00000020719	CHD3	99	96.681	ENSUAMG00000005475	CHD3	100	96.681	Ursus_americanus
ENSSBOG00000020719	CHD3	59	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSSBOG00000020719	CHD3	99	97.925	ENSVVUG00000028011	CHD3	99	98.402	Vulpes_vulpes
ENSSBOG00000020719	CHD3	99	73.294	ENSXETG00000012991	chd3	97	71.287	Xenopus_tropicalis
ENSSBOG00000020719	CHD3	50	91.429	ENSXCOG00000000809	chd3	96	83.089	Xiphophorus_couchianus
ENSSBOG00000020719	CHD3	87	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus