EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000020828 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 583 bases
Position: chrJH378120.1:18833563-18834145
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000007788	PABP	PF00658.18	2.2e-12	1	1
ENSSBOP00000007781	PABP	PF00658.18	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000024546	-	435	-	ENSSBOP00000007788	144 (aa)	-	A0A2K6SK76
ENSSBOT00000024539	-	429	-	ENSSBOP00000007781	142 (aa)	-	A0A2K6SK75

Gene Model

Click here to download ENSSBOG00000020828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000020828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000020828	-	100	80.357	ENSSBOG00000009532	-	98	79.762
ENSSBOG00000020828	-	89	47.879	ENSSBOG00000022216	PABPC1	58	47.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000020828	-	92	77.564	ENSG00000101104	PABPC1L	100	76.190	Homo_sapiens
ENSSBOG00000020828	-	100	80.357	ENSANAG00000026826	PABPC1L	98	79.762	Aotus_nancymaae
ENSSBOG00000020828	-	98	60.000	ENSBTAG00000050862	-	90	60.000	Bos_taurus
ENSSBOG00000020828	-	100	80.952	ENSCJAG00000017628	PABPC1L	99	79.054	Callithrix_jacchus
ENSSBOG00000020828	-	100	68.452	ENSTSYG00000006645	PABPC1L	99	66.892	Carlito_syrichta
ENSSBOG00000020828	-	100	79.762	ENSCCAG00000023338	PABPC1L	99	79.054	Cebus_capucinus
ENSSBOG00000020828	-	92	75.641	ENSCATG00000034065	PABPC1L	99	73.649	Cercocebus_atys
ENSSBOG00000020828	-	80	45.652	ENSCPBG00000017765	-	78	45.652	Chrysemys_picta_bellii
ENSSBOG00000020828	-	92	74.242	ENSCANG00000037530	PABPC1L	98	72.917	Colobus_angolensis_palliatus
ENSSBOG00000020828	-	88	61.333	ENSEASG00005023406	-	93	61.333	Equus_asinus_asinus
ENSSBOG00000020828	-	100	60.714	ENSECAG00000022681	PABPC1L	100	60.714	Equus_caballus
ENSSBOG00000020828	-	91	77.419	ENSGGOG00000004584	PABPC1L	98	75.000	Gorilla_gorilla
ENSSBOG00000020828	-	92	77.564	ENSMFAG00000040365	PABPC1L	98	75.641	Macaca_fascicularis
ENSSBOG00000020828	-	83	76.389	ENSMMUG00000013209	-	99	75.000	Macaca_mulatta
ENSSBOG00000020828	-	92	72.327	ENSMNEG00000032298	PABPC1L	98	77.622	Macaca_nemestrina
ENSSBOG00000020828	-	92	75.641	ENSMLEG00000043139	PABPC1L	99	73.649	Mandrillus_leucophaeus
ENSSBOG00000020828	-	97	68.098	ENSMICG00000000974	-	99	68.098	Microcebus_murinus
ENSSBOG00000020828	-	92	77.070	ENSNLEG00000006653	-	100	76.190	Nomascus_leucogenys
ENSSBOG00000020828	-	92	77.564	ENSPPAG00000039677	PABPC1L	98	76.190	Pan_paniscus
ENSSBOG00000020828	-	87	61.486	ENSPPRG00000020242	-	99	63.014	Panthera_pardus
ENSSBOG00000020828	-	92	77.564	ENSPTRG00000044192	-	100	76.190	Pan_troglodytes
ENSSBOG00000020828	-	92	75.641	ENSPANG00000018788	PABPC1L	99	73.649	Papio_anubis
ENSSBOG00000020828	-	92	66.026	ENSPCOG00000020630	PABPC1L	99	66.216	Propithecus_coquereli
ENSSBOG00000020828	-	92	75.641	ENSRBIG00000035381	PABPC1L	99	72.973	Rhinopithecus_bieti
ENSSBOG00000020828	-	92	76.282	ENSRROG00000044498	PABPC1L	99	73.649	Rhinopithecus_roxellana
ENSSBOG00000020828	-	86	60.959	ENSUAMG00000017682	PABPC1L	96	61.905	Ursus_americanus