EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000020830 (Gene tree)
Gene ID: 101046181
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 45874 bases
Position: chrJH378277.1:2643387-2689260
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000007791	POP1	PF06978.11	2.3e-36	1	2
ENSSBOP00000007791	POP1	PF06978.11	2.3e-36	2	2
ENSSBOP00000007791	POPLD	PF08170.12	5.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000024549	POP1-201	4768	XM_003943037	ENSSBOP00000007791	1011 (aa)	XP_003943086	A0A2K6SK84

Gene Model

Click here to download ENSSBOG00000020830's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03008	Ribosome biogenesis in eukaryotes	KEGG
sbq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000020830's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000020830	POP1	100	93.874	ENSG00000104356	POP1	99	93.874	Homo_sapiens
ENSSBOG00000020830	POP1	100	47.583	ENSAPOG00000008198	pop1	99	47.583	Acanthochromis_polyacanthus
ENSSBOG00000020830	POP1	100	79.961	ENSAMEG00000000556	POP1	99	79.961	Ailuropoda_melanoleuca
ENSSBOG00000020830	POP1	91	48.990	ENSACIG00000004169	POP1	93	48.887	Amphilophus_citrinellus
ENSSBOG00000020830	POP1	100	46.947	ENSAOCG00000010991	pop1	99	47.233	Amphiprion_ocellaris
ENSSBOG00000020830	POP1	92	46.791	ENSAPEG00000007607	pop1	96	47.412	Amphiprion_percula
ENSSBOG00000020830	POP1	100	45.687	ENSATEG00000024814	POP1	99	45.845	Anabas_testudineus
ENSSBOG00000020830	POP1	93	62.069	ENSAPLG00000014418	POP1	100	62.069	Anas_platyrhynchos
ENSSBOG00000020830	POP1	99	56.696	ENSACAG00000016083	POP1	99	56.683	Anolis_carolinensis
ENSSBOG00000020830	POP1	89	95.470	ENSANAG00000026360	POP1	99	95.470	Aotus_nancymaae
ENSSBOG00000020830	POP1	94	52.762	ENSACLG00000010951	pop1	99	47.048	Astatotilapia_calliptera
ENSSBOG00000020830	POP1	100	44.734	ENSAMXG00000014483	POP1	99	44.403	Astyanax_mexicanus
ENSSBOG00000020830	POP1	100	79.249	ENSBTAG00000012596	POP1	99	80.040	Bos_taurus
ENSSBOG00000020830	POP1	53	33.462	WBGene00015486	C05D11.9	64	33.462	Caenorhabditis_elegans
ENSSBOG00000020830	POP1	100	95.356	ENSCJAG00000015567	POP1	99	95.356	Callithrix_jacchus
ENSSBOG00000020830	POP1	100	80.712	ENSCAFG00000000469	POP1	99	80.712	Canis_familiaris
ENSSBOG00000020830	POP1	100	81.818	ENSCAFG00020026765	POP1	99	81.818	Canis_lupus_dingo
ENSSBOG00000020830	POP1	100	79.566	ENSCHIG00000017066	POP1	99	79.961	Capra_hircus
ENSSBOG00000020830	POP1	100	85.771	ENSTSYG00000003097	POP1	99	85.771	Carlito_syrichta
ENSSBOG00000020830	POP1	100	77.362	ENSCAPG00000007251	POP1	99	77.362	Cavia_aperea
ENSSBOG00000020830	POP1	100	80.317	ENSCPOG00000002901	POP1	99	80.317	Cavia_porcellus
ENSSBOG00000020830	POP1	100	95.257	ENSCCAG00000018939	POP1	99	95.257	Cebus_capucinus
ENSSBOG00000020830	POP1	100	93.478	ENSCATG00000040916	POP1	99	93.478	Cercocebus_atys
ENSSBOG00000020830	POP1	100	82.312	ENSCLAG00000007208	POP1	96	82.312	Chinchilla_lanigera
ENSSBOG00000020830	POP1	91	92.733	ENSCSAG00000012340	POP1	99	92.733	Chlorocebus_sabaeus
ENSSBOG00000020830	POP1	96	78.484	ENSCHOG00000011432	POP1	100	78.484	Choloepus_hoffmanni
ENSSBOG00000020830	POP1	100	65.358	ENSCPBG00000006373	POP1	99	65.456	Chrysemys_picta_bellii
ENSSBOG00000020830	POP1	83	38.132	ENSCING00000008323	-	90	36.749	Ciona_intestinalis
ENSSBOG00000020830	POP1	100	93.775	ENSCANG00000001647	POP1	99	93.775	Colobus_angolensis_palliatus
ENSSBOG00000020830	POP1	100	76.680	ENSCGRG00001017308	Pop1	99	76.680	Cricetulus_griseus_chok1gshd
ENSSBOG00000020830	POP1	100	70.949	ENSCGRG00000010824	Pop1	99	70.949	Cricetulus_griseus_crigri
ENSSBOG00000020830	POP1	100	46.058	ENSCSEG00000008737	POP1	99	46.250	Cynoglossus_semilaevis
ENSSBOG00000020830	POP1	100	46.679	ENSCVAG00000022248	pop1	99	46.532	Cyprinodon_variegatus
ENSSBOG00000020830	POP1	100	77.026	ENSDNOG00000019974	POP1	99	77.026	Dasypus_novemcinctus
ENSSBOG00000020830	POP1	100	72.332	ENSDORG00000015384	Pop1	99	71.838	Dipodomys_ordii
ENSSBOG00000020830	POP1	62	32.188	FBgn0026702	l(1)G0045	78	30.066	Drosophila_melanogaster
ENSSBOG00000020830	POP1	89	70.430	ENSETEG00000007839	POP1	87	70.430	Echinops_telfairi
ENSSBOG00000020830	POP1	100	83.103	ENSEASG00005003189	POP1	97	83.103	Equus_asinus_asinus
ENSSBOG00000020830	POP1	100	83.103	ENSECAG00000024236	POP1	99	83.103	Equus_caballus
ENSSBOG00000020830	POP1	68	80.556	ENSEEUG00000003050	-	70	80.556	Erinaceus_europaeus
ENSSBOG00000020830	POP1	100	47.059	ENSELUG00000003526	pop1	99	47.206	Esox_lucius
ENSSBOG00000020830	POP1	100	83.300	ENSFCAG00000002168	POP1	99	83.300	Felis_catus
ENSSBOG00000020830	POP1	100	59.902	ENSFALG00000005711	POP1	99	59.902	Ficedula_albicollis
ENSSBOG00000020830	POP1	100	82.115	ENSFDAG00000017068	POP1	99	82.115	Fukomys_damarensis
ENSSBOG00000020830	POP1	94	47.508	ENSFHEG00000019518	pop1	96	47.915	Fundulus_heteroclitus
ENSSBOG00000020830	POP1	93	46.130	ENSGMOG00000000659	POP1	97	46.336	Gadus_morhua
ENSSBOG00000020830	POP1	100	47.384	ENSGAFG00000019770	POP1	99	47.384	Gambusia_affinis
ENSSBOG00000020830	POP1	100	46.006	ENSGACG00000003499	pop1	99	45.910	Gasterosteus_aculeatus
ENSSBOG00000020830	POP1	100	64.125	ENSGAGG00000011737	POP1	97	63.539	Gopherus_agassizii
ENSSBOG00000020830	POP1	100	93.775	ENSGGOG00000003176	POP1	99	93.775	Gorilla_gorilla
ENSSBOG00000020830	POP1	100	47.278	ENSHBUG00000021583	pop1	99	47.137	Haplochromis_burtoni
ENSSBOG00000020830	POP1	100	81.028	ENSHGLG00000006029	POP1	99	81.028	Heterocephalus_glaber_female
ENSSBOG00000020830	POP1	100	81.028	ENSHGLG00100016879	POP1	99	81.028	Heterocephalus_glaber_male
ENSSBOG00000020830	POP1	91	49.200	ENSHCOG00000013888	pop1	96	49.200	Hippocampus_comes
ENSSBOG00000020830	POP1	100	44.434	ENSIPUG00000018336	pop1	90	62.651	Ictalurus_punctatus
ENSSBOG00000020830	POP1	100	82.905	ENSSTOG00000011455	POP1	96	82.905	Ictidomys_tridecemlineatus
ENSSBOG00000020830	POP1	100	77.745	ENSJJAG00000013325	Pop1	99	77.745	Jaculus_jaculus
ENSSBOG00000020830	POP1	93	48.175	ENSKMAG00000001346	POP1	99	46.854	Kryptolebias_marmoratus
ENSSBOG00000020830	POP1	90	47.727	ENSLBEG00000024457	POP1	95	47.558	Labrus_bergylta
ENSSBOG00000020830	POP1	94	55.992	ENSLACG00000012498	POP1	99	55.700	Latimeria_chalumnae
ENSSBOG00000020830	POP1	100	50.584	ENSLOCG00000009817	POP1	99	50.877	Lepisosteus_oculatus
ENSSBOG00000020830	POP1	100	82.579	ENSLAFG00000010770	POP1	99	82.579	Loxodonta_africana
ENSSBOG00000020830	POP1	100	93.577	ENSMFAG00000000347	POP1	99	93.577	Macaca_fascicularis
ENSSBOG00000020830	POP1	100	93.281	ENSMNEG00000036870	POP1	99	93.281	Macaca_nemestrina
ENSSBOG00000020830	POP1	100	93.281	ENSMLEG00000034986	POP1	99	93.281	Mandrillus_leucophaeus
ENSSBOG00000020830	POP1	100	46.425	ENSMAMG00000004040	pop1	99	46.991	Mastacembelus_armatus
ENSSBOG00000020830	POP1	100	47.188	ENSMZEG00005025448	pop1	99	47.048	Maylandia_zebra
ENSSBOG00000020830	POP1	100	56.897	ENSMGAG00000012167	POP1	99	57.824	Meleagris_gallopavo
ENSSBOG00000020830	POP1	100	76.209	ENSMAUG00000017537	Pop1	99	76.209	Mesocricetus_auratus
ENSSBOG00000020830	POP1	100	86.166	ENSMICG00000004361	POP1	99	86.166	Microcebus_murinus
ENSSBOG00000020830	POP1	100	75.173	ENSMOCG00000006356	Pop1	99	76.063	Microtus_ochrogaster
ENSSBOG00000020830	POP1	93	46.251	ENSMMOG00000018242	pop1	95	46.251	Mola_mola
ENSSBOG00000020830	POP1	100	70.029	ENSMODG00000006561	POP1	99	70.029	Monodelphis_domestica
ENSSBOG00000020830	POP1	93	49.739	ENSMALG00000012621	POP1	93	49.948	Monopterus_albus
ENSSBOG00000020830	POP1	100	76.482	MGP_CAROLIEiJ_G0019726	Pop1	99	76.482	Mus_caroli
ENSSBOG00000020830	POP1	100	76.877	ENSMUSG00000022325	Pop1	99	76.877	Mus_musculus
ENSSBOG00000020830	POP1	100	76.285	MGP_PahariEiJ_G0019735	Pop1	99	76.285	Mus_pahari
ENSSBOG00000020830	POP1	100	76.383	MGP_SPRETEiJ_G0020622	Pop1	99	76.383	Mus_spretus
ENSSBOG00000020830	POP1	100	82.087	ENSMPUG00000015250	POP1	99	81.201	Mustela_putorius_furo
ENSSBOG00000020830	POP1	100	76.802	ENSMLUG00000010204	POP1	99	76.900	Myotis_lucifugus
ENSSBOG00000020830	POP1	100	81.324	ENSNGAG00000001582	Pop1	99	81.324	Nannospalax_galili
ENSSBOG00000020830	POP1	90	47.854	ENSNBRG00000002356	pop1	94	48.038	Neolamprologus_brichardi
ENSSBOG00000020830	POP1	100	93.182	ENSNLEG00000002541	POP1	99	93.182	Nomascus_leucogenys
ENSSBOG00000020830	POP1	94	61.546	ENSMEUG00000003118	POP1	98	61.546	Notamacropus_eugenii
ENSSBOG00000020830	POP1	100	78.239	ENSOPRG00000007667	POP1	99	78.140	Ochotona_princeps
ENSSBOG00000020830	POP1	100	79.586	ENSODEG00000003984	POP1	99	79.586	Octodon_degus
ENSSBOG00000020830	POP1	100	47.876	ENSONIG00000016445	pop1	99	47.876	Oreochromis_niloticus
ENSSBOG00000020830	POP1	59	71.053	ENSOANG00000001278	-	92	71.053	Ornithorhynchus_anatinus
ENSSBOG00000020830	POP1	100	81.514	ENSOCUG00000017400	POP1	99	81.514	Oryctolagus_cuniculus
ENSSBOG00000020830	POP1	93	49.478	ENSORLG00000002839	pop1	95	49.583	Oryzias_latipes
ENSSBOG00000020830	POP1	91	49.038	ENSORLG00020022450	POP1	96	49.308	Oryzias_latipes_hni
ENSSBOG00000020830	POP1	93	49.687	ENSORLG00015012746	POP1	94	49.635	Oryzias_latipes_hsok
ENSSBOG00000020830	POP1	92	50.159	ENSOMEG00000006915	pop1	93	49.734	Oryzias_melastigma
ENSSBOG00000020830	POP1	100	83.696	ENSOGAG00000001466	POP1	99	83.696	Otolemur_garnettii
ENSSBOG00000020830	POP1	100	93.972	ENSPPAG00000018410	POP1	99	93.972	Pan_paniscus
ENSSBOG00000020830	POP1	100	83.218	ENSPPRG00000005002	POP1	99	83.218	Panthera_pardus
ENSSBOG00000020830	POP1	100	83.613	ENSPTIG00000016527	POP1	99	83.613	Panthera_tigris_altaica
ENSSBOG00000020830	POP1	100	94.170	ENSPTRG00000020458	POP1	99	94.170	Pan_troglodytes
ENSSBOG00000020830	POP1	100	92.984	ENSPANG00000009704	POP1	99	92.984	Papio_anubis
ENSSBOG00000020830	POP1	100	49.516	ENSPKIG00000016325	POP1	99	49.419	Paramormyrops_kingsleyae
ENSSBOG00000020830	POP1	100	62.574	ENSPSIG00000012343	POP1	99	62.574	Pelodiscus_sinensis
ENSSBOG00000020830	POP1	91	48.608	ENSPMGG00000022253	POP1	95	48.827	Periophthalmus_magnuspinnatus
ENSSBOG00000020830	POP1	100	75.508	ENSPEMG00000023633	Pop1	99	75.508	Peromyscus_maniculatus_bairdii
ENSSBOG00000020830	POP1	91	43.446	ENSPMAG00000003209	POP1	100	43.776	Petromyzon_marinus
ENSSBOG00000020830	POP1	100	68.262	ENSPCIG00000012216	POP1	99	68.262	Phascolarctos_cinereus
ENSSBOG00000020830	POP1	100	48.249	ENSPFOG00000012490	POP1	99	48.054	Poecilia_formosa
ENSSBOG00000020830	POP1	100	48.101	ENSPLAG00000004646	POP1	99	47.907	Poecilia_latipinna
ENSSBOG00000020830	POP1	100	48.350	ENSPMEG00000019592	POP1	99	48.155	Poecilia_mexicana
ENSSBOG00000020830	POP1	100	48.256	ENSPREG00000020951	POP1	99	48.062	Poecilia_reticulata
ENSSBOG00000020830	POP1	100	93.972	ENSPPYG00000018777	POP1	99	93.972	Pongo_abelii
ENSSBOG00000020830	POP1	100	75.420	ENSPCAG00000016662	POP1	99	74.531	Procavia_capensis
ENSSBOG00000020830	POP1	100	86.561	ENSPCOG00000019420	POP1	99	86.561	Propithecus_coquereli
ENSSBOG00000020830	POP1	100	81.441	ENSPVAG00000014468	POP1	99	81.441	Pteropus_vampyrus
ENSSBOG00000020830	POP1	90	48.065	ENSPNYG00000004476	pop1	99	47.118	Pundamilia_nyererei
ENSSBOG00000020830	POP1	100	45.387	ENSPNAG00000000265	pop1	99	45.260	Pygocentrus_nattereri
ENSSBOG00000020830	POP1	100	76.680	ENSRNOG00000005243	Pop1	99	76.680	Rattus_norvegicus
ENSSBOG00000020830	POP1	100	93.577	ENSRBIG00000007996	POP1	99	93.577	Rhinopithecus_bieti
ENSSBOG00000020830	POP1	100	93.775	ENSRROG00000012334	POP1	99	93.775	Rhinopithecus_roxellana
ENSSBOG00000020830	POP1	100	68.725	ENSSHAG00000000296	POP1	99	68.725	Sarcophilus_harrisii
ENSSBOG00000020830	POP1	100	47.002	ENSSFOG00015007429	pop1	97	46.905	Scleropages_formosus
ENSSBOG00000020830	POP1	87	52.761	ENSSMAG00000010467	POP1	98	47.893	Scophthalmus_maximus
ENSSBOG00000020830	POP1	100	46.337	ENSSDUG00000007817	POP1	99	46.711	Seriola_dumerili
ENSSBOG00000020830	POP1	100	46.622	ENSSLDG00000012565	POP1	99	47.009	Seriola_lalandi_dorsalis
ENSSBOG00000020830	POP1	100	59.037	ENSSPUG00000003550	-	99	59.372	Sphenodon_punctatus
ENSSBOG00000020830	POP1	91	49.677	ENSSPAG00000014955	pop1	94	49.194	Stegastes_partitus
ENSSBOG00000020830	POP1	100	80.731	ENSSSCG00000006078	POP1	99	80.731	Sus_scrofa
ENSSBOG00000020830	POP1	93	56.674	ENSTGUG00000012011	-	100	56.992	Taeniopygia_guttata
ENSSBOG00000020830	POP1	92	48.051	ENSTRUG00000010856	pop1	94	47.734	Takifugu_rubripes
ENSSBOG00000020830	POP1	94	47.449	ENSTNIG00000013297	pop1	99	47.996	Tetraodon_nigroviridis
ENSSBOG00000020830	POP1	96	79.939	ENSTBEG00000014214	POP1	100	79.939	Tupaia_belangeri
ENSSBOG00000020830	POP1	100	79.447	ENSTTRG00000016071	POP1	99	79.447	Tursiops_truncatus
ENSSBOG00000020830	POP1	100	78.085	ENSUAMG00000017309	POP1	100	78.085	Ursus_americanus
ENSSBOG00000020830	POP1	91	90.638	ENSUMAG00000016952	POP1	99	90.638	Ursus_maritimus
ENSSBOG00000020830	POP1	82	88.550	ENSVPAG00000008278	POP1	81	88.550	Vicugna_pacos
ENSSBOG00000020830	POP1	100	82.016	ENSVVUG00000010994	POP1	99	82.016	Vulpes_vulpes
ENSSBOG00000020830	POP1	90	45.405	ENSXCOG00000017043	POP1	90	45.455	Xiphophorus_couchianus
ENSSBOG00000020830	POP1	100	47.415	ENSXMAG00000002472	POP1	99	47.220	Xiphophorus_maculatus