EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000021014 (Gene tree)
Gene ID: 101047908
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 92815 bases
Position: chrJH378159.1:1033758-1126572
Accession: 12836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000008199	XRN_N	PF03159.18	2e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000024957	XRN2-201	3762	XM_003933152	ENSSBOP00000008199	950 (aa)	XP_003933201	A0A2K6SLD2

Gene Model

Click here to download ENSSBOG00000021014's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03008	Ribosome biogenesis in eukaryotes	KEGG
sbq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000021014's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000021014	XRN2	100	98.947	ENSG00000088930	XRN2	100	98.947	Homo_sapiens
ENSSBOG00000021014	XRN2	97	71.596	ENSAPOG00000009818	xrn2	100	70.438	Acanthochromis_polyacanthus
ENSSBOG00000021014	XRN2	100	97.895	ENSAMEG00000012581	XRN2	100	97.895	Ailuropoda_melanoleuca
ENSSBOG00000021014	XRN2	90	70.648	ENSACIG00000015047	xrn2	95	74.664	Amphilophus_citrinellus
ENSSBOG00000021014	XRN2	97	72.115	ENSAOCG00000023632	xrn2	100	70.964	Amphiprion_ocellaris
ENSSBOG00000021014	XRN2	97	71.945	ENSAPEG00000014871	xrn2	100	70.774	Amphiprion_percula
ENSSBOG00000021014	XRN2	95	71.506	ENSATEG00000001273	xrn2	97	70.825	Anabas_testudineus
ENSSBOG00000021014	XRN2	97	83.100	ENSAPLG00000013869	XRN2	99	83.531	Anas_platyrhynchos
ENSSBOG00000021014	XRN2	100	80.745	ENSACAG00000005565	XRN2	100	80.745	Anolis_carolinensis
ENSSBOG00000021014	XRN2	100	99.474	ENSANAG00000020126	XRN2	100	99.474	Aotus_nancymaae
ENSSBOG00000021014	XRN2	90	73.757	ENSACLG00000010522	xrn2	96	75.833	Astatotilapia_calliptera
ENSSBOG00000021014	XRN2	100	71.356	ENSAMXG00000018301	xrn2	100	71.356	Astyanax_mexicanus
ENSSBOG00000021014	XRN2	100	95.689	ENSBTAG00000011304	XRN2	100	95.689	Bos_taurus
ENSSBOG00000021014	XRN2	87	56.163	WBGene00006964	xrn-2	89	55.543	Caenorhabditis_elegans
ENSSBOG00000021014	XRN2	100	99.368	ENSCJAG00000005611	XRN2	100	99.368	Callithrix_jacchus
ENSSBOG00000021014	XRN2	100	97.789	ENSCAFG00000005185	XRN2	100	97.789	Canis_familiaris
ENSSBOG00000021014	XRN2	100	97.789	ENSCAFG00020027479	XRN2	100	97.789	Canis_lupus_dingo
ENSSBOG00000021014	XRN2	100	96.215	ENSCHIG00000006921	XRN2	100	96.215	Capra_hircus
ENSSBOG00000021014	XRN2	100	96.947	ENSTSYG00000008315	XRN2	100	96.947	Carlito_syrichta
ENSSBOG00000021014	XRN2	97	81.985	ENSCAPG00000010773	XRN2	99	81.877	Cavia_aperea
ENSSBOG00000021014	XRN2	100	97.263	ENSCPOG00000009407	XRN2	100	97.263	Cavia_porcellus
ENSSBOG00000021014	XRN2	100	99.158	ENSCATG00000040350	XRN2	100	99.158	Cercocebus_atys
ENSSBOG00000021014	XRN2	100	97.579	ENSCLAG00000013419	XRN2	100	97.579	Chinchilla_lanigera
ENSSBOG00000021014	XRN2	100	99.158	ENSCSAG00000011094	XRN2	100	99.158	Chlorocebus_sabaeus
ENSSBOG00000021014	XRN2	68	98.925	ENSCHOG00000013404	XRN2	70	98.925	Choloepus_hoffmanni
ENSSBOG00000021014	XRN2	100	84.479	ENSCPBG00000023533	XRN2	100	85.104	Chrysemys_picta_bellii
ENSSBOG00000021014	XRN2	86	60.335	ENSCING00000022336	-	100	60.693	Ciona_intestinalis
ENSSBOG00000021014	XRN2	98	53.003	ENSCSAVG00000011217	-	100	61.597	Ciona_savignyi
ENSSBOG00000021014	XRN2	100	99.158	ENSCANG00000040240	XRN2	100	99.158	Colobus_angolensis_palliatus
ENSSBOG00000021014	XRN2	98	96.555	ENSCGRG00001010676	Xrn2	99	96.555	Cricetulus_griseus_chok1gshd
ENSSBOG00000021014	XRN2	97	95.685	ENSCGRG00000006378	Xrn2	99	95.685	Cricetulus_griseus_crigri
ENSSBOG00000021014	XRN2	54	72.157	ENSCSEG00000005628	xrn2	100	72.157	Cynoglossus_semilaevis
ENSSBOG00000021014	XRN2	89	71.494	ENSCVAG00000018999	xrn2	98	76.762	Cyprinodon_variegatus
ENSSBOG00000021014	XRN2	100	69.815	ENSDARG00000101900	xrn2	96	77.820	Danio_rerio
ENSSBOG00000021014	XRN2	100	97.053	ENSDNOG00000001895	XRN2	100	97.053	Dasypus_novemcinctus
ENSSBOG00000021014	XRN2	100	95.789	ENSDORG00000005434	Xrn2	100	95.789	Dipodomys_ordii
ENSSBOG00000021014	XRN2	87	56.469	FBgn0031868	Rat1	90	55.582	Drosophila_melanogaster
ENSSBOG00000021014	XRN2	100	83.895	ENSETEG00000001740	XRN2	100	83.895	Echinops_telfairi
ENSSBOG00000021014	XRN2	84	71.636	ENSEBUG00000016136	xrn2	100	71.636	Eptatretus_burgeri
ENSSBOG00000021014	XRN2	100	97.579	ENSEASG00005002484	XRN2	100	97.579	Equus_asinus_asinus
ENSSBOG00000021014	XRN2	99	97.782	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
ENSSBOG00000021014	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSSBOG00000021014	XRN2	100	70.287	ENSELUG00000000552	xrn2	100	70.697	Esox_lucius
ENSSBOG00000021014	XRN2	100	97.789	ENSFCAG00000007970	XRN2	100	97.789	Felis_catus
ENSSBOG00000021014	XRN2	100	82.600	ENSFALG00000004508	XRN2	100	83.019	Ficedula_albicollis
ENSSBOG00000021014	XRN2	100	97.368	ENSFDAG00000016311	XRN2	100	97.368	Fukomys_damarensis
ENSSBOG00000021014	XRN2	54	69.847	ENSFHEG00000013039	xrn2	98	69.847	Fundulus_heteroclitus
ENSSBOG00000021014	XRN2	86	72.783	ENSGMOG00000013436	xrn2	100	72.783	Gadus_morhua
ENSSBOG00000021014	XRN2	100	82.827	ENSGALG00000008372	XRN2	100	82.827	Gallus_gallus
ENSSBOG00000021014	XRN2	89	73.605	ENSGAFG00000014284	xrn2	98	73.605	Gambusia_affinis
ENSSBOG00000021014	XRN2	87	74.760	ENSGACG00000011870	xrn2	100	74.760	Gasterosteus_aculeatus
ENSSBOG00000021014	XRN2	100	84.271	ENSGAGG00000004884	XRN2	100	84.896	Gopherus_agassizii
ENSSBOG00000021014	XRN2	100	99.053	ENSGGOG00000013738	XRN2	100	99.053	Gorilla_gorilla
ENSSBOG00000021014	XRN2	54	74.664	ENSHBUG00000005077	xrn2	96	75.833	Haplochromis_burtoni
ENSSBOG00000021014	XRN2	100	96.211	ENSHGLG00000014831	XRN2	100	96.211	Heterocephalus_glaber_female
ENSSBOG00000021014	XRN2	100	96.211	ENSHGLG00100013130	XRN2	100	96.211	Heterocephalus_glaber_male
ENSSBOG00000021014	XRN2	99	67.915	ENSHCOG00000011994	xrn2	99	68.826	Hippocampus_comes
ENSSBOG00000021014	XRN2	100	70.031	ENSIPUG00000006639	xrn2	100	70.031	Ictalurus_punctatus
ENSSBOG00000021014	XRN2	100	98.211	ENSSTOG00000000589	XRN2	100	98.211	Ictidomys_tridecemlineatus
ENSSBOG00000021014	XRN2	100	97.368	ENSJJAG00000022128	Xrn2	100	97.368	Jaculus_jaculus
ENSSBOG00000021014	XRN2	54	79.492	ENSLBEG00000010041	xrn2	100	79.492	Labrus_bergylta
ENSSBOG00000021014	XRN2	94	77.086	ENSLACG00000008307	XRN2	99	79.755	Latimeria_chalumnae
ENSSBOG00000021014	XRN2	99	72.594	ENSLOCG00000016874	xrn2	100	72.594	Lepisosteus_oculatus
ENSSBOG00000021014	XRN2	100	96.211	ENSLAFG00000014624	XRN2	100	96.211	Loxodonta_africana
ENSSBOG00000021014	XRN2	100	99.158	ENSMFAG00000038122	XRN2	100	99.158	Macaca_fascicularis
ENSSBOG00000021014	XRN2	100	99.158	ENSMMUG00000011405	XRN2	100	99.158	Macaca_mulatta
ENSSBOG00000021014	XRN2	100	99.053	ENSMNEG00000040626	XRN2	100	99.053	Macaca_nemestrina
ENSSBOG00000021014	XRN2	100	99.053	ENSMLEG00000041897	XRN2	100	99.053	Mandrillus_leucophaeus
ENSSBOG00000021014	XRN2	95	72.579	ENSMAMG00000008633	xrn2	98	71.069	Mastacembelus_armatus
ENSSBOG00000021014	XRN2	90	75.607	ENSMZEG00005022362	xrn2	97	75.607	Maylandia_zebra
ENSSBOG00000021014	XRN2	99	81.354	ENSMGAG00000003196	XRN2	99	81.354	Meleagris_gallopavo
ENSSBOG00000021014	XRN2	100	96.632	ENSMAUG00000021842	Xrn2	100	96.632	Mesocricetus_auratus
ENSSBOG00000021014	XRN2	100	97.053	ENSMICG00000008126	XRN2	100	97.053	Microcebus_murinus
ENSSBOG00000021014	XRN2	100	96.105	ENSMOCG00000012588	Xrn2	100	96.105	Microtus_ochrogaster
ENSSBOG00000021014	XRN2	89	73.883	ENSMMOG00000017576	xrn2	96	74.432	Mola_mola
ENSSBOG00000021014	XRN2	100	91.053	ENSMODG00000006163	XRN2	100	91.053	Monodelphis_domestica
ENSSBOG00000021014	XRN2	91	72.247	ENSMALG00000011355	xrn2	95	76.291	Monopterus_albus
ENSSBOG00000021014	XRN2	100	95.373	MGP_CAROLIEiJ_G0024400	Xrn2	100	95.373	Mus_caroli
ENSSBOG00000021014	XRN2	100	95.584	ENSMUSG00000027433	Xrn2	100	95.584	Mus_musculus
ENSSBOG00000021014	XRN2	100	95.373	MGP_PahariEiJ_G0025843	Xrn2	100	95.373	Mus_pahari
ENSSBOG00000021014	XRN2	100	95.584	MGP_SPRETEiJ_G0025318	Xrn2	100	95.584	Mus_spretus
ENSSBOG00000021014	XRN2	100	96.381	ENSMPUG00000001198	XRN2	93	96.381	Mustela_putorius_furo
ENSSBOG00000021014	XRN2	100	97.789	ENSMLUG00000001536	XRN2	100	97.789	Myotis_lucifugus
ENSSBOG00000021014	XRN2	100	97.368	ENSNGAG00000018138	Xrn2	100	97.368	Nannospalax_galili
ENSSBOG00000021014	XRN2	90	75.926	ENSNBRG00000008062	xrn2	97	75.926	Neolamprologus_brichardi
ENSSBOG00000021014	XRN2	100	99.053	ENSNLEG00000009991	XRN2	100	99.053	Nomascus_leucogenys
ENSSBOG00000021014	XRN2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSSBOG00000021014	XRN2	75	78.534	ENSOPRG00000001397	-	77	78.534	Ochotona_princeps
ENSSBOG00000021014	XRN2	100	97.263	ENSODEG00000010745	-	100	97.263	Octodon_degus
ENSSBOG00000021014	XRN2	98	88.242	ENSODEG00000000860	-	99	88.673	Octodon_degus
ENSSBOG00000021014	XRN2	100	71.753	ENSONIG00000018720	xrn2	100	71.959	Oreochromis_niloticus
ENSSBOG00000021014	XRN2	100	90.966	ENSOANG00000015673	XRN2	100	90.966	Ornithorhynchus_anatinus
ENSSBOG00000021014	XRN2	100	98.000	ENSOCUG00000013468	XRN2	100	98.000	Oryctolagus_cuniculus
ENSSBOG00000021014	XRN2	98	70.509	ENSORLG00000017213	xrn2	97	75.289	Oryzias_latipes
ENSSBOG00000021014	XRN2	98	70.509	ENSORLG00020001824	xrn2	100	70.204	Oryzias_latipes_hni
ENSSBOG00000021014	XRN2	98	70.301	ENSORLG00015019747	xrn2	100	70.000	Oryzias_latipes_hsok
ENSSBOG00000021014	XRN2	90	74.335	ENSOMEG00000019820	xrn2	100	69.442	Oryzias_melastigma
ENSSBOG00000021014	XRN2	100	96.951	ENSOGAG00000001068	XRN2	100	96.951	Otolemur_garnettii
ENSSBOG00000021014	XRN2	97	96.112	ENSOARG00000004443	XRN2	100	96.112	Ovis_aries
ENSSBOG00000021014	XRN2	100	99.053	ENSPPAG00000033549	XRN2	100	99.053	Pan_paniscus
ENSSBOG00000021014	XRN2	100	97.789	ENSPPRG00000008732	XRN2	100	97.789	Panthera_pardus
ENSSBOG00000021014	XRN2	97	97.730	ENSPTIG00000015683	XRN2	97	97.730	Panthera_tigris_altaica
ENSSBOG00000021014	XRN2	100	99.053	ENSPTRG00000013308	XRN2	100	99.053	Pan_troglodytes
ENSSBOG00000021014	XRN2	100	99.158	ENSPANG00000018088	XRN2	100	99.158	Papio_anubis
ENSSBOG00000021014	XRN2	100	70.829	ENSPKIG00000016889	xrn2	100	70.829	Paramormyrops_kingsleyae
ENSSBOG00000021014	XRN2	81	87.240	ENSPSIG00000014666	XRN2	100	87.240	Pelodiscus_sinensis
ENSSBOG00000021014	XRN2	100	96.000	ENSPEMG00000000111	Xrn2	100	96.000	Peromyscus_maniculatus_bairdii
ENSSBOG00000021014	XRN2	100	69.886	ENSPFOG00000004182	xrn2	99	70.290	Poecilia_formosa
ENSSBOG00000021014	XRN2	89	74.302	ENSPLAG00000007351	xrn2	96	74.302	Poecilia_latipinna
ENSSBOG00000021014	XRN2	94	68.226	ENSPMEG00000011798	xrn2	99	69.097	Poecilia_mexicana
ENSSBOG00000021014	XRN2	89	74.186	ENSPREG00000012452	xrn2	99	72.615	Poecilia_reticulata
ENSSBOG00000021014	XRN2	100	98.632	ENSPPYG00000010755	XRN2	100	98.632	Pongo_abelii
ENSSBOG00000021014	XRN2	100	91.282	ENSPCAG00000011191	XRN2	100	91.282	Procavia_capensis
ENSSBOG00000021014	XRN2	100	90.842	ENSPCOG00000016468	XRN2	100	90.842	Propithecus_coquereli
ENSSBOG00000021014	XRN2	93	95.137	ENSPVAG00000004596	XRN2	93	95.137	Pteropus_vampyrus
ENSSBOG00000021014	XRN2	90	73.757	ENSPNYG00000001765	xrn2	97	73.757	Pundamilia_nyererei
ENSSBOG00000021014	XRN2	100	71.429	ENSPNAG00000010956	xrn2	99	71.429	Pygocentrus_nattereri
ENSSBOG00000021014	XRN2	100	96.320	ENSRNOG00000011785	Xrn2	100	96.320	Rattus_norvegicus
ENSSBOG00000021014	XRN2	86	99.144	ENSRBIG00000036193	XRN2	100	99.144	Rhinopithecus_bieti
ENSSBOG00000021014	XRN2	100	99.158	ENSRROG00000044400	XRN2	90	99.158	Rhinopithecus_roxellana
ENSSBOG00000021014	XRN2	77	48.069	YOR048C	RAT1	63	53.606	Saccharomyces_cerevisiae
ENSSBOG00000021014	XRN2	100	71.827	ENSSFOG00015001091	xrn2	100	71.827	Scleropages_formosus
ENSSBOG00000021014	XRN2	92	72.912	ENSSMAG00000007834	xrn2	100	68.592	Scophthalmus_maximus
ENSSBOG00000021014	XRN2	91	72.059	ENSSDUG00000012802	xrn2	99	72.398	Seriola_dumerili
ENSSBOG00000021014	XRN2	93	73.672	ENSSLDG00000021273	xrn2	100	73.672	Seriola_lalandi_dorsalis
ENSSBOG00000021014	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSSBOG00000021014	XRN2	98	79.487	ENSSPUG00000005485	XRN2	96	79.594	Sphenodon_punctatus
ENSSBOG00000021014	XRN2	100	70.522	ENSSPAG00000016027	xrn2	99	70.522	Stegastes_partitus
ENSSBOG00000021014	XRN2	100	95.579	ENSSSCG00000007109	XRN2	100	95.579	Sus_scrofa
ENSSBOG00000021014	XRN2	100	81.420	ENSTGUG00000007535	XRN2	100	81.837	Taeniopygia_guttata
ENSSBOG00000021014	XRN2	100	68.214	ENSTRUG00000015489	xrn2	100	68.586	Takifugu_rubripes
ENSSBOG00000021014	XRN2	100	71.340	ENSTNIG00000010712	xrn2	100	71.340	Tetraodon_nigroviridis
ENSSBOG00000021014	XRN2	100	97.053	ENSTBEG00000004119	XRN2	100	97.053	Tupaia_belangeri
ENSSBOG00000021014	XRN2	93	97.658	ENSTTRG00000009087	XRN2	93	97.658	Tursiops_truncatus
ENSSBOG00000021014	XRN2	100	98.211	ENSUAMG00000024634	XRN2	100	98.211	Ursus_americanus
ENSSBOG00000021014	XRN2	97	97.946	ENSUMAG00000004012	XRN2	95	97.946	Ursus_maritimus
ENSSBOG00000021014	XRN2	89	89.586	ENSVPAG00000010694	XRN2	91	89.586	Vicugna_pacos
ENSSBOG00000021014	XRN2	100	98.105	ENSVVUG00000012178	XRN2	100	98.105	Vulpes_vulpes
ENSSBOG00000021014	XRN2	100	74.583	ENSXETG00000023501	xrn2	100	75.208	Xenopus_tropicalis
ENSSBOG00000021014	XRN2	100	68.345	ENSXMAG00000000242	xrn2	92	78.832	Xiphophorus_maculatus