EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000021022 (Gene tree)
Gene ID: 101040368
Gene Symbol: ARL5C
Alias: ARL12
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 7523 bases
Position: chrJH378149.1:252963-260485
Accession: 31111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000008214	MMR_HSR1	PF01926.23	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000024972	ARL5C-201	519	XM_003931476	ENSSBOP00000008214	172 (aa)	XP_003931525	A0A2K6SLE9

Gene Model

Click here to download ENSSBOG00000021022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000021022's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000021022	ARL5C	98	64.740	ENSSBOG00000029492	ARL5B	97	64.740
ENSSBOG00000021022	ARL5C	90	43.038	ENSSBOG00000024352	-	90	42.945
ENSSBOG00000021022	ARL5C	90	39.241	ENSSBOG00000016897	ARL2-SNX15	86	39.241
ENSSBOG00000021022	ARL5C	92	34.884	ENSSBOG00000021962	ARFRP1	89	36.111
ENSSBOG00000021022	ARL5C	99	41.477	ENSSBOG00000030557	-	97	41.477
ENSSBOG00000021022	ARL5C	96	62.130	ENSSBOG00000034323	ARL5A	94	62.130
ENSSBOG00000021022	ARL5C	96	36.571	ENSSBOG00000031045	ARL6	94	36.571
ENSSBOG00000021022	ARL5C	97	39.535	ENSSBOG00000020707	ARF4	96	39.535
ENSSBOG00000021022	ARL5C	86	35.443	ENSSBOG00000016320	ARL4D	80	35.000
ENSSBOG00000021022	ARL5C	83	37.255	ENSSBOG00000033162	ARL4C	76	37.255
ENSSBOG00000021022	ARL5C	92	40.491	ENSSBOG00000021669	ARF5	91	40.491
ENSSBOG00000021022	ARL5C	92	37.278	ENSSBOG00000036387	ARL4A	85	37.278
ENSSBOG00000021022	ARL5C	94	37.427	ENSSBOG00000030806	ARL3	78	38.012
ENSSBOG00000021022	ARL5C	95	42.262	ENSSBOG00000021606	-	93	42.262

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000021022	ARL5C	100	69.318	ENSAMEG00000004195	ARL5C	98	69.318	Ailuropoda_melanoleuca
ENSSBOG00000021022	ARL5C	98	72.093	ENSACAG00000003879	-	96	72.093	Anolis_carolinensis
ENSSBOG00000021022	ARL5C	98	76.163	ENSCAFG00000016525	ARL5C	96	76.163	Canis_familiaris
ENSSBOG00000021022	ARL5C	100	76.136	ENSCHIG00000008208	ARL5C	98	76.136	Capra_hircus
ENSSBOG00000021022	ARL5C	59	73.585	ENSCHOG00000013232	-	100	73.585	Choloepus_hoffmanni
ENSSBOG00000021022	ARL5C	100	68.750	ENSCGRG00001000695	Arl5c	99	68.750	Cricetulus_griseus_chok1gshd
ENSSBOG00000021022	ARL5C	100	69.143	ENSCGRG00000007376	Arl5c	99	69.143	Cricetulus_griseus_crigri
ENSSBOG00000021022	ARL5C	98	76.744	ENSDNOG00000019741	ARL5C	96	76.744	Dasypus_novemcinctus
ENSSBOG00000021022	ARL5C	100	73.295	ENSDORG00000016304	Arl5c	98	73.295	Dipodomys_ordii
ENSSBOG00000021022	ARL5C	89	77.707	ENSEASG00005001922	ARL5C	73	77.707	Equus_asinus_asinus
ENSSBOG00000021022	ARL5C	98	76.744	ENSECAG00000009024	ARL5C	96	76.744	Equus_caballus
ENSSBOG00000021022	ARL5C	99	74.857	ENSFCAG00000009962	ARL5C	98	74.857	Felis_catus
ENSSBOG00000021022	ARL5C	100	77.273	ENSSTOG00000011104	ARL5C	98	77.273	Ictidomys_tridecemlineatus
ENSSBOG00000021022	ARL5C	98	68.023	ENSLACG00000015332	ARL5C	96	68.023	Latimeria_chalumnae
ENSSBOG00000021022	ARL5C	98	78.488	ENSLAFG00000018248	ARL5C	96	78.488	Loxodonta_africana
ENSSBOG00000021022	ARL5C	98	68.605	ENSMAUG00000012845	Arl5c	85	68.605	Mesocricetus_auratus
ENSSBOG00000021022	ARL5C	98	77.326	ENSMICG00000002661	ARL5C	96	77.326	Microcebus_murinus
ENSSBOG00000021022	ARL5C	98	69.767	ENSMOCG00000000234	Arl5c	96	69.767	Microtus_ochrogaster
ENSSBOG00000021022	ARL5C	100	75.568	MGP_CAROLIEiJ_G0017071	Arl5c	98	75.568	Mus_caroli
ENSSBOG00000021022	ARL5C	100	76.136	ENSMUSG00000038352	Arl5c	98	76.136	Mus_musculus
ENSSBOG00000021022	ARL5C	100	75.568	MGP_PahariEiJ_G0018200	Arl5c	98	75.568	Mus_pahari
ENSSBOG00000021022	ARL5C	100	76.705	MGP_SPRETEiJ_G0017917	Arl5c	98	76.705	Mus_spretus
ENSSBOG00000021022	ARL5C	98	75.581	ENSMLUG00000030149	ARL5C	96	75.581	Myotis_lucifugus
ENSSBOG00000021022	ARL5C	98	76.163	ENSOGAG00000005894	ARL5C	96	76.163	Otolemur_garnettii
ENSSBOG00000021022	ARL5C	100	76.136	ENSOARG00000010377	ARL5C	98	76.136	Ovis_aries
ENSSBOG00000021022	ARL5C	99	74.857	ENSPPRG00000000975	ARL5C	98	74.857	Panthera_pardus
ENSSBOG00000021022	ARL5C	99	74.857	ENSPTIG00000017487	ARL5C	98	74.857	Panthera_tigris_altaica
ENSSBOG00000021022	ARL5C	100	74.432	ENSPEMG00000008932	Arl5c	98	74.432	Peromyscus_maniculatus_bairdii
ENSSBOG00000021022	ARL5C	98	77.907	ENSPCOG00000028489	ARL5C	96	77.907	Propithecus_coquereli
ENSSBOG00000021022	ARL5C	95	75.449	ENSPVAG00000008495	ARL5C	98	75.449	Pteropus_vampyrus
ENSSBOG00000021022	ARL5C	98	76.163	ENSRNOG00000036880	Arl5c	96	76.163	Rattus_norvegicus
ENSSBOG00000021022	ARL5C	93	71.951	ENSSPUG00000007555	ARL5C	99	70.552	Sphenodon_punctatus
ENSSBOG00000021022	ARL5C	98	75.000	ENSTBEG00000007274	ARL5C	96	75.000	Tupaia_belangeri
ENSSBOG00000021022	ARL5C	100	73.864	ENSUAMG00000012299	ARL5C	98	73.864	Ursus_americanus
ENSSBOG00000021022	ARL5C	100	73.864	ENSUMAG00000017197	ARL5C	98	73.864	Ursus_maritimus
ENSSBOG00000021022	ARL5C	98	67.442	ENSXETG00000023713	arl5c	89	67.442	Xenopus_tropicalis